RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 MICAL1Q8TDZ2 1067 aa1.63□□□□□ -2.15
HIF1A-204ENST00000539097 SGSM3Q96HU1 749 aa1.63□□□□□ -2.15
HIF1A-204ENST00000539097 SCYL1Q96KG9 808 aa1.63□□□□□ -2.15
HIF1A-204ENST00000539097 SLC30A3Q99726 388 aa1.63□□□□□ -2.15
HIF1A-204ENST00000539097 KCNH4Q9UQ05 1017 aa1.63□□□□□ -2.15
HIF1A-204ENST00000539097 RTCBQ9Y3I0 505 aaKnown RBP1.63□□□□□ -2.15
HIF1A-204ENST00000539097 NFKBIEO00221 500 aa1.63□□□□□ -2.15
HIF1A-204ENST00000539097 UPP2O95045 317 aa1.63□□□□□ -2.15
HIF1A-204ENST00000539097 CELA3AP09093 270 aa1.63□□□□□ -2.15
HIF1A-204ENST00000539097 EDN3P14138 238 aa1.63□□□□□ -2.15
HIF1A-204ENST00000539097 NAT1P18440 290 aa1.63□□□□□ -2.15
HIF1A-204ENST00000539097 ERCC5P28715 1186 aaPredicted RBP1.63□□□□□ -2.15
HIF1A-204ENST00000539097 PTPN11Q06124 597 aaPredicted RBP1.63□□□□□ -2.15
HIF1A-204ENST00000539097 AAMPQ13685 434 aa1.63□□□□□ -2.15
HIF1A-204ENST00000539097 GRM2Q14416 872 aa1.63□□□□□ -2.15
HIF1A-204ENST00000539097 ZSCAN10Q96SZ4 725 aaPredicted RBP1.63□□□□□ -2.15
HIF1A-204ENST00000539097 ABCB6Q9NP58 842 aa1.63□□□□□ -2.15
HIF1A-204ENST00000539097 KBTBD4Q9NVX7 518 aa1.63□□□□□ -2.15
HIF1A-204ENST00000539097 ADAMTS1Q9UHI8 967 aa1.63□□□□□ -2.15
HIF1A-204ENST00000539097 PCDHGC4Q9Y5F7 938 aa1.63□□□□□ -2.15
HIF1A-204ENST00000539097 GREM1O60565 184 aa1.63□□□□□ -2.15
HIF1A-204ENST00000539097 TRIM37O94972 964 aa1.63□□□□□ -2.15
HIF1A-204ENST00000539097 HYAL2Q12891 473 aa1.63□□□□□ -2.15
HIF1A-204ENST00000539097 PDZRN4Q6ZMN7 1036 aaPredicted RBP1.63□□□□□ -2.15
HIF1A-204ENST00000539097 FBXO27Q8NI29 283 aa1.63□□□□□ -2.15
HIF1A-204ENST00000539097 ZNF507Q8TCN5 953 aa1.63□□□□□ -2.15
HIF1A-204ENST00000539097 TRPM4Q8TD43 1214 aa1.63□□□□□ -2.15
HIF1A-204ENST00000539097 CCDC74AQ96AQ1 378 aa1.63□□□□□ -2.15
HIF1A-204ENST00000539097 LNPKQ9C0E8 428 aa1.63□□□□□ -2.15
HIF1A-204ENST00000539097 DDX41Q9UJV9 622 aaKnown RBP1.63□□□□□ -2.15
HIF1A-204ENST00000539097 C2CD2LO14523 706 aa1.62□□□□□ -2.15
HIF1A-204ENST00000539097 SASH3O75995 380 aa1.62□□□□□ -2.15
HIF1A-204ENST00000539097 CLSTN1O94985 981 aa1.62□□□□□ -2.15
HIF1A-204ENST00000539097 FGRP09769 529 aa1.62□□□□□ -2.15
HIF1A-204ENST00000539097 POLD1P28340 1107 aa1.62□□□□□ -2.15
HIF1A-204ENST00000539097 DNAJA1P31689 397 aaKnown RBP1.62□□□□□ -2.15
HIF1A-204ENST00000539097 TAF1CQ15572 869 aaPredicted RBP1.62□□□□□ -2.15
HIF1A-204ENST00000539097 TMEM201Q5SNT2 666 aa1.62□□□□□ -2.15
HIF1A-204ENST00000539097 DPH6Q7L8W6 267 aa1.62□□□□□ -2.15
HIF1A-204ENST00000539097 JAZF1Q86VZ6 243 aa1.62□□□□□ -2.15
HIF1A-204ENST00000539097 KCT2Q8NC54 265 aa1.62□□□□□ -2.15
HIF1A-204ENST00000539097 ZCRB1Q8TBF4 217 aaKnown RBP1.62□□□□□ -2.15
HIF1A-204ENST00000539097 FAM126AQ9BYI3 521 aaPredicted RBP1.62□□□□□ -2.15
HIF1A-204ENST00000539097 MSL2Q9HCI7 577 aa1.62□□□□□ -2.15
HIF1A-204ENST00000539097 TLR7Q9NYK1 1049 aaKnown RBP1.62□□□□□ -2.15
HIF1A-204ENST00000539097 KLF15Q9UIH9 416 aa1.62□□□□□ -2.15
HIF1A-204ENST00000539097 HIF3AQ9Y2N7 669 aa1.62□□□□□ -2.15
HIF1A-204ENST00000539097 MRVI1Q9Y6F6 885 aa1.62□□□□□ -2.15
HIF1A-204ENST00000539097 ENC1O14682 589 aa1.62□□□□□ -2.15
HIF1A-204ENST00000539097 KCNQ2O43526 872 aa1.62□□□□□ -2.15
HIF1A-204ENST00000539097 SORBS3O60504 671 aa1.62□□□□□ -2.15
HIF1A-204ENST00000539097 MMP20O60882 483 aa1.62□□□□□ -2.15
HIF1A-204ENST00000539097 MAFO75444 373 aaPredicted RBP1.62□□□□□ -2.15
HIF1A-204ENST00000539097 ZNF157P51786 506 aaPredicted RBP1.62□□□□□ -2.15
HIF1A-204ENST00000539097 ATP11AP98196 1134 aa1.62□□□□□ -2.15
HIF1A-204ENST00000539097 CCINQ13939 588 aa1.62□□□□□ -2.15
HIF1A-204ENST00000539097 FBXL19Q6PCT2 694 aa1.62□□□□□ -2.15
HIF1A-204ENST00000539097 LYSMD3Q7Z3D4 306 aa1.62□□□□□ -2.15
HIF1A-204ENST00000539097 ZC3H10Q96K80 434 aaKnown RBP1.62□□□□□ -2.15
HIF1A-204ENST00000539097 MKNK2Q9HBH9 465 aa1.62□□□□□ -2.15
HIF1A-204ENST00000539097 UBP1Q9NZI7 540 aa1.62□□□□□ -2.15
HIF1A-204ENST00000539097 TM4SF5O14894 197 aa1.62□□□□□ -2.15
HIF1A-204ENST00000539097 BNIP3LO60238 219 aa1.62□□□□□ -2.15
HIF1A-204ENST00000539097 DNAJA2O60884 412 aa1.62□□□□□ -2.15
HIF1A-204ENST00000539097 HSD3B2P26439 372 aa1.62□□□□□ -2.15
HIF1A-204ENST00000539097 PMLP29590 882 aa1.62□□□□□ -2.15
HIF1A-204ENST00000539097 DBN1Q16643 649 aa1.62□□□□□ -2.15
HIF1A-204ENST00000539097 UVSSAQ2YD98 709 aa1.62□□□□□ -2.15
HIF1A-204ENST00000539097 MRPL14Q6P1L8 145 aaKnown RBP1.62□□□□□ -2.15
HIF1A-204ENST00000539097 C1orf229Q6ZS94 237 aaPredicted RBP1.62□□□□□ -2.15
HIF1A-204ENST00000539097 CYP4X1Q8N118 509 aa1.62□□□□□ -2.15
HIF1A-204ENST00000539097 CMTR1Q8N1G2 835 aaKnown RBP1.62□□□□□ -2.15
HIF1A-204ENST00000539097 CELF2-AS1Q8N7Q2 184 aa1.62□□□□□ -2.15
HIF1A-204ENST00000539097 NSUN5Q96P11 429 aaKnown RBP1.62□□□□□ -2.15
HIF1A-204ENST00000539097 ZKSCAN3Q9BRR0 538 aa1.62□□□□□ -2.15
HIF1A-204ENST00000539097 BCO2Q9BYV7 579 aa1.62□□□□□ -2.15
HIF1A-204ENST00000539097 METTL14Q9HCE5 456 aaKnown RBP1.62□□□□□ -2.15
HIF1A-204ENST00000539097 MSRB2Q9Y3D2 182 aa1.62□□□□□ -2.15
HIF1A-204ENST00000539097 USP17L7P0C7H9 530 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 CD33P20138 364 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 ETFBP38117 255 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 GPLD1P80108 840 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 MLLT1Q03111 559 aaPredicted RBP1.61□□□□□ -2.15
HIF1A-204ENST00000539097 FAM160A1Q05DH4 1040 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 SPRED3Q2MJR0 410 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 ANKRD39Q53RE8 183 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 CCDC81Q6ZN84 652 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 HFE2Q6ZVN8 426 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 ABHD17AQ96GS6 310 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 CCDC140Q96MF4 163 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 TCF12Q99081 682 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 ZNF700Q9H0M5 742 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 ELP3Q9H9T3 547 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 POLMQ9NP87 494 aaPredicted RBP1.61□□□□□ -2.15
HIF1A-204ENST00000539097 VTI1BQ9UEU0 232 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 WASF2Q9Y6W5 498 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 A0A1W2PNR3 127 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 FAM221BA6H8Z2 402 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 J3QW42 95 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 CAPN5O15484 640 aaPredicted RBP1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms