RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 F8W031 263 aaPredicted RBP18.78■□□□□ 0.6
RAB40B-202ENST00000538809 HNRNPUQ00839 825 aaKnown RBP eCLIP18.78■□□□□ 0.6
RAB40B-202ENST00000538809 UBE4AQ14139 1066 aa18.78■□□□□ 0.6
RAB40B-202ENST00000538809 METTL24Q5JXM2 366 aa18.78■□□□□ 0.6
RAB40B-202ENST00000538809 PRAMEF18Q5VWM3 479 aa18.78■□□□□ 0.6
RAB40B-202ENST00000538809 MAP2K2P36507 400 aa18.77■□□□□ 0.6
RAB40B-202ENST00000538809 RGMBQ6NW40 437 aa18.77■□□□□ 0.6
RAB40B-202ENST00000538809 ZIC5Q96T25 663 aa18.77■□□□□ 0.6
RAB40B-202ENST00000538809 API5Q9BZZ5 524 aaKnown RBP18.77■□□□□ 0.6
RAB40B-202ENST00000538809 PCDHAC2Q9Y5I4 1007 aa18.77■□□□□ 0.6
RAB40B-202ENST00000538809 UBTFL1P0CB47 393 aaPredicted RBP18.76■□□□□ 0.59
RAB40B-202ENST00000538809 FAM84BQ96KN1 310 aaPredicted RBP18.76■□□□□ 0.59
RAB40B-202ENST00000538809 BEGAINQ9BUH8 593 aa18.76■□□□□ 0.59
RAB40B-202ENST00000538809 PRDM10Q9NQV6 1147 aa18.76■□□□□ 0.59
RAB40B-202ENST00000538809 TSKSQ9UJT2 592 aa18.76■□□□□ 0.59
RAB40B-202ENST00000538809 KIF16BQ96L93 1317 aa18.75■□□□□ 0.59
RAB40B-202ENST00000538809 OTOFQ9HC10 1997 aa18.75■□□□□ 0.59
RAB40B-202ENST00000538809 HIBADHP31937 336 aaKnown RBP18.75■□□□□ 0.59
RAB40B-202ENST00000538809 RFX5P48382 616 aaPredicted RBP18.75■□□□□ 0.59
RAB40B-202ENST00000538809 MOB2Q70IA6 237 aa18.75■□□□□ 0.59
RAB40B-202ENST00000538809 VGLL2Q8N8G2 317 aa18.75■□□□□ 0.59
RAB40B-202ENST00000538809 ARHGAP45Q92619 1136 aa18.75■□□□□ 0.59
RAB40B-202ENST00000538809 ZBED3Q96IU2 234 aaPredicted RBP18.75■□□□□ 0.59
RAB40B-202ENST00000538809 IQSEC3Q9UPP2 1182 aaPredicted RBP18.75■□□□□ 0.59
RAB40B-202ENST00000538809 FAM155AB1AL88 458 aaPredicted RBP18.74■□□□□ 0.59
RAB40B-202ENST00000538809 CAPN15O75808 1086 aa18.74■□□□□ 0.59
RAB40B-202ENST00000538809 ZNF157P51786 506 aaPredicted RBP18.74■□□□□ 0.59
RAB40B-202ENST00000538809 NOGQ13253 232 aa18.74■□□□□ 0.59
RAB40B-202ENST00000538809 DLGAP5Q15398 846 aa18.74■□□□□ 0.59
RAB40B-202ENST00000538809 TDRD7Q8NHU6 1098 aaKnown RBP18.74■□□□□ 0.59
RAB40B-202ENST00000538809 FAM205AQ6ZU69 1335 aa18.74■□□□□ 0.59
RAB40B-202ENST00000538809 MMP14P50281 582 aa18.73■□□□□ 0.59
RAB40B-202ENST00000538809 FKBP1AP62942 108 aaKnown RBP18.73■□□□□ 0.59
RAB40B-202ENST00000538809 CFAP100Q494V2 611 aa18.73■□□□□ 0.59
RAB40B-202ENST00000538809 MFSD14BQ5SR56 506 aa18.73■□□□□ 0.59
RAB40B-202ENST00000538809 APOBEC3FQ8IUX4 373 aaKnown RBP18.73■□□□□ 0.59
RAB40B-202ENST00000538809 MEIS3Q99687 375 aa18.73■□□□□ 0.59
RAB40B-202ENST00000538809 TNNQ9UQP3 1299 aa18.73■□□□□ 0.59
RAB40B-202ENST00000538809 LRRFIP2Q9Y608 721 aaKnown RBP18.73■□□□□ 0.59
RAB40B-202ENST00000538809 AOX1Q06278 1338 aa18.73■□□□□ 0.59
RAB40B-202ENST00000538809 ZBED9Q6R2W3 1325 aa18.73■□□□□ 0.59
RAB40B-202ENST00000538809 COL1A1P02452 1464 aaPredicted RBP18.72■□□□□ 0.59
RAB40B-202ENST00000538809 PDE8BO95263 885 aa18.72■□□□□ 0.59
RAB40B-202ENST00000538809 SLC10A3P09131 477 aa18.72■□□□□ 0.59
RAB40B-202ENST00000538809 PTPN12Q05209 780 aaKnown RBP18.72■□□□□ 0.59
RAB40B-202ENST00000538809 CHAF1AQ13111 956 aaPredicted RBP18.72■□□□□ 0.59
RAB40B-202ENST00000538809 VPS37DQ86XT2 251 aa18.72■□□□□ 0.59
RAB40B-202ENST00000538809 SIL1Q9H173 461 aa18.72■□□□□ 0.59
RAB40B-202ENST00000538809 CLRN2A0PK11 232 aa18.71■□□□□ 0.59
RAB40B-202ENST00000538809 EYA2O00167 538 aa18.71■□□□□ 0.59
RAB40B-202ENST00000538809 BCAR3O75815 825 aa18.71■□□□□ 0.59
RAB40B-202ENST00000538809 TTLL12Q14166 644 aaPredicted RBP18.71■□□□□ 0.59
RAB40B-202ENST00000538809 INTS3Q68E01 1043 aaKnown RBP18.71■□□□□ 0.59
RAB40B-202ENST00000538809 RASAL3Q86YV0 1011 aa18.71■□□□□ 0.59
RAB40B-202ENST00000538809 MTMR14Q8NCE2 650 aa18.71■□□□□ 0.59
RAB40B-202ENST00000538809 LAMB1P07942 1786 aa18.7■□□□□ 0.58
RAB40B-202ENST00000538809 SSC5DA1L4H1 1573 aa18.7■□□□□ 0.58
RAB40B-202ENST00000538809 SPDYE2BA6NHP3 402 aa18.7■□□□□ 0.58
RAB40B-202ENST00000538809 UBE2Q2LH0YL09 131 aa18.7■□□□□ 0.58
RAB40B-202ENST00000538809 SPDYE6P0CI01 402 aa18.7■□□□□ 0.58
RAB40B-202ENST00000538809 NF2P35240 595 aa18.7■□□□□ 0.58
RAB40B-202ENST00000538809 RBM5P52756 815 aaKnown RBP eCLIP18.7■□□□□ 0.58
RAB40B-202ENST00000538809 FKBP1BP68106 108 aa18.7■□□□□ 0.58
RAB40B-202ENST00000538809 PUM3Q15397 648 aaKnown RBP18.7■□□□□ 0.58
RAB40B-202ENST00000538809 FBXO33Q7Z6M2 555 aa18.7■□□□□ 0.58
RAB40B-202ENST00000538809 FRAT1Q92837 279 aaPredicted RBP18.7■□□□□ 0.58
RAB40B-202ENST00000538809 CCDC102AQ96A19 550 aa18.7■□□□□ 0.58
RAB40B-202ENST00000538809 FRAT2O75474 233 aaPredicted RBP18.69■□□□□ 0.58
RAB40B-202ENST00000538809 TRIM27P14373 513 aa18.69■□□□□ 0.58
RAB40B-202ENST00000538809 FGFR2P21802 821 aa18.69■□□□□ 0.58
RAB40B-202ENST00000538809 BCAMP50895 628 aa18.69■□□□□ 0.58
RAB40B-202ENST00000538809 KIF23Q02241 960 aaPredicted RBP18.69■□□□□ 0.58
RAB40B-202ENST00000538809 PRKG1Q13976 671 aa18.69■□□□□ 0.58
RAB40B-202ENST00000538809 GRIK5Q16478 980 aa18.69■□□□□ 0.58
RAB40B-202ENST00000538809 CAVIN4Q5BKX8 364 aa18.69■□□□□ 0.58
RAB40B-202ENST00000538809 ATG9AQ7Z3C6 839 aa18.69■□□□□ 0.58
RAB40B-202ENST00000538809 PRMT6Q96LA8 375 aaPredicted RBP18.69■□□□□ 0.58
RAB40B-202ENST00000538809 VEZTQ9HBM0 779 aa18.69■□□□□ 0.58
RAB40B-202ENST00000538809 TTF2Q9UNY4 1162 aaKnown RBP18.69■□□□□ 0.58
RAB40B-202ENST00000538809 PA2G4Q9UQ80 394 aaKnown RBP18.69■□□□□ 0.58
RAB40B-202ENST00000538809 AK9Q5TCS8 1911 aa18.68■□□□□ 0.58
RAB40B-202ENST00000538809 FZD1Q9UP38 647 aa18.68■□□□□ 0.58
RAB40B-202ENST00000538809 MYH2Q9UKX2 1941 aa18.68■□□□□ 0.58
RAB40B-202ENST00000538809 MYO1BO43795 1136 aa18.67■□□□□ 0.58
RAB40B-202ENST00000538809 IFIT1P09914 478 aaKnown RBP18.67■□□□□ 0.58
RAB40B-202ENST00000538809 SLC5A1P13866 664 aa18.67■□□□□ 0.58
RAB40B-202ENST00000538809 ATF7IPQ6VMQ6 1270 aa18.67■□□□□ 0.58
RAB40B-202ENST00000538809 CLUAP1Q96AJ1 413 aa18.67■□□□□ 0.58
RAB40B-202ENST00000538809 DEFB129Q9H1M3 183 aa18.67■□□□□ 0.58
RAB40B-202ENST00000538809 CA12O43570 354 aa18.66■□□□□ 0.58
RAB40B-202ENST00000538809 IPO8O15397 1037 aaKnown RBP18.65■□□□□ 0.58
RAB40B-202ENST00000538809 CRKP46108 304 aa18.65■□□□□ 0.58
RAB40B-202ENST00000538809 LPIN2Q92539 896 aa18.65■□□□□ 0.58
RAB40B-202ENST00000538809 SERPINA10Q9UK55 444 aa18.65■□□□□ 0.58
RAB40B-202ENST00000538809 ANGEL1Q9UNK9 670 aaKnown RBP18.65■□□□□ 0.58
RAB40B-202ENST00000538809 HDAC5Q9UQL6 1122 aa18.65■□□□□ 0.58
RAB40B-202ENST00000538809 CIAO1O76071 339 aa18.64■□□□□ 0.57
RAB40B-202ENST00000538809 GNAI3P08754 354 aa18.64■□□□□ 0.57
RAB40B-202ENST00000538809 MKRN3Q13064 507 aaKnown RBP18.64■□□□□ 0.57
RAB40B-202ENST00000538809 ATP2B3Q16720 1220 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms