RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 KIAA0825Q8IV33 1275 aa12.98□□□□□ -0.33
CDCA3-208ENST00000540683 MTMR14Q8NCE2 650 aa12.98□□□□□ -0.33
CDCA3-208ENST00000540683 CDCA5Q96FF9 252 aa12.98□□□□□ -0.33
CDCA3-208ENST00000540683 U3KPZ7 1027 aaPredicted RBP12.98□□□□□ -0.33
CDCA3-208ENST00000540683 POLR2AP24928 1970 aaKnown RBP12.98□□□□□ -0.33
CDCA3-208ENST00000540683 MAST3O60307 1309 aa12.97□□□□□ -0.33
CDCA3-208ENST00000540683 UNCXA6NJT0 531 aa12.97□□□□□ -0.33
CDCA3-208ENST00000540683 WNT10BO00744 389 aa12.97□□□□□ -0.33
CDCA3-208ENST00000540683 FOXN1O15353 648 aa12.97□□□□□ -0.33
CDCA3-208ENST00000540683 GNAI3P08754 354 aa12.97□□□□□ -0.33
CDCA3-208ENST00000540683 EPHA10Q5JZY3 1008 aa12.97□□□□□ -0.33
CDCA3-208ENST00000540683 COL13A1Q5TAT6 717 aaPredicted RBP12.97□□□□□ -0.33
CDCA3-208ENST00000540683 DIEXFQ68CQ4 756 aaKnown RBP12.97□□□□□ -0.33
CDCA3-208ENST00000540683 ARMC9Q7Z3E5 817 aa12.97□□□□□ -0.33
CDCA3-208ENST00000540683 TXNRD3Q86VQ6 643 aa12.97□□□□□ -0.33
CDCA3-208ENST00000540683 POTEDQ86YR6 584 aa12.97□□□□□ -0.33
CDCA3-208ENST00000540683 HELBQ8NG08 1087 aaPredicted RBP12.97□□□□□ -0.33
CDCA3-208ENST00000540683 USP44Q9H0E7 712 aa12.97□□□□□ -0.33
CDCA3-208ENST00000540683 PAPPA2Q9BXP8 1791 aa12.97□□□□□ -0.33
CDCA3-208ENST00000540683 FAM205AQ6ZU69 1335 aa12.96□□□□□ -0.33
CDCA3-208ENST00000540683 ADM5C9JUS6 153 aa12.96□□□□□ -0.33
CDCA3-208ENST00000540683 PDE8BO95263 885 aa12.96□□□□□ -0.33
CDCA3-208ENST00000540683 EGFRP00533 1210 aa12.96□□□□□ -0.33
CDCA3-208ENST00000540683 TTLL12Q14166 644 aaPredicted RBP12.96□□□□□ -0.33
CDCA3-208ENST00000540683 PUM3Q15397 648 aaKnown RBP12.96□□□□□ -0.33
CDCA3-208ENST00000540683 SUPT20HL1Q3ZLR7 823 aa12.96□□□□□ -0.33
CDCA3-208ENST00000540683 CDCA7LQ96GN5 454 aa12.96□□□□□ -0.33
CDCA3-208ENST00000540683 ZNF594Q96JF6 807 aaPredicted RBP12.96□□□□□ -0.33
CDCA3-208ENST00000540683 GNL3LQ9NVN8 582 aaKnown RBP12.96□□□□□ -0.33
CDCA3-208ENST00000540683 SAGE1Q9NXZ1 904 aa12.96□□□□□ -0.33
CDCA3-208ENST00000540683 NOB1Q9ULX3 412 aaKnown RBP12.96□□□□□ -0.33
CDCA3-208ENST00000540683 SUGT1Q9Y2Z0 365 aa12.96□□□□□ -0.33
CDCA3-208ENST00000540683 RIPOR2Q9Y4F9 1068 aa12.96□□□□□ -0.33
CDCA3-208ENST00000540683 A0A1B0GUL6 1792 aa12.95□□□□□ -0.34
CDCA3-208ENST00000540683 PPP1R12BO60237 982 aaPredicted RBP12.95□□□□□ -0.34
CDCA3-208ENST00000540683 CIAO1O76071 339 aa12.95□□□□□ -0.34
CDCA3-208ENST00000540683 SLC5A1P13866 664 aa12.95□□□□□ -0.34
CDCA3-208ENST00000540683 RBM5P52756 815 aaKnown RBP eCLIP12.95□□□□□ -0.34
CDCA3-208ENST00000540683 TDRD7Q8NHU6 1098 aaKnown RBP12.95□□□□□ -0.34
CDCA3-208ENST00000540683 SERPINA10Q9UK55 444 aa12.95□□□□□ -0.34
CDCA3-208ENST00000540683 TNNI2P48788 182 aa12.94□□□□□ -0.34
CDCA3-208ENST00000540683 LBX1P52954 281 aa12.94□□□□□ -0.34
CDCA3-208ENST00000540683 RARSP54136 660 aaKnown RBP12.94□□□□□ -0.34
CDCA3-208ENST00000540683 HDLBPQ00341 1268 aaKnown RBP12.94□□□□□ -0.34
CDCA3-208ENST00000540683 FMR1Q06787 632 aaKnown RBP eCLIP12.94□□□□□ -0.34
CDCA3-208ENST00000540683 NBPF9Q3BBW0 867 aa12.94□□□□□ -0.34
CDCA3-208ENST00000540683 MFSD14BQ5SR56 506 aa12.94□□□□□ -0.34
CDCA3-208ENST00000540683 ANKRD44Q8N8A2 993 aa12.94□□□□□ -0.34
CDCA3-208ENST00000540683 LPIN2Q92539 896 aa12.94□□□□□ -0.34
CDCA3-208ENST00000540683 HOOK2Q96ED9 719 aa12.94□□□□□ -0.34
CDCA3-208ENST00000540683 IRS2Q9Y4H2 1338 aa12.93□□□□□ -0.34
CDCA3-208ENST00000540683 EYA2O00167 538 aa12.93□□□□□ -0.34
CDCA3-208ENST00000540683 KLRK1P26718 216 aa12.93□□□□□ -0.34
CDCA3-208ENST00000540683 INTS3Q68E01 1043 aaKnown RBP12.93□□□□□ -0.34
CDCA3-208ENST00000540683 KAZALD1Q96I82 304 aa12.93□□□□□ -0.34
CDCA3-208ENST00000540683 MRIQ9BWK5 157 aa12.93□□□□□ -0.34
CDCA3-208ENST00000540683 TMOD2Q9NZR1 351 aa12.93□□□□□ -0.34
CDCA3-208ENST00000540683 CEP126Q9P2H0 1117 aa12.93□□□□□ -0.34
CDCA3-208ENST00000540683 ECM29Q5VYK3 1845 aa12.92□□□□□ -0.34
CDCA3-208ENST00000540683 SPDYE2BA6NHP3 402 aa12.92□□□□□ -0.34
CDCA3-208ENST00000540683 WTIPA6NIX2 430 aaPredicted RBP12.92□□□□□ -0.34
CDCA3-208ENST00000540683 AOC2O75106 756 aa12.92□□□□□ -0.34
CDCA3-208ENST00000540683 SLC10A3P09131 477 aa12.92□□□□□ -0.34
CDCA3-208ENST00000540683 SPDYE6P0CI01 402 aa12.92□□□□□ -0.34
CDCA3-208ENST00000540683 HSPA8P11142 646 aaKnown RBP12.92□□□□□ -0.34
CDCA3-208ENST00000540683 IL15P40933 162 aaPredicted RBP12.92□□□□□ -0.34
CDCA3-208ENST00000540683 SREBF2Q12772 1141 aa12.92□□□□□ -0.34
CDCA3-208ENST00000540683 FBXO33Q7Z6M2 555 aa12.92□□□□□ -0.34
CDCA3-208ENST00000540683 ZGPATQ8N5A5 531 aaKnown RBP12.92□□□□□ -0.34
CDCA3-208ENST00000540683 WDR66Q8TBY9 1149 aa12.92□□□□□ -0.34
CDCA3-208ENST00000540683 ZBED3Q96IU2 234 aaPredicted RBP12.92□□□□□ -0.34
CDCA3-208ENST00000540683 FAM84BQ96KN1 310 aaPredicted RBP12.92□□□□□ -0.34
CDCA3-208ENST00000540683 AKAP2Q9Y2D5 859 aa12.92□□□□□ -0.34
CDCA3-208ENST00000540683 SEMA3EO15041 775 aa12.91□□□□□ -0.34
CDCA3-208ENST00000540683 GYG1P46976 350 aa12.91□□□□□ -0.34
CDCA3-208ENST00000540683 INHBEP58166 350 aa12.91□□□□□ -0.34
CDCA3-208ENST00000540683 HNRNPUQ00839 825 aaKnown RBP eCLIP12.91□□□□□ -0.34
CDCA3-208ENST00000540683 CFAP100Q494V2 611 aa12.91□□□□□ -0.34
CDCA3-208ENST00000540683 ATF7IPQ6VMQ6 1270 aa12.91□□□□□ -0.34
CDCA3-208ENST00000540683 MXD3Q9BW11 206 aa12.91□□□□□ -0.34
CDCA3-208ENST00000540683 DEFB129Q9H1M3 183 aa12.91□□□□□ -0.34
CDCA3-208ENST00000540683 TTF2Q9UNY4 1162 aaKnown RBP12.91□□□□□ -0.34
CDCA3-208ENST00000540683 ZNF646O15015 1829 aaPredicted RBP12.9□□□□□ -0.34
CDCA3-208ENST00000540683 AKAP11Q9UKA4 1901 aa12.9□□□□□ -0.34
CDCA3-208ENST00000540683 F8W031 263 aaPredicted RBP12.9□□□□□ -0.34
CDCA3-208ENST00000540683 MS4A1P11836 297 aa12.9□□□□□ -0.34
CDCA3-208ENST00000540683 IREB2P48200 963 aaKnown RBP12.9□□□□□ -0.34
CDCA3-208ENST00000540683 LRRC24Q50LG9 513 aa12.9□□□□□ -0.34
CDCA3-208ENST00000540683 TEKT1Q969V4 418 aa12.9□□□□□ -0.34
CDCA3-208ENST00000540683 PUS3Q9BZE2 481 aaKnown RBP12.9□□□□□ -0.34
CDCA3-208ENST00000540683 ARAP2Q8WZ64 1704 aa12.9□□□□□ -0.34
CDCA3-208ENST00000540683 FAM155AB1AL88 458 aaPredicted RBP12.89□□□□□ -0.35
CDCA3-208ENST00000540683 ALDH1A1P00352 501 aa12.89□□□□□ -0.35
CDCA3-208ENST00000540683 KIF23Q02241 960 aaPredicted RBP12.89□□□□□ -0.35
CDCA3-208ENST00000540683 PTPN12Q05209 780 aaKnown RBP12.89□□□□□ -0.35
CDCA3-208ENST00000540683 ZKSCAN2Q63HK3 967 aa12.89□□□□□ -0.35
CDCA3-208ENST00000540683 SLF2Q8IX21 1173 aa12.89□□□□□ -0.35
CDCA3-208ENST00000540683 FTSJ3Q8IY81 847 aaKnown RBP12.89□□□□□ -0.35
CDCA3-208ENST00000540683 CERS5Q8N5B7 392 aa12.89□□□□□ -0.35
CDCA3-208ENST00000540683 VGLL2Q8N8G2 317 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms