RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 CWC25Q9NXE8 425 aaPredicted RBP14.34□□□□□ -0.11
NPC1-202ENST00000540608 CGNQ9P2M7 1197 aaKnown RBP14.34□□□□□ -0.11
NPC1-202ENST00000540608 EYA2O00167 538 aa14.34□□□□□ -0.11
NPC1-202ENST00000540608 CCZ1BP86790 482 aa14.34□□□□□ -0.11
NPC1-202ENST00000540608 CCZ1P86791 482 aaPredicted RBP14.34□□□□□ -0.11
NPC1-202ENST00000540608 PTPN14Q15678 1187 aa14.34□□□□□ -0.11
NPC1-202ENST00000540608 A0A087WWV3 80 aa14.34□□□□□ -0.11
NPC1-202ENST00000540608 USP27XA6NNY8 438 aa14.34□□□□□ -0.11
NPC1-202ENST00000540608 FILIP1Q7Z7B0 1213 aa14.34□□□□□ -0.11
NPC1-202ENST00000540608 AOPEPQ8N6M6 819 aa14.34□□□□□ -0.11
NPC1-202ENST00000540608 SDF4Q9BRK5 362 aa14.34□□□□□ -0.11
NPC1-202ENST00000540608 OGFRQ9NZT2 677 aa14.34□□□□□ -0.11
NPC1-202ENST00000540608 PARP4Q9UKK3 1724 aaKnown RBP14.33□□□□□ -0.12
NPC1-202ENST00000540608 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.33□□□□□ -0.12
NPC1-202ENST00000540608 M0R2C6 588 aa14.33□□□□□ -0.12
NPC1-202ENST00000540608 CIAO1O76071 339 aa14.33□□□□□ -0.12
NPC1-202ENST00000540608 A1BGP04217 495 aa14.33□□□□□ -0.12
NPC1-202ENST00000540608 GSDMDP57764 484 aa14.33□□□□□ -0.12
NPC1-202ENST00000540608 LINC00301Q8NCQ3 95 aa14.33□□□□□ -0.12
NPC1-202ENST00000540608 ZNF592Q92610 1267 aa14.33□□□□□ -0.12
NPC1-202ENST00000540608 ATG3Q9NT62 314 aa14.33□□□□□ -0.12
NPC1-202ENST00000540608 CTNNA3Q9UI47 895 aa14.33□□□□□ -0.12
NPC1-202ENST00000540608 PPFIA3O75145 1194 aa14.33□□□□□ -0.12
NPC1-202ENST00000540608 LRRC24Q50LG9 513 aa14.33□□□□□ -0.12
NPC1-202ENST00000540608 TTLL5Q6EMB2 1281 aa14.33□□□□□ -0.12
NPC1-202ENST00000540608 BPIFA3Q9BQP9 254 aa14.33□□□□□ -0.12
NPC1-202ENST00000540608 IMPACTQ9P2X3 320 aa14.33□□□□□ -0.12
NPC1-202ENST00000540608 SPEF2Q9C093 1822 aa14.32□□□□□ -0.12
NPC1-202ENST00000540608 A0A1B0GUL7 405 aa14.32□□□□□ -0.12
NPC1-202ENST00000540608 A0A1B0GVL5 298 aa14.32□□□□□ -0.12
NPC1-202ENST00000540608 NDUFA8P51970 172 aa14.32□□□□□ -0.12
NPC1-202ENST00000540608 CCAR2Q8N163 923 aaKnown RBP14.32□□□□□ -0.12
NPC1-202ENST00000540608 OSBPL5Q9H0X9 879 aaPredicted RBP14.32□□□□□ -0.12
NPC1-202ENST00000540608 KIAA1468Q9P260 1216 aa14.32□□□□□ -0.12
NPC1-202ENST00000540608 LRRFIP1Q32MZ4 808 aaKnown RBP14.32□□□□□ -0.12
NPC1-202ENST00000540608 ZCRB1Q8TBF4 217 aaKnown RBP14.32□□□□□ -0.12
NPC1-202ENST00000540608 KCNG4Q8TDN1 519 aa14.32□□□□□ -0.12
NPC1-202ENST00000540608 ERCC4Q92889 916 aaPredicted RBP14.32□□□□□ -0.12
NPC1-202ENST00000540608 OSBP2Q969R2 916 aa14.32□□□□□ -0.12
NPC1-202ENST00000540608 XIRP1Q702N8 1843 aaKnown RBP14.32□□□□□ -0.12
NPC1-202ENST00000540608 DHX16O60231 1041 aaKnown RBP14.31□□□□□ -0.12
NPC1-202ENST00000540608 YEATS4O95619 227 aa14.31□□□□□ -0.12
NPC1-202ENST00000540608 NAA30Q147X3 362 aaPredicted RBP14.31□□□□□ -0.12
NPC1-202ENST00000540608 SF3A1Q15459 793 aaKnown RBP14.31□□□□□ -0.12
NPC1-202ENST00000540608 NBPF11Q86T75 865 aa14.31□□□□□ -0.12
NPC1-202ENST00000540608 ZNF594Q96JF6 807 aaPredicted RBP14.31□□□□□ -0.12
NPC1-202ENST00000540608 ZBTB3Q9H5J0 574 aa14.31□□□□□ -0.12
NPC1-202ENST00000540608 POLR3EQ9NVU0 708 aa14.31□□□□□ -0.12
NPC1-202ENST00000540608 CLIC4Q9Y696 253 aa14.31□□□□□ -0.12
NPC1-202ENST00000540608 STK38Q15208 465 aa14.31□□□□□ -0.12
NPC1-202ENST00000540608 CCDC191Q8NCU4 936 aa14.31□□□□□ -0.12
NPC1-202ENST00000540608 C8orf76Q96K31 380 aa14.31□□□□□ -0.12
NPC1-202ENST00000540608 TJP1Q07157 1748 aa14.31□□□□□ -0.12
NPC1-202ENST00000540608 NUP188Q5SRE5 1749 aa14.31□□□□□ -0.12
NPC1-202ENST00000540608 PCDH11XQ9BZA7 1347 aa14.31□□□□□ -0.12
NPC1-202ENST00000540608 PCDH11YQ9BZA8 1340 aa14.31□□□□□ -0.12
NPC1-202ENST00000540608 IMMTQ16891 758 aaKnown RBP14.3□□□□□ -0.12
NPC1-202ENST00000540608 TOM1L2Q6ZVM7 507 aa14.3□□□□□ -0.12
NPC1-202ENST00000540608 FBXO18Q8NFZ0 1043 aa14.3□□□□□ -0.12
NPC1-202ENST00000540608 GPHNQ9NQX3 736 aaPredicted RBP14.3□□□□□ -0.12
NPC1-202ENST00000540608 WDR17Q8IZU2 1322 aa14.3□□□□□ -0.12
NPC1-202ENST00000540608 KIF2AO00139 706 aaPredicted RBP14.3□□□□□ -0.12
NPC1-202ENST00000540608 BRAPQ7Z569 592 aa14.3□□□□□ -0.12
NPC1-202ENST00000540608 KCPQ6ZWJ8 1503 aa14.3□□□□□ -0.12
NPC1-202ENST00000540608 UBR2Q8IWV8 1755 aa14.3□□□□□ -0.12
NPC1-202ENST00000540608 SPTLC2O15270 562 aa14.29□□□□□ -0.12
NPC1-202ENST00000540608 ZFYP08048 801 aaPredicted RBP14.29□□□□□ -0.12
NPC1-202ENST00000540608 FKBP4Q02790 459 aaKnown RBP eCLIP14.29□□□□□ -0.12
NPC1-202ENST00000540608 ZRSR1Q15695 479 aaKnown RBP14.29□□□□□ -0.12
NPC1-202ENST00000540608 OTUD7BQ6GQQ9 843 aa14.29□□□□□ -0.12
NPC1-202ENST00000540608 PRDM11Q9NQV5 511 aa14.29□□□□□ -0.12
NPC1-202ENST00000540608 TRMT1Q9NXH9 659 aaKnown RBP14.29□□□□□ -0.12
NPC1-202ENST00000540608 CEP126Q9P2H0 1117 aa14.29□□□□□ -0.12
NPC1-202ENST00000540608 DDX41Q9UJV9 622 aaKnown RBP14.29□□□□□ -0.12
NPC1-202ENST00000540608 FOXP2O15409 715 aa14.29□□□□□ -0.12
NPC1-202ENST00000540608 POLR3DP05423 398 aaPredicted RBP14.29□□□□□ -0.12
NPC1-202ENST00000540608 DPCR1Q3MIW9 517 aa14.29□□□□□ -0.12
NPC1-202ENST00000540608 CCDC158Q5M9N0 1113 aa14.29□□□□□ -0.12
NPC1-202ENST00000540608 KIF18AQ8NI77 898 aa14.29□□□□□ -0.12
NPC1-202ENST00000540608 FBXW7Q969H0 707 aa14.29□□□□□ -0.12
NPC1-202ENST00000540608 HPS5Q9UPZ3 1129 aa14.29□□□□□ -0.12
NPC1-202ENST00000540608 NEDD4P46934 1319 aa14.28□□□□□ -0.12
NPC1-202ENST00000540608 ERVV-2B6SEH9 535 aa14.28□□□□□ -0.12
NPC1-202ENST00000540608 PRC1O43663 620 aa14.28□□□□□ -0.12
NPC1-202ENST00000540608 FGAP02671 866 aa14.28□□□□□ -0.12
NPC1-202ENST00000540608 MYSM1Q5VVJ2 828 aa14.28□□□□□ -0.12
NPC1-202ENST00000540608 BRINP3Q76B58 766 aa14.28□□□□□ -0.12
NPC1-202ENST00000540608 MB21D2Q8IYB1 491 aaPredicted RBP14.28□□□□□ -0.12
NPC1-202ENST00000540608 RGS22Q8NE09 1264 aa14.28□□□□□ -0.12
NPC1-202ENST00000540608 PUS3Q9BZE2 481 aaKnown RBP14.28□□□□□ -0.12
NPC1-202ENST00000540608 ORC3Q9UBD5 711 aaPredicted RBP14.28□□□□□ -0.12
NPC1-202ENST00000540608 ZNF215Q9UL58 517 aaPredicted RBP14.28□□□□□ -0.12
NPC1-202ENST00000540608 KLF18A0A0U1RQI7 1052 aa14.28□□□□□ -0.12
NPC1-202ENST00000540608 SLC3A2P08195 630 aaKnown RBP14.28□□□□□ -0.12
NPC1-202ENST00000540608 NLRP12P59046 1061 aa14.28□□□□□ -0.12
NPC1-202ENST00000540608 DHX8Q14562 1220 aaKnown RBP14.28□□□□□ -0.12
NPC1-202ENST00000540608 ZHX1Q9UKY1 873 aaPredicted RBP14.28□□□□□ -0.12
NPC1-202ENST00000540608 MORC2Q9Y6X9 1032 aaPredicted RBP14.28□□□□□ -0.12
NPC1-202ENST00000540608 ZNF202O95125 648 aa14.28□□□□□ -0.12
NPC1-202ENST00000540608 WASHC4Q2M389 1173 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms