RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 PTPN22Q9Y2R2 807 aa14.4□□□□□ -0.1
TMEM258-205ENST00000540434 RLBP1P12271 317 aa14.39□□□□□ -0.11
TMEM258-205ENST00000540434 ITGA6P23229 1130 aa14.39□□□□□ -0.11
TMEM258-205ENST00000540434 ZNF280AP59817 542 aaPredicted RBP14.39□□□□□ -0.11
TMEM258-205ENST00000540434 CD99L2Q8TCZ2 262 aa14.39□□□□□ -0.11
TMEM258-205ENST00000540434 CLUAP1Q96AJ1 413 aa14.39□□□□□ -0.11
TMEM258-205ENST00000540434 YTHDC1Q96MU7 727 aaKnown RBP14.39□□□□□ -0.11
TMEM258-205ENST00000540434 C6orf229H3BNL8 230 aa14.38□□□□□ -0.11
TMEM258-205ENST00000540434 MYCP01106 439 aaPredicted RBP14.38□□□□□ -0.11
TMEM258-205ENST00000540434 PRKG1Q13976 671 aa14.38□□□□□ -0.11
TMEM258-205ENST00000540434 ARHGAP45Q92619 1136 aa14.38□□□□□ -0.11
TMEM258-205ENST00000540434 CFHR5Q9BXR6 569 aa14.38□□□□□ -0.11
TMEM258-205ENST00000540434 BICC1Q9H694 974 aaKnown RBP14.38□□□□□ -0.11
TMEM258-205ENST00000540434 ZNF609O15014 1411 aa14.38□□□□□ -0.11
TMEM258-205ENST00000540434 SNAP23O00161 211 aa14.37□□□□□ -0.11
TMEM258-205ENST00000540434 SREBF2Q12772 1141 aa14.37□□□□□ -0.11
TMEM258-205ENST00000540434 ATF7IPQ6VMQ6 1270 aa14.37□□□□□ -0.11
TMEM258-205ENST00000540434 TBC1D16Q8TBP0 767 aa14.37□□□□□ -0.11
TMEM258-205ENST00000540434 ARMC5Q96C12 935 aa14.37□□□□□ -0.11
TMEM258-205ENST00000540434 GMLQ99445 158 aa14.37□□□□□ -0.11
TMEM258-205ENST00000540434 MEIS3Q99687 375 aa14.37□□□□□ -0.11
TMEM258-205ENST00000540434 API5Q9BZZ5 524 aaKnown RBP14.37□□□□□ -0.11
TMEM258-205ENST00000540434 MINPP1Q9UNW1 487 aa14.37□□□□□ -0.11
TMEM258-205ENST00000540434 FZD1Q9UP38 647 aa14.37□□□□□ -0.11
TMEM258-205ENST00000540434 PTPN12Q05209 780 aaKnown RBP14.36□□□□□ -0.11
TMEM258-205ENST00000540434 ANKRD18AQ8IVF6 992 aa14.36□□□□□ -0.11
TMEM258-205ENST00000540434 TMEM57Q8N5G2 664 aa14.36□□□□□ -0.11
TMEM258-205ENST00000540434 KLHDC4Q8TBB5 520 aa14.36□□□□□ -0.11
TMEM258-205ENST00000540434 PUS3Q9BZE2 481 aaKnown RBP14.36□□□□□ -0.11
TMEM258-205ENST00000540434 PITPNM2Q9BZ72 1349 aa14.36□□□□□ -0.11
TMEM258-205ENST00000540434 PLIN1O60240 522 aa14.35□□□□□ -0.11
TMEM258-205ENST00000540434 HSP90B1P14625 803 aaKnown RBP14.35□□□□□ -0.11
TMEM258-205ENST00000540434 CCT4P50991 539 aaKnown RBP14.35□□□□□ -0.11
TMEM258-205ENST00000540434 RABL6Q3YEC7 729 aaPredicted RBP14.35□□□□□ -0.11
TMEM258-205ENST00000540434 AGBL3Q8NEM8 1001 aa14.35□□□□□ -0.11
TMEM258-205ENST00000540434 EYA3Q99504 573 aa14.35□□□□□ -0.11
TMEM258-205ENST00000540434 TMEM106CQ9BVX2 250 aa14.35□□□□□ -0.11
TMEM258-205ENST00000540434 BSDC1Q9NW68 430 aaPredicted RBP14.35□□□□□ -0.11
TMEM258-205ENST00000540434 CHMP3Q9Y3E7 222 aa14.35□□□□□ -0.11
TMEM258-205ENST00000540434 KIF16BQ96L93 1317 aa14.35□□□□□ -0.11
TMEM258-205ENST00000540434 ZNF646O15015 1829 aaPredicted RBP14.34□□□□□ -0.11
TMEM258-205ENST00000540434 SOX1O00570 391 aaPredicted RBP14.34□□□□□ -0.11
TMEM258-205ENST00000540434 KLRK1P26718 216 aa14.34□□□□□ -0.11
TMEM258-205ENST00000540434 RSBN1LQ6PCB5 846 aaPredicted RBP14.34□□□□□ -0.11
TMEM258-205ENST00000540434 TXNRD3Q86VQ6 643 aa14.34□□□□□ -0.11
TMEM258-205ENST00000540434 HELBQ8NG08 1087 aaPredicted RBP14.34□□□□□ -0.11
TMEM258-205ENST00000540434 PODXL2Q9NZ53 605 aa14.34□□□□□ -0.11
TMEM258-205ENST00000540434 A0A1B0GUL6 1792 aa14.33□□□□□ -0.12
TMEM258-205ENST00000540434 LAMB1P07942 1786 aa14.33□□□□□ -0.12
TMEM258-205ENST00000540434 ANKRD18BA2A2Z9 1011 aa14.33□□□□□ -0.12
TMEM258-205ENST00000540434 IGF2BP3O00425 579 aaKnown RBP eCLIP14.33□□□□□ -0.12
TMEM258-205ENST00000540434 TAF5LO75529 589 aa14.33□□□□□ -0.12
TMEM258-205ENST00000540434 RFX5P48382 616 aaPredicted RBP14.33□□□□□ -0.12
TMEM258-205ENST00000540434 SPRYD7Q5W111 196 aa14.33□□□□□ -0.12
TMEM258-205ENST00000540434 ZKSCAN2Q63HK3 967 aa14.33□□□□□ -0.12
TMEM258-205ENST00000540434 PANK1Q8TE04 598 aa14.33□□□□□ -0.12
TMEM258-205ENST00000540434 ZNF333Q96JL9 665 aa14.33□□□□□ -0.12
TMEM258-205ENST00000540434 CDC5LQ99459 802 aaKnown RBP14.33□□□□□ -0.12
TMEM258-205ENST00000540434 ZC3H12CQ9C0D7 883 aaKnown RBP14.33□□□□□ -0.12
TMEM258-205ENST00000540434 MYOZ2Q9NPC6 264 aa14.33□□□□□ -0.12
TMEM258-205ENST00000540434 UFL1O94874 794 aa14.32□□□□□ -0.12
TMEM258-205ENST00000540434 CHRNDQ07001 517 aa14.32□□□□□ -0.12
TMEM258-205ENST00000540434 IFIT5Q13325 482 aaKnown RBP14.32□□□□□ -0.12
TMEM258-205ENST00000540434 SLC4A8Q2Y0W8 1093 aa14.32□□□□□ -0.12
TMEM258-205ENST00000540434 NBPF9Q3BBW0 867 aa14.32□□□□□ -0.12
TMEM258-205ENST00000540434 IFNL1Q8IU54 200 aa14.32□□□□□ -0.12
TMEM258-205ENST00000540434 LRCH3Q96II8 777 aa14.32□□□□□ -0.12
TMEM258-205ENST00000540434 EFCC1Q9HA90 598 aa14.32□□□□□ -0.12
TMEM258-205ENST00000540434 ANKIB1Q9P2G1 1089 aa14.32□□□□□ -0.12
TMEM258-205ENST00000540434 LRRFIP2Q9Y608 721 aaKnown RBP14.32□□□□□ -0.12
TMEM258-205ENST00000540434 IPO8O15397 1037 aaKnown RBP14.31□□□□□ -0.12
TMEM258-205ENST00000540434 USP17L8P0C7I0 530 aa14.31□□□□□ -0.12
TMEM258-205ENST00000540434 MNX1P50219 401 aaPredicted RBP14.31□□□□□ -0.12
TMEM258-205ENST00000540434 LRRC24Q50LG9 513 aa14.31□□□□□ -0.12
TMEM258-205ENST00000540434 C20orf194Q5TEA3 1177 aa14.31□□□□□ -0.12
TMEM258-205ENST00000540434 RCAN3Q9UKA8 241 aa14.31□□□□□ -0.12
TMEM258-205ENST00000540434 IRS2Q9Y4H2 1338 aa14.31□□□□□ -0.12
TMEM258-205ENST00000540434 IGHMBP2P38935 993 aaKnown RBP14.3□□□□□ -0.12
TMEM258-205ENST00000540434 DPF3Q92784 378 aa14.3□□□□□ -0.12
TMEM258-205ENST00000540434 ERO1AQ96HE7 468 aa14.3□□□□□ -0.12
TMEM258-205ENST00000540434 GGA1Q9UJY5 639 aa14.3□□□□□ -0.12
TMEM258-205ENST00000540434 RIPOR2Q9Y4F9 1068 aa14.3□□□□□ -0.12
TMEM258-205ENST00000540434 PTCH2Q9Y6C5 1203 aa14.3□□□□□ -0.12
TMEM258-205ENST00000540434 XDHP47989 1333 aa14.3□□□□□ -0.12
TMEM258-205ENST00000540434 ALDH1A1P00352 501 aa14.29□□□□□ -0.12
TMEM258-205ENST00000540434 UBTFL1P0CB47 393 aaPredicted RBP14.29□□□□□ -0.12
TMEM258-205ENST00000540434 CRHR2Q13324 411 aa14.29□□□□□ -0.12
TMEM258-205ENST00000540434 CCDC57Q2TAC2 916 aa14.29□□□□□ -0.12
TMEM258-205ENST00000540434 LDLRAD1Q5T700 205 aa14.29□□□□□ -0.12
TMEM258-205ENST00000540434 LDHAL6AQ6ZMR3 332 aa14.29□□□□□ -0.12
TMEM258-205ENST00000540434 DZIP1LQ8IYY4 767 aaKnown RBP14.29□□□□□ -0.12
TMEM258-205ENST00000540434 MPHOSPH8Q99549 860 aa14.29□□□□□ -0.12
TMEM258-205ENST00000540434 MXD3Q9BW11 206 aa14.29□□□□□ -0.12
TMEM258-205ENST00000540434 PRO3102Q9H379 93 aa14.29□□□□□ -0.12
TMEM258-205ENST00000540434 LAMA3Q16787 3333 aa14.29□□□□□ -0.12
TMEM258-205ENST00000540434 ZBTB7BO15156 539 aaPredicted RBP14.28□□□□□ -0.12
TMEM258-205ENST00000540434 ATP2B4P23634 1241 aa14.28□□□□□ -0.12
TMEM258-205ENST00000540434 CLMNQ96JQ2 1002 aa14.28□□□□□ -0.12
TMEM258-205ENST00000540434 COL25A1Q9BXS0 654 aaPredicted RBP14.28□□□□□ -0.12
TMEM258-205ENST00000540434 C1orf115Q9H7X2 142 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms