RNA–Protein interactions for RNA: ENST00000540418.5

MDM1-210, Transcript of Mdm1 nuclear protein, humanhuman

TSL 1 (best)

Gene MDM1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-210ENST00000540418 IGHDP01880 384 aa18.33■□□□□ 0.52
MDM1-210ENST00000540418 LMOD1P29536 600 aaPredicted RBP18.33■□□□□ 0.52
MDM1-210ENST00000540418 FKBP1AP62942 108 aaKnown RBP18.33■□□□□ 0.52
MDM1-210ENST00000540418 GMLQ99445 158 aa18.33■□□□□ 0.52
MDM1-210ENST00000540418 GPRC5DQ9NZD1 345 aa18.33■□□□□ 0.52
MDM1-210ENST00000540418 HACL1Q9UJ83 578 aa18.33■□□□□ 0.52
MDM1-210ENST00000540418 DBNLQ9UJU6 430 aaKnown RBP18.33■□□□□ 0.52
MDM1-210ENST00000540418 MYO3BQ8WXR4 1341 aa18.33■□□□□ 0.52
MDM1-210ENST00000540418 CCDC158Q5M9N0 1113 aa18.32■□□□□ 0.52
MDM1-210ENST00000540418 MXD3Q9BW11 206 aa18.32■□□□□ 0.52
MDM1-210ENST00000540418 WDR90Q96KV7 1748 aa18.32■□□□□ 0.52
MDM1-210ENST00000540418 NEFLP07196 543 aa18.32■□□□□ 0.52
MDM1-210ENST00000540418 CNOT7Q9UIV1 285 aaKnown RBP18.32■□□□□ 0.52
MDM1-210ENST00000540418 DENND2AQ9ULE3 1009 aa18.32■□□□□ 0.52
MDM1-210ENST00000540418 JAG2Q9Y219 1238 aa18.32■□□□□ 0.52
MDM1-210ENST00000540418 SMARCA5O60264 1052 aaPredicted RBP18.31■□□□□ 0.52
MDM1-210ENST00000540418 IFIT2P09913 472 aaKnown RBP18.31■□□□□ 0.52
MDM1-210ENST00000540418 CHAF1AQ13111 956 aaPredicted RBP18.31■□□□□ 0.52
MDM1-210ENST00000540418 TLR7Q9NYK1 1049 aaKnown RBP18.31■□□□□ 0.52
MDM1-210ENST00000540418 ARAP2Q8WZ64 1704 aa18.31■□□□□ 0.52
MDM1-210ENST00000540418 UQCRFS1P1P0C7P4 283 aa18.31■□□□□ 0.52
MDM1-210ENST00000540418 EPS15P42566 896 aa18.31■□□□□ 0.52
MDM1-210ENST00000540418 BCL11AQ9H165 835 aa18.31■□□□□ 0.52
MDM1-210ENST00000540418 ARID4AP29374 1257 aaPredicted RBP18.3■□□□□ 0.52
MDM1-210ENST00000540418 TTC39AQ5SRH9 613 aa18.3■□□□□ 0.52
MDM1-210ENST00000540418 TBC1D22AQ8WUA7 517 aa18.3■□□□□ 0.52
MDM1-210ENST00000540418 H7C1D1 291 aa18.3■□□□□ 0.52
MDM1-210ENST00000540418 MFSD14BQ5SR56 506 aa18.3■□□□□ 0.52
MDM1-210ENST00000540418 CERS5Q8N5B7 392 aa18.3■□□□□ 0.52
MDM1-210ENST00000540418 WDR66Q8TBY9 1149 aa18.3■□□□□ 0.52
MDM1-210ENST00000540418 ZNF512BQ96KM6 892 aaPredicted RBP18.3■□□□□ 0.52
MDM1-210ENST00000540418 TAF1DQ9H5J8 278 aaPredicted RBP18.3■□□□□ 0.52
MDM1-210ENST00000540418 EPHX2P34913 555 aa18.29■□□□□ 0.52
MDM1-210ENST00000540418 RASGRF1Q13972 1273 aa18.29■□□□□ 0.52
MDM1-210ENST00000540418 SMC5Q8IY18 1101 aa18.29■□□□□ 0.52
MDM1-210ENST00000540418 MICALL2Q8IY33 904 aa18.29■□□□□ 0.52
MDM1-210ENST00000540418 USP17L8P0C7I0 530 aa18.29■□□□□ 0.52
MDM1-210ENST00000540418 MMP14P50281 582 aa18.29■□□□□ 0.52
MDM1-210ENST00000540418 KIF3CO14782 793 aa18.28■□□□□ 0.52
MDM1-210ENST00000540418 PDS5AQ29RF7 1337 aaKnown RBP18.28■□□□□ 0.52
MDM1-210ENST00000540418 ANKRD45Q5TZF3 282 aa18.28■□□□□ 0.52
MDM1-210ENST00000540418 ADARB2Q9NS39 739 aaKnown RBP18.28■□□□□ 0.52
MDM1-210ENST00000540418 PSME4Q14997 1843 aa18.28■□□□□ 0.52
MDM1-210ENST00000540418 ZNF280AP59817 542 aaPredicted RBP18.28■□□□□ 0.52
MDM1-210ENST00000540418 OGFOD1Q8N543 542 aa18.28■□□□□ 0.52
MDM1-210ENST00000540418 HMG20BQ9P0W2 317 aa18.28■□□□□ 0.52
MDM1-210ENST00000540418 ZBTB47Q9UFB7 747 aaPredicted RBP18.28■□□□□ 0.52
MDM1-210ENST00000540418 SHTN1A0MZ66 631 aa18.27■□□□□ 0.52
MDM1-210ENST00000540418 PNMA8AQ86V59 439 aaPredicted RBP18.27■□□□□ 0.52
MDM1-210ENST00000540418 KIAA0825Q8IV33 1275 aa18.27■□□□□ 0.52
MDM1-210ENST00000540418 SPATA5Q8NB90 893 aa18.27■□□□□ 0.52
MDM1-210ENST00000540418 SUGT1Q9Y2Z0 365 aa18.27■□□□□ 0.52
MDM1-210ENST00000540418 MCAMP43121 646 aa18.26■□□□□ 0.51
MDM1-210ENST00000540418 SCARF1Q14162 830 aa18.26■□□□□ 0.51
MDM1-210ENST00000540418 USP50Q70EL3 339 aaPredicted RBP18.26■□□□□ 0.51
MDM1-210ENST00000540418 C16orf71Q8IYS4 520 aaPredicted RBP18.26■□□□□ 0.51
MDM1-210ENST00000540418 HDAC9Q9UKV0 1011 aa18.26■□□□□ 0.51
MDM1-210ENST00000540418 SCN4AP35499 1836 aa18.26■□□□□ 0.51
MDM1-210ENST00000540418 COL1A1P02452 1464 aaPredicted RBP18.26■□□□□ 0.51
MDM1-210ENST00000540418 SALL1Q9NSC2 1324 aa18.26■□□□□ 0.51
MDM1-210ENST00000540418 ZNF646O15015 1829 aaPredicted RBP18.25■□□□□ 0.51
MDM1-210ENST00000540418 F8W031 263 aaPredicted RBP18.25■□□□□ 0.51
MDM1-210ENST00000540418 SAMD7Q7Z3H4 446 aa18.25■□□□□ 0.51
MDM1-210ENST00000540418 ZGPATQ8N5A5 531 aaKnown RBP18.25■□□□□ 0.51
MDM1-210ENST00000540418 GRIK5Q16478 980 aa18.24■□□□□ 0.51
MDM1-210ENST00000540418 B4GALNT3Q6L9W6 998 aa18.24■□□□□ 0.51
MDM1-210ENST00000540418 PI16Q6UXB8 463 aa18.24■□□□□ 0.51
MDM1-210ENST00000540418 MYOZ2Q9NPC6 264 aa18.24■□□□□ 0.51
MDM1-210ENST00000540418 TTF2Q9UNY4 1162 aaKnown RBP18.24■□□□□ 0.51
MDM1-210ENST00000540418 EAPPQ56P03 285 aaPredicted RBP18.24■□□□□ 0.51
MDM1-210ENST00000540418 RBM26Q5T8P6 1007 aaKnown RBP18.24■□□□□ 0.51
MDM1-210ENST00000540418 SNRKQ9NRH2 765 aa18.24■□□□□ 0.51
MDM1-210ENST00000540418 TBC1D10BQ4KMP7 808 aaPredicted RBP18.23■□□□□ 0.51
MDM1-210ENST00000540418 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.23■□□□□ 0.51
MDM1-210ENST00000540418 ATP5JP18859 108 aa18.23■□□□□ 0.51
MDM1-210ENST00000540418 NUCB1Q02818 461 aa18.23■□□□□ 0.51
MDM1-210ENST00000540418 SPTY2D1Q68D10 685 aaPredicted RBP18.23■□□□□ 0.51
MDM1-210ENST00000540418 TRPM4Q8TD43 1214 aa18.23■□□□□ 0.51
MDM1-210ENST00000540418 EGFRP00533 1210 aa18.22■□□□□ 0.51
MDM1-210ENST00000540418 LDHBP07195 334 aaKnown RBP18.22■□□□□ 0.51
MDM1-210ENST00000540418 HIRAP54198 1017 aaPredicted RBP18.22■□□□□ 0.51
MDM1-210ENST00000540418 KIF4BQ2VIQ3 1234 aa18.22■□□□□ 0.51
MDM1-210ENST00000540418 GPATCH3Q96I76 525 aa18.22■□□□□ 0.51
MDM1-210ENST00000540418 ECHDC1Q9NTX5 307 aa18.22■□□□□ 0.51
MDM1-210ENST00000540418 ABCF2Q9UG63 623 aa18.22■□□□□ 0.51
MDM1-210ENST00000540418 TOMM70O94826 608 aa18.22■□□□□ 0.51
MDM1-210ENST00000540418 ZAP70P43403 619 aa18.22■□□□□ 0.51
MDM1-210ENST00000540418 CHD1LQ86WJ1 897 aa18.22■□□□□ 0.51
MDM1-210ENST00000540418 LDHDQ86WU2 507 aa18.22■□□□□ 0.51
MDM1-210ENST00000540418 MRIQ9BWK5 157 aa18.22■□□□□ 0.51
MDM1-210ENST00000540418 HDLBPQ00341 1268 aaKnown RBP18.21■□□□□ 0.51
MDM1-210ENST00000540418 ERICH6BQ5W0A0 696 aa18.21■□□□□ 0.51
MDM1-210ENST00000540418 SERPINA10Q9UK55 444 aa18.21■□□□□ 0.51
MDM1-210ENST00000540418 CLEC11AQ9Y240 323 aa18.21■□□□□ 0.51
MDM1-210ENST00000540418 MAST3O60307 1309 aa18.21■□□□□ 0.51
MDM1-210ENST00000540418 CYP2E1P05181 493 aaPredicted RBP18.21■□□□□ 0.51
MDM1-210ENST00000540418 POTEIP0CG38 1075 aa18.21■□□□□ 0.51
MDM1-210ENST00000540418 POTEJP0CG39 1038 aa18.21■□□□□ 0.51
MDM1-210ENST00000540418 PRDX5P30044 214 aa18.21■□□□□ 0.51
MDM1-210ENST00000540418 TBC1D9Q6ZT07 1266 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms