RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 ZHX1Q9UKY1 873 aaPredicted RBP16.61■□□□□ 0.25
CACNB1-206ENST00000539338 HSPA1LP34931 641 aa16.6■□□□□ 0.25
CACNB1-206ENST00000539338 ALS2CR12Q96Q35 445 aa16.6■□□□□ 0.25
CACNB1-206ENST00000539338 BCCIPQ9P287 314 aaKnown RBP eCLIP16.6■□□□□ 0.25
CACNB1-206ENST00000539338 RNF113AO15541 343 aaKnown RBP16.6■□□□□ 0.25
CACNB1-206ENST00000539338 DCAF5Q96JK2 942 aa16.6■□□□□ 0.25
CACNB1-206ENST00000539338 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.6■□□□□ 0.25
CACNB1-206ENST00000539338 V9GYY5 206 aaPredicted RBP16.6■□□□□ 0.25
CACNB1-206ENST00000539338 TMCO5BA8MYB1 307 aa16.6■□□□□ 0.25
CACNB1-206ENST00000539338 PTGS1P23219 599 aa16.6■□□□□ 0.25
CACNB1-206ENST00000539338 IFFO1Q0D2I5 559 aa16.6■□□□□ 0.25
CACNB1-206ENST00000539338 DYDC1Q8WWB3 177 aa16.6■□□□□ 0.25
CACNB1-206ENST00000539338 HLTFQ14527 1009 aaKnown RBP eCLIP16.6■□□□□ 0.25
CACNB1-206ENST00000539338 PYM1Q9BRP8 204 aaKnown RBP16.6■□□□□ 0.25
CACNB1-206ENST00000539338 CNNM2Q9H8M5 875 aa16.6■□□□□ 0.25
CACNB1-206ENST00000539338 HOXC9P31274 260 aa16.6■□□□□ 0.25
CACNB1-206ENST00000539338 SCLT1Q96NL6 688 aa16.6■□□□□ 0.25
CACNB1-206ENST00000539338 POTEJP0CG39 1038 aa16.59■□□□□ 0.25
CACNB1-206ENST00000539338 RXRAP19793 462 aa16.59■□□□□ 0.25
CACNB1-206ENST00000539338 HELBQ8NG08 1087 aaPredicted RBP16.59■□□□□ 0.25
CACNB1-206ENST00000539338 BMS1Q14692 1282 aaKnown RBP16.59■□□□□ 0.25
CACNB1-206ENST00000539338 FAM114A1Q8IWE2 563 aa16.59■□□□□ 0.25
CACNB1-206ENST00000539338 EHMT1Q9H9B1 1298 aa16.59■□□□□ 0.25
CACNB1-206ENST00000539338 RFX1P22670 979 aa16.59■□□□□ 0.25
CACNB1-206ENST00000539338 ZNF526Q8TF50 670 aaPredicted RBP16.59■□□□□ 0.25
CACNB1-206ENST00000539338 YTHDC2Q9H6S0 1430 aaKnown RBP16.59■□□□□ 0.25
CACNB1-206ENST00000539338 ADGBQ8N7X0 1667 aa16.59■□□□□ 0.25
CACNB1-206ENST00000539338 POTEB2H3BUK9 544 aa16.59■□□□□ 0.25
CACNB1-206ENST00000539338 GBP2P32456 591 aaPredicted RBP16.59■□□□□ 0.25
CACNB1-206ENST00000539338 IL13P35225 146 aa16.59■□□□□ 0.25
CACNB1-206ENST00000539338 DZIP3Q86Y13 1208 aaKnown RBP16.59■□□□□ 0.25
CACNB1-206ENST00000539338 EXOC1Q9NV70 894 aa16.59■□□□□ 0.25
CACNB1-206ENST00000539338 NBPF7P0C2Y1 421 aaPredicted RBP16.58■□□□□ 0.25
CACNB1-206ENST00000539338 TMTC2Q8N394 836 aa16.58■□□□□ 0.25
CACNB1-206ENST00000539338 CNKSR1Q969H4 720 aa16.58■□□□□ 0.25
CACNB1-206ENST00000539338 DHX58Q96C10 678 aa16.58■□□□□ 0.25
CACNB1-206ENST00000539338 ATP7AQ04656 1500 aa16.58■□□□□ 0.25
CACNB1-206ENST00000539338 STAT6P42226 847 aa16.58■□□□□ 0.24
CACNB1-206ENST00000539338 NOP2P46087 812 aaKnown RBP16.58■□□□□ 0.24
CACNB1-206ENST00000539338 DHX32Q7L7V1 743 aaKnown RBP16.58■□□□□ 0.24
CACNB1-206ENST00000539338 MAGI3Q5TCQ9 1506 aa16.58■□□□□ 0.24
CACNB1-206ENST00000539338 MACROD2A1Z1Q3 448 aa16.58■□□□□ 0.24
CACNB1-206ENST00000539338 CHMP4BP1P59074 171 aa16.58■□□□□ 0.24
CACNB1-206ENST00000539338 ZRSR2Q15696 482 aaKnown RBP16.58■□□□□ 0.24
CACNB1-206ENST00000539338 USP8P40818 1118 aa16.58■□□□□ 0.24
CACNB1-206ENST00000539338 VEZTQ9HBM0 779 aa16.58■□□□□ 0.24
CACNB1-206ENST00000539338 TSPY3P0CV98 308 aa16.57■□□□□ 0.24
CACNB1-206ENST00000539338 TSPY8P0CW00 308 aa16.57■□□□□ 0.24
CACNB1-206ENST00000539338 CETN2P41208 172 aa16.57■□□□□ 0.24
CACNB1-206ENST00000539338 RBSNQ9H1K0 784 aa16.57■□□□□ 0.24
CACNB1-206ENST00000539338 AKR1B10O60218 316 aa16.57■□□□□ 0.24
CACNB1-206ENST00000539338 DTNBO60941 627 aa16.57■□□□□ 0.24
CACNB1-206ENST00000539338 CTNNBL1Q8WYA6 563 aaPredicted RBP16.57■□□□□ 0.24
CACNB1-206ENST00000539338 RMND1Q9NWS8 449 aa16.57■□□□□ 0.24
CACNB1-206ENST00000539338 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.57■□□□□ 0.24
CACNB1-206ENST00000539338 CTR9Q6PD62 1173 aa16.57■□□□□ 0.24
CACNB1-206ENST00000539338 RNMTO43148 476 aaKnown RBP16.57■□□□□ 0.24
CACNB1-206ENST00000539338 LMAN1P49257 510 aa16.57■□□□□ 0.24
CACNB1-206ENST00000539338 PRPF4BQ13523 1007 aaKnown RBP16.57■□□□□ 0.24
CACNB1-206ENST00000539338 HEATR3Q7Z4Q2 680 aa16.57■□□□□ 0.24
CACNB1-206ENST00000539338 NAA16Q6N069 864 aaPredicted RBP16.56■□□□□ 0.24
CACNB1-206ENST00000539338 CCDC129Q6ZRS4 1044 aa16.56■□□□□ 0.24
CACNB1-206ENST00000539338 MIGA1Q8NAN2 632 aa16.56■□□□□ 0.24
CACNB1-206ENST00000539338 NPC1L1Q9UHC9 1359 aa16.56■□□□□ 0.24
CACNB1-206ENST00000539338 GSTTP1A0A1W2PQM5 241 aa16.56■□□□□ 0.24
CACNB1-206ENST00000539338 PPP4R3AQ6IN85 833 aa16.56■□□□□ 0.24
CACNB1-206ENST00000539338 RNF123Q5XPI4 1314 aa16.56■□□□□ 0.24
CACNB1-206ENST00000539338 IBSPP21815 317 aaPredicted RBP16.56■□□□□ 0.24
CACNB1-206ENST00000539338 SPECC1Q5M775 1068 aa16.56■□□□□ 0.24
CACNB1-206ENST00000539338 KLHDC4Q8TBB5 520 aa16.56■□□□□ 0.24
CACNB1-206ENST00000539338 ANKRD2Q9GZV1 360 aa16.55■□□□□ 0.24
CACNB1-206ENST00000539338 TRAF1Q13077 416 aa16.55■□□□□ 0.24
CACNB1-206ENST00000539338 ATF5Q9Y2D1 282 aaPredicted RBP16.55■□□□□ 0.24
CACNB1-206ENST00000539338 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.55■□□□□ 0.24
CACNB1-206ENST00000539338 BMP15O95972 392 aa16.55■□□□□ 0.24
CACNB1-206ENST00000539338 CTAGE1Q96RT6 745 aa16.55■□□□□ 0.24
CACNB1-206ENST00000539338 NAA15Q9BXJ9 866 aaKnown RBP16.55■□□□□ 0.24
CACNB1-206ENST00000539338 CALCOCO1Q9P1Z2 691 aa16.55■□□□□ 0.24
CACNB1-206ENST00000539338 STX17P56962 302 aa16.55■□□□□ 0.24
CACNB1-206ENST00000539338 MAP2K1Q02750 393 aaPredicted RBP16.55■□□□□ 0.24
CACNB1-206ENST00000539338 ABT1Q9ULW3 272 aaKnown RBP16.55■□□□□ 0.24
CACNB1-206ENST00000539338 RAD50Q92878 1312 aa16.55■□□□□ 0.24
CACNB1-206ENST00000539338 TRIM75PA6NK02 468 aa16.55■□□□□ 0.24
CACNB1-206ENST00000539338 MAP3K9P80192 1104 aa16.55■□□□□ 0.24
CACNB1-206ENST00000539338 MAGEB6Q8N7X4 407 aa16.55■□□□□ 0.24
CACNB1-206ENST00000539338 DRC1Q96MC2 740 aa16.55■□□□□ 0.24
CACNB1-206ENST00000539338 IFNKQ9P0W0 207 aa16.55■□□□□ 0.24
CACNB1-206ENST00000539338 UGGT1Q9NYU2 1555 aa16.54■□□□□ 0.24
CACNB1-206ENST00000539338 FAM173BQ6P4H8 233 aa16.54■□□□□ 0.24
CACNB1-206ENST00000539338 MMRN2Q9H8L6 949 aa16.54■□□□□ 0.24
CACNB1-206ENST00000539338 THRAP3Q9Y2W1 955 aaKnown RBP16.54■□□□□ 0.24
CACNB1-206ENST00000539338 PNMA6EA0A0J9YXQ4 647 aa16.54■□□□□ 0.24
CACNB1-206ENST00000539338 RNF187Q5TA31 235 aaPredicted RBP16.54■□□□□ 0.24
CACNB1-206ENST00000539338 DESP17661 470 aa16.54■□□□□ 0.24
CACNB1-206ENST00000539338 TIMM10P62072 90 aa16.54■□□□□ 0.24
CACNB1-206ENST00000539338 HS1BP3Q53T59 392 aa16.54■□□□□ 0.24
CACNB1-206ENST00000539338 KRT222Q8N1A0 295 aa16.54■□□□□ 0.24
CACNB1-206ENST00000539338 DCPSQ96C86 337 aaKnown RBP16.54■□□□□ 0.24
CACNB1-206ENST00000539338 SNX14Q9Y5W7 946 aa16.54■□□□□ 0.24
CACNB1-206ENST00000539338 BLMP54132 1417 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms