RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 IGF2BP3O00425 579 aaKnown RBP eCLIP17.9■□□□□ 0.46
SMARCA4-206ENST00000538456 TAF5LO75529 589 aa17.9■□□□□ 0.46
SMARCA4-206ENST00000538456 WNK4Q96J92 1243 aa17.9■□□□□ 0.46
SMARCA4-206ENST00000538456 MYH16Q9H6N6 1097 aa17.9■□□□□ 0.46
SMARCA4-206ENST00000538456 JAG2Q9Y219 1238 aa17.9■□□□□ 0.46
SMARCA4-206ENST00000538456 OTOFQ9HC10 1997 aa17.9■□□□□ 0.46
SMARCA4-206ENST00000538456 ANKRD18BA2A2Z9 1011 aa17.89■□□□□ 0.45
SMARCA4-206ENST00000538456 PPP1R12BO60237 982 aaPredicted RBP17.89■□□□□ 0.45
SMARCA4-206ENST00000538456 CSF1RP07333 972 aa17.89■□□□□ 0.45
SMARCA4-206ENST00000538456 ZBTB48P10074 688 aaPredicted RBP17.89■□□□□ 0.45
SMARCA4-206ENST00000538456 CASP7P55210 303 aa17.89■□□□□ 0.45
SMARCA4-206ENST00000538456 FLIIQ13045 1269 aa17.89■□□□□ 0.45
SMARCA4-206ENST00000538456 FKBP5Q13451 457 aaPredicted RBP17.89■□□□□ 0.45
SMARCA4-206ENST00000538456 CFAP100Q494V2 611 aa17.89■□□□□ 0.45
SMARCA4-206ENST00000538456 OTOP1Q7RTM1 612 aa17.89■□□□□ 0.45
SMARCA4-206ENST00000538456 VEZTQ9HBM0 779 aa17.89■□□□□ 0.45
SMARCA4-206ENST00000538456 CHMP3Q9Y3E7 222 aa17.89■□□□□ 0.45
SMARCA4-206ENST00000538456 KIAA0100Q14667 2235 aaKnown RBP17.88■□□□□ 0.45
SMARCA4-206ENST00000538456 MYO1BO43795 1136 aa17.88■□□□□ 0.45
SMARCA4-206ENST00000538456 INHBEP58166 350 aa17.88■□□□□ 0.45
SMARCA4-206ENST00000538456 MAP3K11Q16584 847 aa17.88■□□□□ 0.45
SMARCA4-206ENST00000538456 DNAAF4Q8WXU2 420 aa17.88■□□□□ 0.45
SMARCA4-206ENST00000538456 PPP2R3BQ9Y5P8 575 aa17.88■□□□□ 0.45
SMARCA4-206ENST00000538456 AOX1Q06278 1338 aa17.88■□□□□ 0.45
SMARCA4-206ENST00000538456 IRS2Q9Y4H2 1338 aa17.88■□□□□ 0.45
SMARCA4-206ENST00000538456 CACNA1FO60840 1977 aa17.88■□□□□ 0.45
SMARCA4-206ENST00000538456 RBBP6Q7Z6E9 1792 aaKnown RBP17.87■□□□□ 0.45
SMARCA4-206ENST00000538456 POTEFA5A3E0 1075 aa17.87■□□□□ 0.45
SMARCA4-206ENST00000538456 SPDYE2BA6NHP3 402 aa17.87■□□□□ 0.45
SMARCA4-206ENST00000538456 SPDYE6P0CI01 402 aa17.87■□□□□ 0.45
SMARCA4-206ENST00000538456 NBPF12Q5TAG4 269 aaPredicted RBP17.87■□□□□ 0.45
SMARCA4-206ENST00000538456 ZNF804AQ7Z570 1209 aa17.87■□□□□ 0.45
SMARCA4-206ENST00000538456 MTMR14Q8NCE2 650 aa17.87■□□□□ 0.45
SMARCA4-206ENST00000538456 LINS1Q8NG48 757 aa17.87■□□□□ 0.45
SMARCA4-206ENST00000538456 RBM5P52756 815 aaKnown RBP eCLIP17.86■□□□□ 0.45
SMARCA4-206ENST00000538456 CRHR2Q13324 411 aa17.86■□□□□ 0.45
SMARCA4-206ENST00000538456 IFIT5Q13325 482 aaKnown RBP17.86■□□□□ 0.45
SMARCA4-206ENST00000538456 SUPT20HL1Q3ZLR7 823 aa17.86■□□□□ 0.45
SMARCA4-206ENST00000538456 CD99L2Q8TCZ2 262 aa17.86■□□□□ 0.45
SMARCA4-206ENST00000538456 PRMT6Q96LA8 375 aaPredicted RBP17.86■□□□□ 0.45
SMARCA4-206ENST00000538456 GJA5P36382 358 aa17.85■□□□□ 0.45
SMARCA4-206ENST00000538456 IREB2P48200 963 aaKnown RBP17.85■□□□□ 0.45
SMARCA4-206ENST00000538456 WWC1Q8IX03 1113 aa17.85■□□□□ 0.45
SMARCA4-206ENST00000538456 ERO1AQ96HE7 468 aa17.85■□□□□ 0.45
SMARCA4-206ENST00000538456 PLIN1O60240 522 aa17.84■□□□□ 0.45
SMARCA4-206ENST00000538456 IL1R1P14778 569 aa17.84■□□□□ 0.45
SMARCA4-206ENST00000538456 RASA3Q14644 834 aa17.84■□□□□ 0.45
SMARCA4-206ENST00000538456 INTS3Q68E01 1043 aaKnown RBP17.84■□□□□ 0.45
SMARCA4-206ENST00000538456 C15orf52Q6ZUT6 534 aaKnown RBP17.84■□□□□ 0.45
SMARCA4-206ENST00000538456 GCC1Q96CN9 775 aa17.84■□□□□ 0.45
SMARCA4-206ENST00000538456 USP2O75604 605 aaPredicted RBP17.83■□□□□ 0.44
SMARCA4-206ENST00000538456 FOXO4P98177 505 aa17.83■□□□□ 0.44
SMARCA4-206ENST00000538456 OTUD7BQ6GQQ9 843 aa17.83■□□□□ 0.44
SMARCA4-206ENST00000538456 PTPN22Q9Y2R2 807 aa17.83■□□□□ 0.44
SMARCA4-206ENST00000538456 ARAP2Q8WZ64 1704 aa17.82■□□□□ 0.44
SMARCA4-206ENST00000538456 F6X3S4 739 aa17.82■□□□□ 0.44
SMARCA4-206ENST00000538456 FKBP1AP62942 108 aaKnown RBP17.82■□□□□ 0.44
SMARCA4-206ENST00000538456 CCDC27Q2M243 656 aa17.82■□□□□ 0.44
SMARCA4-206ENST00000538456 TAF7LQ5H9L4 462 aa17.82■□□□□ 0.44
SMARCA4-206ENST00000538456 ANKRD13AQ8IZ07 590 aa17.82■□□□□ 0.44
SMARCA4-206ENST00000538456 ZNF594Q96JF6 807 aaPredicted RBP17.82■□□□□ 0.44
SMARCA4-206ENST00000538456 PTPN18Q99952 460 aa17.82■□□□□ 0.44
SMARCA4-206ENST00000538456 ELP3Q9H9T3 547 aa17.82■□□□□ 0.44
SMARCA4-206ENST00000538456 EFCC1Q9HA90 598 aa17.82■□□□□ 0.44
SMARCA4-206ENST00000538456 FANCIQ9NVI1 1328 aa17.81■□□□□ 0.44
SMARCA4-206ENST00000538456 UNCXA6NJT0 531 aa17.81■□□□□ 0.44
SMARCA4-206ENST00000538456 CAP1Q01518 475 aa17.81■□□□□ 0.44
SMARCA4-206ENST00000538456 CCDC184Q52MB2 194 aa17.81■□□□□ 0.44
SMARCA4-206ENST00000538456 LMBR1LQ6UX01 489 aa17.81■□□□□ 0.44
SMARCA4-206ENST00000538456 OPTNQ96CV9 577 aa17.81■□□□□ 0.44
SMARCA4-206ENST00000538456 SP3Q02447 781 aa17.8■□□□□ 0.44
SMARCA4-206ENST00000538456 CCDC57Q2TAC2 916 aa17.8■□□□□ 0.44
SMARCA4-206ENST00000538456 HABP4Q5JVS0 413 aaKnown RBP17.8■□□□□ 0.44
SMARCA4-206ENST00000538456 EPHA10Q5JZY3 1008 aa17.8■□□□□ 0.44
SMARCA4-206ENST00000538456 MFSD14BQ5SR56 506 aa17.8■□□□□ 0.44
SMARCA4-206ENST00000538456 LDHAL6AQ6ZMR3 332 aa17.8■□□□□ 0.44
SMARCA4-206ENST00000538456 CDAN1Q8IWY9 1227 aa17.8■□□□□ 0.44
SMARCA4-206ENST00000538456 CNNM1Q9NRU3 951 aa17.8■□□□□ 0.44
SMARCA4-206ENST00000538456 IL16Q14005 1332 aa17.79■□□□□ 0.44
SMARCA4-206ENST00000538456 EN2P19622 333 aaPredicted RBP17.79■□□□□ 0.44
SMARCA4-206ENST00000538456 TNFAIP1Q13829 316 aa17.79■□□□□ 0.44
SMARCA4-206ENST00000538456 SPDYE2Q495Y8 402 aa17.79■□□□□ 0.44
SMARCA4-206ENST00000538456 CNKSR2Q8WXI2 1034 aa17.79■□□□□ 0.44
SMARCA4-206ENST00000538456 TDRD3Q9H7E2 651 aaKnown RBP17.79■□□□□ 0.44
SMARCA4-206ENST00000538456 ZNF70Q9UC06 446 aaPredicted RBP17.79■□□□□ 0.44
SMARCA4-206ENST00000538456 TTF2Q9UNY4 1162 aaKnown RBP17.79■□□□□ 0.44
SMARCA4-206ENST00000538456 GYG1P46976 350 aa17.78■□□□□ 0.44
SMARCA4-206ENST00000538456 BEND3Q5T5X7 828 aa17.78■□□□□ 0.44
SMARCA4-206ENST00000538456 ARMC5Q96C12 935 aa17.78■□□□□ 0.44
SMARCA4-206ENST00000538456 FAM205AQ6ZU69 1335 aa17.77■□□□□ 0.44
SMARCA4-206ENST00000538456 TESPA1A2RU30 521 aaPredicted RBP17.77■□□□□ 0.44
SMARCA4-206ENST00000538456 TCP10L2B9ZVM9 353 aa17.77■□□□□ 0.44
SMARCA4-206ENST00000538456 TMEM39BQ9GZU3 492 aa17.77■□□□□ 0.44
SMARCA4-206ENST00000538456 SALL2Q9Y467 1007 aaPredicted RBP17.77■□□□□ 0.44
SMARCA4-206ENST00000538456 ZSWIM8A7E2V4 1837 aa17.77■□□□□ 0.43
SMARCA4-206ENST00000538456 GRM8O00222 908 aa17.76■□□□□ 0.43
SMARCA4-206ENST00000538456 VAMP4O75379 141 aa17.76■□□□□ 0.43
SMARCA4-206ENST00000538456 VGLL4Q14135 290 aa17.76■□□□□ 0.43
SMARCA4-206ENST00000538456 TAF1CQ15572 869 aaPredicted RBP17.76■□□□□ 0.43
SMARCA4-206ENST00000538456 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms