RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 MED4Q9NPJ6 270 aa7.8□□□□□ -1.16
SORT1-209ENST00000538502 PARP2Q9UGN5 583 aa7.8□□□□□ -1.16
SORT1-209ENST00000538502 CC2D2AQ9P2K1 1620 aa7.8□□□□□ -1.16
SORT1-209ENST00000538502 ZWINTO95229 277 aa7.8□□□□□ -1.16
SORT1-209ENST00000538502 ZSCAN26Q16670 478 aa7.8□□□□□ -1.16
SORT1-209ENST00000538502 RTN1Q16799 776 aa7.8□□□□□ -1.16
SORT1-209ENST00000538502 CCDC122Q5T0U0 273 aa7.8□□□□□ -1.16
SORT1-209ENST00000538502 MSANTD4Q8NCY6 345 aa7.8□□□□□ -1.16
SORT1-209ENST00000538502 EFCC1Q9HA90 598 aa7.8□□□□□ -1.16
SORT1-209ENST00000538502 POLR3AO14802 1390 aaPredicted RBP7.8□□□□□ -1.16
SORT1-209ENST00000538502 LDHCP07864 332 aa7.79□□□□□ -1.16
SORT1-209ENST00000538502 ATP8B2P98198 1209 aa7.79□□□□□ -1.16
SORT1-209ENST00000538502 Q6ZUG5 572 aa7.79□□□□□ -1.16
SORT1-209ENST00000538502 LARSQ9P2J5 1176 aaKnown RBP7.79□□□□□ -1.16
SORT1-209ENST00000538502 SSX2IPQ9Y2D8 614 aa7.79□□□□□ -1.16
SORT1-209ENST00000538502 STK24Q9Y6E0 443 aa7.79□□□□□ -1.16
SORT1-209ENST00000538502 ZMYM4Q5VZL5 1548 aa7.79□□□□□ -1.16
SORT1-209ENST00000538502 TRIM75PA6NK02 468 aa7.79□□□□□ -1.16
SORT1-209ENST00000538502 GNAT2P19087 354 aa7.79□□□□□ -1.16
SORT1-209ENST00000538502 TPD52P55327 224 aaPredicted RBP7.79□□□□□ -1.16
SORT1-209ENST00000538502 LRCH2Q5VUJ6 765 aa7.79□□□□□ -1.16
SORT1-209ENST00000538502 ZNF365Q70YC5 407 aa7.79□□□□□ -1.16
SORT1-209ENST00000538502 GSTA5Q7RTV2 222 aa7.79□□□□□ -1.16
SORT1-209ENST00000538502 IFT81Q8WYA0 676 aa7.79□□□□□ -1.16
SORT1-209ENST00000538502 ALDH1L1O75891 902 aa7.79□□□□□ -1.16
SORT1-209ENST00000538502 IDEP14735 1019 aa7.79□□□□□ -1.16
SORT1-209ENST00000538502 ARID4AP29374 1257 aaPredicted RBP7.79□□□□□ -1.16
SORT1-209ENST00000538502 KRT2P35908 639 aa7.79□□□□□ -1.16
SORT1-209ENST00000538502 GSTO1P78417 241 aa7.79□□□□□ -1.16
SORT1-209ENST00000538502 KARSQ15046 597 aaKnown RBP7.79□□□□□ -1.16
SORT1-209ENST00000538502 AP1ARQ63HQ0 302 aa7.79□□□□□ -1.16
SORT1-209ENST00000538502 LZTFL1Q9NQ48 299 aa7.79□□□□□ -1.16
SORT1-209ENST00000538502 FAN1Q9Y2M0 1017 aa7.79□□□□□ -1.16
SORT1-209ENST00000538502 CCDC61Q9Y6R9 512 aa7.79□□□□□ -1.16
SORT1-209ENST00000538502 VIMP08670 466 aaKnown RBP7.79□□□□□ -1.16
SORT1-209ENST00000538502 ESCO1Q5FWF5 840 aa7.79□□□□□ -1.16
SORT1-209ENST00000538502 CCDC62Q6P9F0 684 aa7.79□□□□□ -1.16
SORT1-209ENST00000538502 CAPZA3Q96KX2 299 aa7.79□□□□□ -1.16
SORT1-209ENST00000538502 USP26Q9BXU7 913 aa7.79□□□□□ -1.16
SORT1-209ENST00000538502 KCNK9Q9NPC2 374 aa7.79□□□□□ -1.16
SORT1-209ENST00000538502 NUTM2GQ5VZR2 741 aa7.79□□□□□ -1.16
SORT1-209ENST00000538502 CCDC97Q96F63 343 aaPredicted RBP7.79□□□□□ -1.16
SORT1-209ENST00000538502 FAM114A2Q9NRY5 505 aa7.79□□□□□ -1.16
SORT1-209ENST00000538502 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.79□□□□□ -1.16
SORT1-209ENST00000538502 LMOD1P29536 600 aaPredicted RBP7.79□□□□□ -1.16
SORT1-209ENST00000538502 PPP1R7Q15435 360 aa7.79□□□□□ -1.16
SORT1-209ENST00000538502 BRF1Q92994 677 aa7.79□□□□□ -1.16
SORT1-209ENST00000538502 TEX13AQ9BXU3 409 aaPredicted RBP7.79□□□□□ -1.16
SORT1-209ENST00000538502 ITSN2Q9NZM3 1697 aa7.79□□□□□ -1.16
SORT1-209ENST00000538502 GMNNO75496 209 aa7.78□□□□□ -1.16
SORT1-209ENST00000538502 ELF2Q15723 593 aa7.78□□□□□ -1.16
SORT1-209ENST00000538502 CFAP157Q5JU67 520 aa7.78□□□□□ -1.16
SORT1-209ENST00000538502 ISM2Q6H9L7 571 aa7.78□□□□□ -1.16
SORT1-209ENST00000538502 RPUSD2Q8IZ73 545 aaKnown RBP7.78□□□□□ -1.16
SORT1-209ENST00000538502 MRPL50Q8N5N7 158 aaKnown RBP7.78□□□□□ -1.16
SORT1-209ENST00000538502 FAM71BQ8TC56 605 aa7.78□□□□□ -1.16
SORT1-209ENST00000538502 DCTPP1Q9H773 170 aa7.78□□□□□ -1.16
SORT1-209ENST00000538502 EFCAB8A8MWE9 144 aa7.78□□□□□ -1.16
SORT1-209ENST00000538502 NLRP12P59046 1061 aa7.78□□□□□ -1.16
SORT1-209ENST00000538502 PPP1R42Q7Z4L9 355 aa7.78□□□□□ -1.16
SORT1-209ENST00000538502 ESR2Q92731 530 aa7.78□□□□□ -1.16
SORT1-209ENST00000538502 CABS1Q96KC9 395 aa7.78□□□□□ -1.16
SORT1-209ENST00000538502 NUCKS1Q9H1E3 243 aaKnown RBP7.78□□□□□ -1.16
SORT1-209ENST00000538502 THEGQ9P2T0 379 aa7.78□□□□□ -1.16
SORT1-209ENST00000538502 IFT140Q96RY7 1462 aa7.78□□□□□ -1.16
SORT1-209ENST00000538502 ABCC5O15440 1437 aa7.78□□□□□ -1.16
SORT1-209ENST00000538502 WDHD1O75717 1129 aaPredicted RBP7.78□□□□□ -1.16
SORT1-209ENST00000538502 ZBTB17Q13105 803 aa7.78□□□□□ -1.16
SORT1-209ENST00000538502 PPP2R5EQ16537 467 aa7.78□□□□□ -1.16
SORT1-209ENST00000538502 SYCE1Q8N0S2 351 aa7.78□□□□□ -1.16
SORT1-209ENST00000538502 MLKLQ8NB16 471 aa7.78□□□□□ -1.16
SORT1-209ENST00000538502 BICD1Q96G01 975 aa7.78□□□□□ -1.16
SORT1-209ENST00000538502 RNF216Q9NWF9 866 aaPredicted RBP7.78□□□□□ -1.16
SORT1-209ENST00000538502 CDC25BP30305 580 aa7.78□□□□□ -1.16
SORT1-209ENST00000538502 AFMP43652 599 aa7.78□□□□□ -1.16
SORT1-209ENST00000538502 MCM10Q7L590 875 aa7.78□□□□□ -1.16
SORT1-209ENST00000538502 HOMEZQ8IX15 550 aa7.78□□□□□ -1.16
SORT1-209ENST00000538502 AFAP1L2Q8N4X5 818 aa7.78□□□□□ -1.16
SORT1-209ENST00000538502 IQUBQ8NA54 791 aa7.78□□□□□ -1.16
SORT1-209ENST00000538502 MMRN2Q9H8L6 949 aa7.78□□□□□ -1.16
SORT1-209ENST00000538502 SNAPC4Q5SXM2 1469 aa7.78□□□□□ -1.16
SORT1-209ENST00000538502 IQGAP2Q13576 1575 aa7.78□□□□□ -1.16
SORT1-209ENST00000538502 BAG3O95817 575 aa7.78□□□□□ -1.16
SORT1-209ENST00000538502 AK2P54819 239 aa7.78□□□□□ -1.16
SORT1-209ENST00000538502 RRS1Q15050 365 aaKnown RBP7.78□□□□□ -1.16
SORT1-209ENST00000538502 MAIP1Q8WWC4 291 aa7.78□□□□□ -1.16
SORT1-209ENST00000538502 NUDT16Q96DE0 195 aaKnown RBP7.78□□□□□ -1.16
SORT1-209ENST00000538502 NOX5Q96PH1 765 aa7.78□□□□□ -1.16
SORT1-209ENST00000538502 GBP5Q96PP8 586 aa7.78□□□□□ -1.16
SORT1-209ENST00000538502 MBIPQ9NS73 344 aa7.78□□□□□ -1.16
SORT1-209ENST00000538502 EFCAB13Q8IY85 973 aa7.77□□□□□ -1.16
SORT1-209ENST00000538502 CCDC63Q8NA47 563 aa7.77□□□□□ -1.16
SORT1-209ENST00000538502 ABCF2Q9UG63 623 aa7.77□□□□□ -1.16
SORT1-209ENST00000538502 DNMBPQ6XZF7 1577 aa7.77□□□□□ -1.17
SORT1-209ENST00000538502 MICU3Q86XE3 530 aa7.77□□□□□ -1.17
SORT1-209ENST00000538502 NECAB1Q8N987 351 aa7.77□□□□□ -1.17
SORT1-209ENST00000538502 PCDHB15Q9Y5E8 787 aa7.77□□□□□ -1.17
SORT1-209ENST00000538502 COMMD10Q9Y6G5 202 aa7.77□□□□□ -1.17
SORT1-209ENST00000538502 ASIC1P78348 528 aa7.77□□□□□ -1.17
SORT1-209ENST00000538502 ZSCAN29Q8IWY8 852 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms