RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 MBTPS1Q14703 1052 aa11.01□□□□□ -0.65
YBX3-210ENST00000540975 WNT8BQ93098 351 aa11.01□□□□□ -0.65
YBX3-210ENST00000540975 OSGEPQ9NPF4 335 aa11□□□□□ -0.65
YBX3-210ENST00000540975 NLRP2Q9NX02 1062 aa11□□□□□ -0.65
YBX3-210ENST00000540975 KCNK4Q9NYG8 393 aa11□□□□□ -0.65
YBX3-210ENST00000540975 IKBKEQ14164 716 aa10.99□□□□□ -0.65
YBX3-210ENST00000540975 HGSNATQ68CP4 663 aa10.99□□□□□ -0.65
YBX3-210ENST00000540975 PI16Q6UXB8 463 aa10.99□□□□□ -0.65
YBX3-210ENST00000540975 TMEM130Q8N3G9 435 aa10.99□□□□□ -0.65
YBX3-210ENST00000540975 SLC7A3Q8WY07 619 aa10.99□□□□□ -0.65
YBX3-210ENST00000540975 MRPL18Q9H0U6 180 aaKnown RBP10.99□□□□□ -0.65
YBX3-210ENST00000540975 SUZ12Q15022 739 aaKnown RBP10.98□□□□□ -0.65
YBX3-210ENST00000540975 WFDC12Q8WWY7 111 aa10.98□□□□□ -0.65
YBX3-210ENST00000540975 WWC3Q9ULE0 1092 aa10.98□□□□□ -0.65
YBX3-210ENST00000540975 ANKRD33BA6NCL7 494 aa10.97□□□□□ -0.65
YBX3-210ENST00000540975 DDX3YO15523 660 aaKnown RBP10.97□□□□□ -0.65
YBX3-210ENST00000540975 ESRRAP11474 423 aaPredicted RBP10.97□□□□□ -0.65
YBX3-210ENST00000540975 ARL4DP49703 201 aa10.97□□□□□ -0.65
YBX3-210ENST00000540975 GRM2Q14416 872 aa10.97□□□□□ -0.65
YBX3-210ENST00000540975 FOXD4L6Q3SYB3 417 aaPredicted RBP10.97□□□□□ -0.65
YBX3-210ENST00000540975 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.97□□□□□ -0.65
YBX3-210ENST00000540975 FOXD4L3Q6VB84 417 aaPredicted RBP10.97□□□□□ -0.65
YBX3-210ENST00000540975 TXNRD3Q86VQ6 643 aa10.97□□□□□ -0.65
YBX3-210ENST00000540975 GLIS3Q8NEA6 775 aa10.97□□□□□ -0.65
YBX3-210ENST00000540975 P4HBP07237 508 aaKnown RBP10.96□□□□□ -0.65
YBX3-210ENST00000540975 IREB2P48200 963 aaKnown RBP10.96□□□□□ -0.65
YBX3-210ENST00000540975 C19orf57Q0VDD7 668 aa10.96□□□□□ -0.65
YBX3-210ENST00000540975 SETDB2Q96T68 719 aa10.96□□□□□ -0.65
YBX3-210ENST00000540975 CLEC4MQ9H2X3 399 aaPredicted RBP10.96□□□□□ -0.65
YBX3-210ENST00000540975 TMEM238LA0A1B0GVL6 79 aa10.95□□□□□ -0.66
YBX3-210ENST00000540975 ALX3O95076 343 aa10.95□□□□□ -0.66
YBX3-210ENST00000540975 ITPKAP23677 461 aa10.95□□□□□ -0.66
YBX3-210ENST00000540975 NOS3P29474 1203 aa10.95□□□□□ -0.66
YBX3-210ENST00000540975 ZNF423Q2M1K9 1284 aa10.95□□□□□ -0.66
YBX3-210ENST00000540975 ALG1LQ6GMV1 187 aa10.95□□□□□ -0.66
YBX3-210ENST00000540975 PRPF40BQ6NWY9 871 aaKnown RBP10.95□□□□□ -0.66
YBX3-210ENST00000540975 BCO2Q9BYV7 579 aa10.95□□□□□ -0.66
YBX3-210ENST00000540975 ABCB6Q9NP58 842 aa10.95□□□□□ -0.66
YBX3-210ENST00000540975 PPP4R2Q9NY27 417 aa10.95□□□□□ -0.66
YBX3-210ENST00000540975 TRAK1Q9UPV9 953 aa10.95□□□□□ -0.66
YBX3-210ENST00000540975 F8W735 103 aaPredicted RBP10.94□□□□□ -0.66
YBX3-210ENST00000540975 ADAM11O75078 769 aa10.94□□□□□ -0.66
YBX3-210ENST00000540975 PCDH1Q08174 1060 aa10.94□□□□□ -0.66
YBX3-210ENST00000540975 DOC2BQ14184 412 aa10.94□□□□□ -0.66
YBX3-210ENST00000540975 DNAJC14Q6Y2X3 702 aaPredicted RBP10.94□□□□□ -0.66
YBX3-210ENST00000540975 FBF1Q8TES7 1133 aa10.94□□□□□ -0.66
YBX3-210ENST00000540975 FOXD4L4Q8WXT5 416 aaPredicted RBP10.94□□□□□ -0.66
YBX3-210ENST00000540975 SOX17Q9H6I2 414 aaPredicted RBP10.94□□□□□ -0.66
YBX3-210ENST00000540975 AKTIPQ9H8T0 292 aa10.94□□□□□ -0.66
YBX3-210ENST00000540975 WISP1O95388 367 aa10.93□□□□□ -0.66
YBX3-210ENST00000540975 PTPN12Q05209 780 aaKnown RBP10.93□□□□□ -0.66
YBX3-210ENST00000540975 COL19A1Q14993 1142 aa10.93□□□□□ -0.66
YBX3-210ENST00000540975 DUOXA2Q1HG44 320 aa10.93□□□□□ -0.66
YBX3-210ENST00000540975 ZBTB7CA1YPR0 619 aa10.92□□□□□ -0.66
YBX3-210ENST00000540975 ATP2B2Q01814 1243 aa10.92□□□□□ -0.66
YBX3-210ENST00000540975 CCDC27Q2M243 656 aa10.92□□□□□ -0.66
YBX3-210ENST00000540975 NXPE4Q6UWF7 544 aa10.92□□□□□ -0.66
YBX3-210ENST00000540975 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.92□□□□□ -0.66
YBX3-210ENST00000540975 ZNF576Q9H609 170 aa10.92□□□□□ -0.66
YBX3-210ENST00000540975 LDHBP07195 334 aaKnown RBP10.91□□□□□ -0.66
YBX3-210ENST00000540975 NLRP12P59046 1061 aa10.91□□□□□ -0.66
YBX3-210ENST00000540975 KIAA1211Q6ZU35 1233 aa10.91□□□□□ -0.66
YBX3-210ENST00000540975 TPSG1Q9NRR2 321 aa10.91□□□□□ -0.66
YBX3-210ENST00000540975 FCGRTP55899 365 aa10.9□□□□□ -0.66
YBX3-210ENST00000540975 GSTM4Q03013 218 aa10.9□□□□□ -0.66
YBX3-210ENST00000540975 ACAD11Q709F0 780 aa10.9□□□□□ -0.66
YBX3-210ENST00000540975 AGGF1Q8N302 714 aaeCLIP10.9□□□□□ -0.66
YBX3-210ENST00000540975 SSBP4Q9BWG4 385 aaPredicted RBP10.9□□□□□ -0.66
YBX3-210ENST00000540975 RPS26P11Q5JNZ5 115 aaPredicted RBP10.89□□□□□ -0.67
YBX3-210ENST00000540975 DTHD1Q6ZMT9 781 aa10.89□□□□□ -0.67
YBX3-210ENST00000540975 UBASH3BQ8TF42 649 aa10.89□□□□□ -0.67
YBX3-210ENST00000540975 OSBPL7Q9BZF2 842 aa10.89□□□□□ -0.67
YBX3-210ENST00000540975 EIF4EBP3O60516 100 aaPredicted RBP10.88□□□□□ -0.67
YBX3-210ENST00000540975 B3GALT4O96024 378 aa10.88□□□□□ -0.67
YBX3-210ENST00000540975 FURINP09958 794 aa10.88□□□□□ -0.67
YBX3-210ENST00000540975 EAPPQ56P03 285 aaPredicted RBP10.88□□□□□ -0.67
YBX3-210ENST00000540975 NPAS4Q8IUM7 802 aa10.88□□□□□ -0.67
YBX3-210ENST00000540975 MEGF10Q96KG7 1140 aa10.88□□□□□ -0.67
YBX3-210ENST00000540975 ZFYVE1Q9HBF4 777 aa10.88□□□□□ -0.67
YBX3-210ENST00000540975 GIPC1O14908 333 aa10.87□□□□□ -0.67
YBX3-210ENST00000540975 XRCC5P13010 732 aaKnown RBP10.87□□□□□ -0.67
YBX3-210ENST00000540975 Q6ZS46 218 aa10.87□□□□□ -0.67
YBX3-210ENST00000540975 DZIP1LQ8IYY4 767 aaKnown RBP10.87□□□□□ -0.67
YBX3-210ENST00000540975 FAAP100Q0VG06 881 aa10.85□□□□□ -0.67
YBX3-210ENST00000540975 TP53INP1Q96A56 240 aa10.85□□□□□ -0.67
YBX3-210ENST00000540975 USP26Q9BXU7 913 aa10.85□□□□□ -0.67
YBX3-210ENST00000540975 SRCIN1Q9C0H9 1055 aa10.85□□□□□ -0.67
YBX3-210ENST00000540975 SPG7Q9UQ90 795 aa10.85□□□□□ -0.67
YBX3-210ENST00000540975 LOC100289279A0A1B0GTE1 492 aa10.84□□□□□ -0.67
YBX3-210ENST00000540975 MEGF11A6BM72 1044 aa10.84□□□□□ -0.67
YBX3-210ENST00000540975 PRPF40AO75400 957 aaKnown RBP10.84□□□□□ -0.67
YBX3-210ENST00000540975 GLB1P16278 677 aa10.84□□□□□ -0.67
YBX3-210ENST00000540975 ERCC3P19447 782 aa10.84□□□□□ -0.67
YBX3-210ENST00000540975 ZNF157P51786 506 aaPredicted RBP10.84□□□□□ -0.67
YBX3-210ENST00000540975 NKAPLQ5M9Q1 402 aa10.84□□□□□ -0.67
YBX3-210ENST00000540975 DDX54Q8TDD1 881 aaKnown RBP10.84□□□□□ -0.67
YBX3-210ENST00000540975 FRMD6Q96NE9 622 aa10.84□□□□□ -0.67
YBX3-210ENST00000540975 UBL7Q96S82 380 aaPredicted RBP10.84□□□□□ -0.67
YBX3-210ENST00000540975 RUSC1Q9BVN2 902 aa10.84□□□□□ -0.67
YBX3-210ENST00000540975 NRSN2Q9GZP1 204 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms