RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 AK7Q96M32 723 aa13.34□□□□□ -0.27
LGR5-203ENST00000540815 ELP1O95163 1332 aa13.34□□□□□ -0.27
LGR5-203ENST00000540815 ZAP70P43403 619 aa13.34□□□□□ -0.27
LGR5-203ENST00000540815 INTS5Q6P9B9 1019 aaKnown RBP13.34□□□□□ -0.27
LGR5-203ENST00000540815 MARCH10Q8NA82 808 aaPredicted RBP13.34□□□□□ -0.27
LGR5-203ENST00000540815 CNNM1Q9NRU3 951 aa13.34□□□□□ -0.27
LGR5-203ENST00000540815 MYH14Q7Z406 1995 aaKnown RBP13.33□□□□□ -0.28
LGR5-203ENST00000540815 SCRN1Q12765 414 aa13.33□□□□□ -0.28
LGR5-203ENST00000540815 MTERF4Q7Z6M4 381 aaKnown RBP13.33□□□□□ -0.28
LGR5-203ENST00000540815 APPBP2Q92624 585 aa13.33□□□□□ -0.28
LGR5-203ENST00000540815 ACSBG1Q96GR2 724 aa13.33□□□□□ -0.28
LGR5-203ENST00000540815 LRRC2Q9BYS8 371 aa13.33□□□□□ -0.28
LGR5-203ENST00000540815 CTNNA3Q9UI47 895 aa13.33□□□□□ -0.28
LGR5-203ENST00000540815 JAK2O60674 1132 aa13.33□□□□□ -0.28
LGR5-203ENST00000540815 EIF5P55010 431 aaKnown RBP13.33□□□□□ -0.28
LGR5-203ENST00000540815 DDB1Q16531 1140 aa13.33□□□□□ -0.28
LGR5-203ENST00000540815 SMARCC2Q8TAQ2 1214 aa13.33□□□□□ -0.28
LGR5-203ENST00000540815 ZNF771Q7L3S4 317 aaPredicted RBP13.32□□□□□ -0.28
LGR5-203ENST00000540815 TRERF1Q96PN7 1200 aa13.32□□□□□ -0.28
LGR5-203ENST00000540815 WASHC4Q2M389 1173 aa13.32□□□□□ -0.28
LGR5-203ENST00000540815 FERMT3Q86UX7 667 aa13.32□□□□□ -0.28
LGR5-203ENST00000540815 FBXL16Q8N461 479 aa13.32□□□□□ -0.28
LGR5-203ENST00000540815 CCDC87Q9NVE4 849 aa13.32□□□□□ -0.28
LGR5-203ENST00000540815 PDE8BO95263 885 aa13.31□□□□□ -0.28
LGR5-203ENST00000540815 MCAMP43121 646 aa13.31□□□□□ -0.28
LGR5-203ENST00000540815 ITPK1Q13572 414 aa13.31□□□□□ -0.28
LGR5-203ENST00000540815 TTLL5Q6EMB2 1281 aa13.31□□□□□ -0.28
LGR5-203ENST00000540815 TTC6Q86TZ1 520 aa13.31□□□□□ -0.28
LGR5-203ENST00000540815 FAM184AQ8NB25 1140 aa13.31□□□□□ -0.28
LGR5-203ENST00000540815 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.31□□□□□ -0.28
LGR5-203ENST00000540815 MYH15Q9Y2K3 1946 aa13.31□□□□□ -0.28
LGR5-203ENST00000540815 MYO5AQ9Y4I1 1855 aaKnown RBP13.31□□□□□ -0.28
LGR5-203ENST00000540815 DDX60Q8IY21 1712 aaKnown RBP13.31□□□□□ -0.28
LGR5-203ENST00000540815 ATRNO75882 1429 aa13.31□□□□□ -0.28
LGR5-203ENST00000540815 APOBRQ0VD83 1088 aa13.31□□□□□ -0.28
LGR5-203ENST00000540815 ZSCAN25Q6NSZ9 544 aa13.31□□□□□ -0.28
LGR5-203ENST00000540815 PDCL2Q8N4E4 241 aa13.31□□□□□ -0.28
LGR5-203ENST00000540815 LAMB2P55268 1798 aa13.31□□□□□ -0.28
LGR5-203ENST00000540815 SPATA31A5Q5VU36 1347 aa13.31□□□□□ -0.28
LGR5-203ENST00000540815 SPATA31A7Q8IWB4 1347 aa13.31□□□□□ -0.28
LGR5-203ENST00000540815 CRKLP46109 303 aaKnown RBP13.31□□□□□ -0.28
LGR5-203ENST00000540815 TTF1Q15361 905 aaPredicted RBP13.31□□□□□ -0.28
LGR5-203ENST00000540815 IMMTQ16891 758 aaKnown RBP13.31□□□□□ -0.28
LGR5-203ENST00000540815 SCAND2PQ9GZW5 306 aaPredicted RBP13.31□□□□□ -0.28
LGR5-203ENST00000540815 KIF3AQ9Y496 699 aa13.31□□□□□ -0.28
LGR5-203ENST00000540815 MROH5Q6ZUA9 1318 aa13.3□□□□□ -0.28
LGR5-203ENST00000540815 RESTQ13127 1097 aa13.3□□□□□ -0.28
LGR5-203ENST00000540815 UVSSAQ2YD98 709 aa13.3□□□□□ -0.28
LGR5-203ENST00000540815 SPC24Q8NBT2 197 aa13.3□□□□□ -0.28
LGR5-203ENST00000540815 NSUN7Q8NE18 718 aaKnown RBP13.3□□□□□ -0.28
LGR5-203ENST00000540815 CHMP4CQ96CF2 233 aa13.3□□□□□ -0.28
LGR5-203ENST00000540815 ZNF274Q96GC6 653 aaPredicted RBP13.3□□□□□ -0.28
LGR5-203ENST00000540815 PUS7LQ9H0K6 701 aaKnown RBP13.3□□□□□ -0.28
LGR5-203ENST00000540815 ARID4AP29374 1257 aaPredicted RBP13.3□□□□□ -0.28
LGR5-203ENST00000540815 ADD2P35612 726 aa13.3□□□□□ -0.28
LGR5-203ENST00000540815 ATP6V1AP38606 617 aa13.3□□□□□ -0.28
LGR5-203ENST00000540815 HMGN5P82970 282 aaKnown RBP13.3□□□□□ -0.28
LGR5-203ENST00000540815 SUSD4Q5VX71 490 aa13.3□□□□□ -0.28
LGR5-203ENST00000540815 FAM173BQ6P4H8 233 aa13.3□□□□□ -0.28
LGR5-203ENST00000540815 ZSCAN16Q9H4T2 348 aaPredicted RBP13.3□□□□□ -0.28
LGR5-203ENST00000540815 A0A0G2JS52 829 aa13.29□□□□□ -0.28
LGR5-203ENST00000540815 NUTM2BA6NNL0 878 aaPredicted RBP13.29□□□□□ -0.28
LGR5-203ENST00000540815 NUTM2EB1AL46 878 aaPredicted RBP13.29□□□□□ -0.28
LGR5-203ENST00000540815 FGAP02671 866 aa13.29□□□□□ -0.28
LGR5-203ENST00000540815 PUM3Q15397 648 aaKnown RBP13.29□□□□□ -0.28
LGR5-203ENST00000540815 NUTM2AQ8IVF1 878 aaPredicted RBP13.29□□□□□ -0.28
LGR5-203ENST00000540815 LOC102724428A0A0B4J2F2 783 aa13.29□□□□□ -0.28
LGR5-203ENST00000540815 H3BQV1 296 aa13.29□□□□□ -0.28
LGR5-203ENST00000540815 RIOK3O14730 519 aaKnown RBP13.29□□□□□ -0.28
LGR5-203ENST00000540815 GPAA1O43292 621 aa13.29□□□□□ -0.28
LGR5-203ENST00000540815 CAMTA2O94983 1202 aa13.29□□□□□ -0.28
LGR5-203ENST00000540815 CTDNEP1O95476 244 aa13.29□□□□□ -0.28
LGR5-203ENST00000540815 UQCRFS1P1P0C7P4 283 aa13.29□□□□□ -0.28
LGR5-203ENST00000540815 FGFR2P21802 821 aa13.29□□□□□ -0.28
LGR5-203ENST00000540815 SIK1P57059 783 aa13.29□□□□□ -0.28
LGR5-203ENST00000540815 EVCP57679 992 aa13.29□□□□□ -0.28
LGR5-203ENST00000540815 IFFO2Q5TF58 517 aa13.29□□□□□ -0.28
LGR5-203ENST00000540815 CERS3Q8IU89 383 aa13.29□□□□□ -0.28
LGR5-203ENST00000540815 DDX11Q96FC9 970 aa13.29□□□□□ -0.28
LGR5-203ENST00000540815 HCLS1P14317 486 aaPredicted RBP13.28□□□□□ -0.28
LGR5-203ENST00000540815 PDIA3P30101 505 aaKnown RBP13.28□□□□□ -0.28
LGR5-203ENST00000540815 PARP10Q53GL7 1025 aa13.28□□□□□ -0.28
LGR5-203ENST00000540815 CCDC102BQ68D86 513 aa13.28□□□□□ -0.28
LGR5-203ENST00000540815 NAA16Q6N069 864 aaPredicted RBP13.28□□□□□ -0.28
LGR5-203ENST00000540815 BARGINQ6ZT62 677 aa13.28□□□□□ -0.28
LGR5-203ENST00000540815 LPIN2Q92539 896 aa13.28□□□□□ -0.28
LGR5-203ENST00000540815 SPATA32Q96LK8 384 aa13.28□□□□□ -0.28
LGR5-203ENST00000540815 FUCA2Q9BTY2 467 aa13.28□□□□□ -0.28
LGR5-203ENST00000540815 UTP14AQ9BVJ6 771 aaKnown RBP13.28□□□□□ -0.28
LGR5-203ENST00000540815 SALL1Q9NSC2 1324 aa13.28□□□□□ -0.28
LGR5-203ENST00000540815 COL5A3P25940 1745 aaPredicted RBP13.28□□□□□ -0.28
LGR5-203ENST00000540815 PTPDC1A2A3K4 754 aa13.28□□□□□ -0.28
LGR5-203ENST00000540815 LEO1Q8WVC0 666 aaPredicted RBP13.28□□□□□ -0.28
LGR5-203ENST00000540815 DOCK2Q92608 1830 aa13.28□□□□□ -0.28
LGR5-203ENST00000540815 BCORQ6W2J9 1755 aa13.28□□□□□ -0.28
LGR5-203ENST00000540815 COL4A1P02462 1669 aa13.27□□□□□ -0.28
LGR5-203ENST00000540815 ZNF831Q5JPB2 1677 aa13.27□□□□□ -0.28
LGR5-203ENST00000540815 KCNQ2O43526 872 aa13.27□□□□□ -0.28
LGR5-203ENST00000540815 ADCY5O95622 1261 aa13.27□□□□□ -0.28
LGR5-203ENST00000540815 PHKA1P46020 1223 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms