RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 AFF1P51825 1210 aaKnown RBP10.77□□□□□ -0.69
TRAV11-201ENST00000539512 PPP2R3AQ06190 1150 aa10.77□□□□□ -0.69
TRAV11-201ENST00000539512 IKBKEQ14164 716 aa10.77□□□□□ -0.69
TRAV11-201ENST00000539512 CCDC85BQ15834 202 aaPredicted RBP10.77□□□□□ -0.69
TRAV11-201ENST00000539512 LCE2CQ5TA81 110 aa10.77□□□□□ -0.69
TRAV11-201ENST00000539512 MEI1Q5TIA1 1274 aa10.77□□□□□ -0.69
TRAV11-201ENST00000539512 C20orf204Q6ZNR8 217 aa10.77□□□□□ -0.69
TRAV11-201ENST00000539512 WHAMMQ8TF30 809 aa10.77□□□□□ -0.69
TRAV11-201ENST00000539512 RNF34Q969K3 372 aa10.77□□□□□ -0.69
TRAV11-201ENST00000539512 ZNF576Q9H609 170 aa10.77□□□□□ -0.69
TRAV11-201ENST00000539512 SH2B1Q9NRF2 756 aaPredicted RBP10.77□□□□□ -0.69
TRAV11-201ENST00000539512 METTL5Q9NRN9 209 aaKnown RBP10.77□□□□□ -0.69
TRAV11-201ENST00000539512 PCDH1Q08174 1060 aa10.76□□□□□ -0.69
TRAV11-201ENST00000539512 ZNF385CQ66K41 422 aaPredicted RBP10.76□□□□□ -0.69
TRAV11-201ENST00000539512 TPTE2Q6XPS3 522 aa10.76□□□□□ -0.69
TRAV11-201ENST00000539512 C3orf58Q8NDZ4 430 aa10.76□□□□□ -0.69
TRAV11-201ENST00000539512 SOX13Q9UN79 622 aa10.76□□□□□ -0.69
TRAV11-201ENST00000539512 H3BRJ5 948 aa10.75□□□□□ -0.69
TRAV11-201ENST00000539512 C8orf86Q6ZUL3 223 aa10.75□□□□□ -0.69
TRAV11-201ENST00000539512 PRDM6Q9NQX0 595 aa10.75□□□□□ -0.69
TRAV11-201ENST00000539512 EIF4EBP3O60516 100 aaPredicted RBP10.74□□□□□ -0.69
TRAV11-201ENST00000539512 FBXO24O75426 580 aa10.74□□□□□ -0.69
TRAV11-201ENST00000539512 MSL1Q68DK7 614 aa10.74□□□□□ -0.69
TRAV11-201ENST00000539512 HS2ST1Q7LGA3 356 aa10.74□□□□□ -0.69
TRAV11-201ENST00000539512 SAMM50Q9Y512 469 aa10.74□□□□□ -0.69
TRAV11-201ENST00000539512 USP31Q70CQ4 1352 aa10.74□□□□□ -0.69
TRAV11-201ENST00000539512 SPDYE3A6NKU9 549 aa10.73□□□□□ -0.69
TRAV11-201ENST00000539512 RLBP1P12271 317 aa10.73□□□□□ -0.69
TRAV11-201ENST00000539512 LMNB1P20700 586 aa10.73□□□□□ -0.69
TRAV11-201ENST00000539512 EPHA1P21709 976 aa10.73□□□□□ -0.69
TRAV11-201ENST00000539512 DCAF11Q8TEB1 546 aa10.73□□□□□ -0.69
TRAV11-201ENST00000539512 SLC7A3Q8WY07 619 aa10.73□□□□□ -0.69
TRAV11-201ENST00000539512 GGT7Q9UJ14 662 aa10.73□□□□□ -0.69
TRAV11-201ENST00000539512 TRAPPC3LQ5T215 181 aa10.72□□□□□ -0.69
TRAV11-201ENST00000539512 SV2BQ7L1I2 683 aa10.72□□□□□ -0.69
TRAV11-201ENST00000539512 VN1R5Q7Z5H4 357 aa10.72□□□□□ -0.69
TRAV11-201ENST00000539512 PODNQ7Z5L7 613 aa10.72□□□□□ -0.69
TRAV11-201ENST00000539512 NOC4LQ9BVI4 516 aaKnown RBP10.72□□□□□ -0.69
TRAV11-201ENST00000539512 TMEM39AQ9NV64 488 aa10.72□□□□□ -0.69
TRAV11-201ENST00000539512 LINC01387J3KSC0 135 aa10.71□□□□□ -0.69
TRAV11-201ENST00000539512 WIPF1O43516 503 aa10.71□□□□□ -0.69
TRAV11-201ENST00000539512 ZNF157P51786 506 aaPredicted RBP10.71□□□□□ -0.69
TRAV11-201ENST00000539512 PIP4K2BP78356 416 aa10.71□□□□□ -0.69
TRAV11-201ENST00000539512 FANCCQ00597 558 aa10.71□□□□□ -0.69
TRAV11-201ENST00000539512 GRIK5Q16478 980 aa10.71□□□□□ -0.69
TRAV11-201ENST00000539512 TXNDC11Q6PKC3 985 aa10.71□□□□□ -0.69
TRAV11-201ENST00000539512 SEC31BQ9NQW1 1179 aa10.71□□□□□ -0.69
TRAV11-201ENST00000539512 B3GALT4O96024 378 aa10.7□□□□□ -0.7
TRAV11-201ENST00000539512 DGKGP49619 791 aa10.7□□□□□ -0.7
TRAV11-201ENST00000539512 RAC1P63000 192 aa10.7□□□□□ -0.7
TRAV11-201ENST00000539512 PWP1Q13610 501 aa10.7□□□□□ -0.7
TRAV11-201ENST00000539512 MAP4K3Q8IVH8 894 aa10.7□□□□□ -0.7
TRAV11-201ENST00000539512 DMRTC2Q8IXT2 367 aaPredicted RBP10.7□□□□□ -0.7
TRAV11-201ENST00000539512 ZSCAN1Q8NBB4 408 aa10.7□□□□□ -0.7
TRAV11-201ENST00000539512 ANKRD24Q8TF21 1146 aa10.7□□□□□ -0.7
TRAV11-201ENST00000539512 WNT8BQ93098 351 aa10.7□□□□□ -0.7
TRAV11-201ENST00000539512 MKL2Q9ULH7 1088 aa10.7□□□□□ -0.7
TRAV11-201ENST00000539512 ESRRAP11474 423 aaPredicted RBP10.69□□□□□ -0.7
TRAV11-201ENST00000539512 ERCC5P28715 1186 aaPredicted RBP10.69□□□□□ -0.7
TRAV11-201ENST00000539512 INSM1Q01101 510 aaPredicted RBP10.69□□□□□ -0.7
TRAV11-201ENST00000539512 GSTM4Q03013 218 aa10.69□□□□□ -0.7
TRAV11-201ENST00000539512 C19orf57Q0VDD7 668 aa10.69□□□□□ -0.7
TRAV11-201ENST00000539512 DIEXFQ68CQ4 756 aaKnown RBP10.69□□□□□ -0.7
TRAV11-201ENST00000539512 SRA1Q9HD15 236 aaKnown RBP10.69□□□□□ -0.7
TRAV11-201ENST00000539512 HDLBPQ00341 1268 aaKnown RBP10.68□□□□□ -0.7
TRAV11-201ENST00000539512 HNRNPUQ00839 825 aaKnown RBP eCLIP10.68□□□□□ -0.7
TRAV11-201ENST00000539512 MAP3K11Q16584 847 aa10.68□□□□□ -0.7
TRAV11-201ENST00000539512 LDLRAD1Q5T700 205 aa10.68□□□□□ -0.7
TRAV11-201ENST00000539512 C9orf131Q5VYM1 1079 aa10.68□□□□□ -0.7
TRAV11-201ENST00000539512 RELL1Q8IUW5 271 aa10.68□□□□□ -0.7
TRAV11-201ENST00000539512 GNB5O14775 395 aa10.67□□□□□ -0.7
TRAV11-201ENST00000539512 NID1P14543 1247 aa10.67□□□□□ -0.7
TRAV11-201ENST00000539512 BAG6P46379 1132 aa10.67□□□□□ -0.7
TRAV11-201ENST00000539512 FAAP100Q0VG06 881 aa10.67□□□□□ -0.7
TRAV11-201ENST00000539512 ZNF423Q2M1K9 1284 aa10.67□□□□□ -0.7
TRAV11-201ENST00000539512 LCE2AQ5TA79 106 aaPredicted RBP10.67□□□□□ -0.7
TRAV11-201ENST00000539512 ADAMTSL4Q6UY14 1074 aa10.67□□□□□ -0.7
TRAV11-201ENST00000539512 NT5DC4Q86YG4 428 aa10.67□□□□□ -0.7
TRAV11-201ENST00000539512 KLHL23Q8NBE8 558 aa10.67□□□□□ -0.7
TRAV11-201ENST00000539512 NECAB3Q96P71 396 aaPredicted RBP10.67□□□□□ -0.7
TRAV11-201ENST00000539512 CCSER2Q9H7U1 834 aa10.67□□□□□ -0.7
TRAV11-201ENST00000539512 OSGEPQ9NPF4 335 aa10.67□□□□□ -0.7
TRAV11-201ENST00000539512 NOP53Q9NZM5 478 aaKnown RBP10.67□□□□□ -0.7
TRAV11-201ENST00000539512 FSCN2O14926 492 aa10.66□□□□□ -0.7
TRAV11-201ENST00000539512 CELA3AP09093 270 aa10.66□□□□□ -0.7
TRAV11-201ENST00000539512 AP3B2Q13367 1082 aa10.66□□□□□ -0.7
TRAV11-201ENST00000539512 DTWD1Q8N5C7 304 aa10.66□□□□□ -0.7
TRAV11-201ENST00000539512 CARD10Q9BWT7 1032 aa10.66□□□□□ -0.7
TRAV11-201ENST00000539512 SOX17Q9H6I2 414 aaPredicted RBP10.66□□□□□ -0.7
TRAV11-201ENST00000539512 CBX8Q9HC52 389 aa10.66□□□□□ -0.7
TRAV11-201ENST00000539512 SOX1O00570 391 aaPredicted RBP10.65□□□□□ -0.7
TRAV11-201ENST00000539512 ARHGEF15O94989 841 aa10.65□□□□□ -0.7
TRAV11-201ENST00000539512 PRRT3Q5FWE3 981 aa10.65□□□□□ -0.7
TRAV11-201ENST00000539512 USP48Q86UV5 1035 aa10.65□□□□□ -0.7
TRAV11-201ENST00000539512 SULF2Q8IWU5 870 aa10.65□□□□□ -0.7
TRAV11-201ENST00000539512 EMILIN2Q9BXX0 1053 aa10.65□□□□□ -0.7
TRAV11-201ENST00000539512 ENC1O14682 589 aa10.64□□□□□ -0.71
TRAV11-201ENST00000539512 CYP11A1P05108 521 aa10.64□□□□□ -0.71
TRAV11-201ENST00000539512 GBP2P32456 591 aaPredicted RBP10.64□□□□□ -0.71
TRAV11-201ENST00000539512 TRIM28Q13263 835 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms