RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 CLEC17AQ6ZS10 378 aa11.49□□□□□ -0.57
PHC1-208ENST00000540574 CPLX3Q8WVH0 158 aa11.49□□□□□ -0.57
PHC1-208ENST00000540574 MRPS27Q92552 414 aaKnown RBP11.49□□□□□ -0.57
PHC1-208ENST00000540574 SPTLC2O15270 562 aa11.48□□□□□ -0.57
PHC1-208ENST00000540574 SLC5A1P13866 664 aa11.48□□□□□ -0.57
PHC1-208ENST00000540574 PHKA1P46020 1223 aa11.48□□□□□ -0.57
PHC1-208ENST00000540574 STOX1Q6ZVD7 989 aa11.48□□□□□ -0.57
PHC1-208ENST00000540574 STX1AQ16623 288 aa11.48□□□□□ -0.57
PHC1-208ENST00000540574 ZNF532Q9HCE3 1301 aa11.48□□□□□ -0.57
PHC1-208ENST00000540574 CYP7A1P22680 504 aa11.48□□□□□ -0.57
PHC1-208ENST00000540574 MFSD6Q6ZSS7 791 aa11.48□□□□□ -0.57
PHC1-208ENST00000540574 CNNM3Q8NE01 707 aa11.48□□□□□ -0.57
PHC1-208ENST00000540574 HELLSQ9NRZ9 838 aa11.48□□□□□ -0.57
PHC1-208ENST00000540574 FAM182BQ5T319 152 aa11.47□□□□□ -0.57
PHC1-208ENST00000540574 SKILP12757 684 aa11.47□□□□□ -0.57
PHC1-208ENST00000540574 PDIA3P30101 505 aaKnown RBP11.47□□□□□ -0.57
PHC1-208ENST00000540574 DHX8Q14562 1220 aaKnown RBP11.47□□□□□ -0.57
PHC1-208ENST00000540574 JMYQ8N9B5 988 aa11.47□□□□□ -0.57
PHC1-208ENST00000540574 PIGBQ92521 554 aa11.47□□□□□ -0.57
PHC1-208ENST00000540574 ADGRL3Q9HAR2 1447 aa11.47□□□□□ -0.57
PHC1-208ENST00000540574 SEC31BQ9NQW1 1179 aa11.47□□□□□ -0.57
PHC1-208ENST00000540574 KCNJ14Q9UNX9 436 aa11.47□□□□□ -0.57
PHC1-208ENST00000540574 ZNF335Q9H4Z2 1342 aaPredicted RBP11.46□□□□□ -0.57
PHC1-208ENST00000540574 TPM3P06753 285 aa11.46□□□□□ -0.57
PHC1-208ENST00000540574 SYKP43405 635 aa11.46□□□□□ -0.57
PHC1-208ENST00000540574 PTPN14Q15678 1187 aa11.46□□□□□ -0.57
PHC1-208ENST00000540574 NSUN7Q8NE18 718 aaKnown RBP11.46□□□□□ -0.57
PHC1-208ENST00000540574 APPBP2Q92624 585 aa11.46□□□□□ -0.57
PHC1-208ENST00000540574 MRVI1Q9Y6F6 885 aa11.46□□□□□ -0.57
PHC1-208ENST00000540574 CDKL5O76039 1030 aa11.46□□□□□ -0.57
PHC1-208ENST00000540574 AFMP43652 599 aa11.46□□□□□ -0.57
PHC1-208ENST00000540574 SSRP1Q08945 709 aaKnown RBP11.46□□□□□ -0.57
PHC1-208ENST00000540574 HS1BP3Q53T59 392 aa11.46□□□□□ -0.57
PHC1-208ENST00000540574 BRINP3Q76B58 766 aa11.46□□□□□ -0.57
PHC1-208ENST00000540574 PGBD1Q96JS3 809 aa11.46□□□□□ -0.57
PHC1-208ENST00000540574 CLSTN2Q9H4D0 955 aa11.46□□□□□ -0.57
PHC1-208ENST00000540574 CLIC4Q9Y696 253 aa11.46□□□□□ -0.57
PHC1-208ENST00000540574 ARID5BQ14865 1188 aa11.46□□□□□ -0.58
PHC1-208ENST00000540574 PDCL2Q8N4E4 241 aa11.46□□□□□ -0.58
PHC1-208ENST00000540574 IFNKQ9P0W0 207 aa11.46□□□□□ -0.58
PHC1-208ENST00000540574 DENND2AQ9ULE3 1009 aa11.46□□□□□ -0.58
PHC1-208ENST00000540574 G3V3G9 751 aa11.45□□□□□ -0.58
PHC1-208ENST00000540574 SFPQP23246 707 aaKnown RBP eCLIP11.45□□□□□ -0.58
PHC1-208ENST00000540574 BCAMP50895 628 aa11.45□□□□□ -0.58
PHC1-208ENST00000540574 DDB1Q16531 1140 aa11.45□□□□□ -0.58
PHC1-208ENST00000540574 DCAF8Q5TAQ9 597 aa11.45□□□□□ -0.58
PHC1-208ENST00000540574 CCDC34Q96HJ3 373 aa11.45□□□□□ -0.58
PHC1-208ENST00000540574 ZFYP08048 801 aaPredicted RBP11.45□□□□□ -0.58
PHC1-208ENST00000540574 ATP2B2Q01814 1243 aa11.45□□□□□ -0.58
PHC1-208ENST00000540574 PPP4R3BQ5MIZ7 849 aa11.45□□□□□ -0.58
PHC1-208ENST00000540574 SDR42E1Q8WUS8 393 aa11.45□□□□□ -0.58
PHC1-208ENST00000540574 RGPD8O14715 1765 aaPredicted RBP11.45□□□□□ -0.58
PHC1-208ENST00000540574 HEG1Q9ULI3 1381 aa11.45□□□□□ -0.58
PHC1-208ENST00000540574 ANKRD26Q9UPS8 1709 aa11.45□□□□□ -0.58
PHC1-208ENST00000540574 MARCH6O60337 910 aa11.45□□□□□ -0.58
PHC1-208ENST00000540574 C11orf57Q6ZUT1 292 aaPredicted RBP11.45□□□□□ -0.58
PHC1-208ENST00000540574 PCMTD1Q96MG8 357 aaPredicted RBP11.45□□□□□ -0.58
PHC1-208ENST00000540574 TEX13AQ9BXU3 409 aaPredicted RBP11.45□□□□□ -0.58
PHC1-208ENST00000540574 WWC3Q9ULE0 1092 aa11.45□□□□□ -0.58
PHC1-208ENST00000540574 PRKAB2O43741 272 aa11.44□□□□□ -0.58
PHC1-208ENST00000540574 ST3GAL1Q11201 340 aa11.44□□□□□ -0.58
PHC1-208ENST00000540574 WTAPQ15007 396 aa11.44□□□□□ -0.58
PHC1-208ENST00000540574 ZMYM1Q5SVZ6 1142 aa11.44□□□□□ -0.58
PHC1-208ENST00000540574 STAMQ92783 540 aa11.44□□□□□ -0.58
PHC1-208ENST00000540574 CLIC6Q96NY7 704 aa11.44□□□□□ -0.58
PHC1-208ENST00000540574 GNL3LQ9NVN8 582 aaKnown RBP11.44□□□□□ -0.58
PHC1-208ENST00000540574 H7C1W4 665 aa11.44□□□□□ -0.58
PHC1-208ENST00000540574 STX17P56962 302 aa11.44□□□□□ -0.58
PHC1-208ENST00000540574 FOXO4P98177 505 aa11.44□□□□□ -0.58
PHC1-208ENST00000540574 CCDC102BQ68D86 513 aa11.44□□□□□ -0.58
PHC1-208ENST00000540574 MNS1Q8NEH6 495 aa11.44□□□□□ -0.58
PHC1-208ENST00000540574 PDCL3Q9H2J4 239 aa11.44□□□□□ -0.58
PHC1-208ENST00000540574 KNDC1Q76NI1 1749 aa11.44□□□□□ -0.58
PHC1-208ENST00000540574 RIOK3O14730 519 aaKnown RBP11.44□□□□□ -0.58
PHC1-208ENST00000540574 XBP1P17861 261 aa11.44□□□□□ -0.58
PHC1-208ENST00000540574 ATG9AQ7Z3C6 839 aa11.44□□□□□ -0.58
PHC1-208ENST00000540574 PCDHA7Q9UN72 937 aa11.44□□□□□ -0.58
PHC1-208ENST00000540574 WDR17Q8IZU2 1322 aa11.44□□□□□ -0.58
PHC1-208ENST00000540574 PFKFB2O60825 505 aa11.43□□□□□ -0.58
PHC1-208ENST00000540574 NDUFA8P51970 172 aa11.43□□□□□ -0.58
PHC1-208ENST00000540574 FAM160A1Q05DH4 1040 aa11.43□□□□□ -0.58
PHC1-208ENST00000540574 HOOK1Q9UJC3 728 aaKnown RBP11.43□□□□□ -0.58
PHC1-208ENST00000540574 PEAK1Q9H792 1746 aa11.43□□□□□ -0.58
PHC1-208ENST00000540574 VIRMAQ69YN4 1812 aaKnown RBP11.43□□□□□ -0.58
PHC1-208ENST00000540574 ZNF609O15014 1411 aa11.43□□□□□ -0.58
PHC1-208ENST00000540574 ERVV-2B6SEH9 535 aa11.43□□□□□ -0.58
PHC1-208ENST00000540574 EPB41L2O43491 1005 aaKnown RBP11.43□□□□□ -0.58
PHC1-208ENST00000540574 PDIA4P13667 645 aaKnown RBP11.43□□□□□ -0.58
PHC1-208ENST00000540574 TTF1Q15361 905 aaPredicted RBP11.43□□□□□ -0.58
PHC1-208ENST00000540574 ZNF771Q7L3S4 317 aaPredicted RBP11.43□□□□□ -0.58
PHC1-208ENST00000540574 PDLIM2Q96JY6 352 aa11.43□□□□□ -0.58
PHC1-208ENST00000540574 DSCC1Q9BVC3 393 aa11.43□□□□□ -0.58
PHC1-208ENST00000540574 ZSWIM4Q9H7M6 989 aa11.43□□□□□ -0.58
PHC1-208ENST00000540574 TFCP2L1Q9NZI6 479 aa11.43□□□□□ -0.58
PHC1-208ENST00000540574 ANGEL1Q9UNK9 670 aaKnown RBP11.43□□□□□ -0.58
PHC1-208ENST00000540574 TCHHQ07283 1943 aa11.43□□□□□ -0.58
PHC1-208ENST00000540574 GYG1P46976 350 aa11.43□□□□□ -0.58
PHC1-208ENST00000540574 ZNF75DP51815 510 aa11.43□□□□□ -0.58
PHC1-208ENST00000540574 CAVIN4Q5BKX8 364 aa11.43□□□□□ -0.58
PHC1-208ENST00000540574 ANKIB1Q9P2G1 1089 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms