RNA–Protein interactions for RNA: ENST00000538439.1

NPIPB3-209, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-209ENST00000538439 NLGN1Q8N2Q7 840 aa12.49□□□□□ -0.41
NPIPB3-209ENST00000538439 SSH3Q8TE77 659 aa12.49□□□□□ -0.41
NPIPB3-209ENST00000538439 PLA2G12BQ9BX93 195 aa12.49□□□□□ -0.41
NPIPB3-209ENST00000538439 SCN7AQ01118 1682 aa12.48□□□□□ -0.41
NPIPB3-209ENST00000538439 NPHP1O15259 732 aa12.48□□□□□ -0.41
NPIPB3-209ENST00000538439 PDE8AO60658 829 aa12.48□□□□□ -0.41
NPIPB3-209ENST00000538439 AP1G2O75843 785 aa12.48□□□□□ -0.41
NPIPB3-209ENST00000538439 NTSR2O95665 410 aa12.48□□□□□ -0.41
NPIPB3-209ENST00000538439 RABL6Q3YEC7 729 aaPredicted RBP12.48□□□□□ -0.41
NPIPB3-209ENST00000538439 HSP90AB4PQ58FF6 505 aa12.48□□□□□ -0.41
NPIPB3-209ENST00000538439 TPTE2Q6XPS3 522 aa12.48□□□□□ -0.41
NPIPB3-209ENST00000538439 NBPF5PQ86XG9 351 aaPredicted RBP12.48□□□□□ -0.41
NPIPB3-209ENST00000538439 SMC5Q8IY18 1101 aa12.48□□□□□ -0.41
NPIPB3-209ENST00000538439 KAZALD1Q96I82 304 aa12.48□□□□□ -0.41
NPIPB3-209ENST00000538439 DCTPP1Q9H773 170 aa12.48□□□□□ -0.41
NPIPB3-209ENST00000538439 PNPLA7Q6ZV29 1317 aa12.47□□□□□ -0.41
NPIPB3-209ENST00000538439 FDX1P10109 184 aa12.47□□□□□ -0.41
NPIPB3-209ENST00000538439 PBX2P40425 430 aa12.47□□□□□ -0.41
NPIPB3-209ENST00000538439 FOXO4P98177 505 aa12.47□□□□□ -0.41
NPIPB3-209ENST00000538439 NFIXQ14938 502 aa12.47□□□□□ -0.41
NPIPB3-209ENST00000538439 EPHA10Q5JZY3 1008 aa12.47□□□□□ -0.41
NPIPB3-209ENST00000538439 LMBR1LQ6UX01 489 aa12.47□□□□□ -0.41
NPIPB3-209ENST00000538439 CCDC97Q96F63 343 aaPredicted RBP12.47□□□□□ -0.41
NPIPB3-209ENST00000538439 CHMP3Q9Y3E7 222 aa12.47□□□□□ -0.41
NPIPB3-209ENST00000538439 CARMIL3Q8ND23 1372 aa12.46□□□□□ -0.41
NPIPB3-209ENST00000538439 C4AP0C0L4 1744 aa12.46□□□□□ -0.41
NPIPB3-209ENST00000538439 SURF6O75683 361 aaKnown RBP12.46□□□□□ -0.41
NPIPB3-209ENST00000538439 VARS2Q5ST30 1063 aaKnown RBP12.46□□□□□ -0.41
NPIPB3-209ENST00000538439 OTUD5Q96G74 571 aa12.46□□□□□ -0.41
NPIPB3-209ENST00000538439 SEPT9Q9UHD8 586 aaPredicted RBP12.46□□□□□ -0.41
NPIPB3-209ENST00000538439 SERPINA10Q9UK55 444 aa12.46□□□□□ -0.41
NPIPB3-209ENST00000538439 RAB11FIP3O75154 756 aa12.45□□□□□ -0.42
NPIPB3-209ENST00000538439 CSF1RP07333 972 aa12.45□□□□□ -0.42
NPIPB3-209ENST00000538439 SLC10A3P09131 477 aa12.45□□□□□ -0.42
NPIPB3-209ENST00000538439 TM4SF1P30408 202 aa12.45□□□□□ -0.42
NPIPB3-209ENST00000538439 CTSWP56202 376 aa12.45□□□□□ -0.42
NPIPB3-209ENST00000538439 CCDC57Q2TAC2 916 aa12.45□□□□□ -0.42
NPIPB3-209ENST00000538439 ANKRD45Q5TZF3 282 aa12.45□□□□□ -0.42
NPIPB3-209ENST00000538439 SYNE4Q8N205 404 aa12.45□□□□□ -0.42
NPIPB3-209ENST00000538439 PDZRN3Q9UPQ7 1066 aa12.45□□□□□ -0.42
NPIPB3-209ENST00000538439 COL24A1Q17RW2 1714 aa12.45□□□□□ -0.42
NPIPB3-209ENST00000538439 SERPINB2P05120 415 aa12.44□□□□□ -0.42
NPIPB3-209ENST00000538439 USP17L8P0C7I0 530 aa12.44□□□□□ -0.42
NPIPB3-209ENST00000538439 HCLS1P14317 486 aaPredicted RBP12.44□□□□□ -0.42
NPIPB3-209ENST00000538439 G3BP1Q13283 466 aaKnown RBP eCLIP12.44□□□□□ -0.42
NPIPB3-209ENST00000538439 OS9Q13438 667 aaPredicted RBP12.44□□□□□ -0.42
NPIPB3-209ENST00000538439 ERFEQ4G0M1 354 aa12.44□□□□□ -0.42
NPIPB3-209ENST00000538439 SLC10A5Q5PT55 438 aa12.44□□□□□ -0.42
NPIPB3-209ENST00000538439 SLF2Q8IX21 1173 aa12.44□□□□□ -0.42
NPIPB3-209ENST00000538439 EXOC6BQ9Y2D4 811 aa12.44□□□□□ -0.42
NPIPB3-209ENST00000538439 NOP58Q9Y2X3 529 aaKnown RBP12.44□□□□□ -0.42
NPIPB3-209ENST00000538439 ANKRD18BA2A2Z9 1011 aa12.43□□□□□ -0.42
NPIPB3-209ENST00000538439 ST5P78524 1137 aa12.43□□□□□ -0.42
NPIPB3-209ENST00000538439 NUCB1Q02818 461 aa12.43□□□□□ -0.42
NPIPB3-209ENST00000538439 IFIT5Q13325 482 aaKnown RBP12.43□□□□□ -0.42
NPIPB3-209ENST00000538439 CCDC152Q4G0S7 254 aa12.43□□□□□ -0.42
NPIPB3-209ENST00000538439 GRIPAP1Q4V328 841 aa12.43□□□□□ -0.42
NPIPB3-209ENST00000538439 TAF7LQ5H9L4 462 aa12.43□□□□□ -0.42
NPIPB3-209ENST00000538439 CHD1LQ86WJ1 897 aa12.43□□□□□ -0.42
NPIPB3-209ENST00000538439 ERC1Q8IUD2 1116 aa12.43□□□□□ -0.42
NPIPB3-209ENST00000538439 CNBD1Q8NA66 436 aa12.43□□□□□ -0.42
NPIPB3-209ENST00000538439 TTLL11Q8NHH1 800 aa12.43□□□□□ -0.42
NPIPB3-209ENST00000538439 NLRP3Q96P20 1036 aa12.43□□□□□ -0.42
NPIPB3-209ENST00000538439 MTFR1LQ9H019 292 aa12.43□□□□□ -0.42
NPIPB3-209ENST00000538439 GDPD2Q9HCC8 539 aa12.43□□□□□ -0.42
NPIPB3-209ENST00000538439 COPRSQ9NQ92 184 aa12.43□□□□□ -0.42
NPIPB3-209ENST00000538439 PARP3Q9Y6F1 533 aa12.43□□□□□ -0.42
NPIPB3-209ENST00000538439 RFX5P48382 616 aaPredicted RBP12.42□□□□□ -0.42
NPIPB3-209ENST00000538439 SLC16A10Q8TF71 515 aa12.42□□□□□ -0.42
NPIPB3-209ENST00000538439 KIF1BPQ96EK5 621 aa12.42□□□□□ -0.42
NPIPB3-209ENST00000538439 LRRCC1Q9C099 1032 aa12.42□□□□□ -0.42
NPIPB3-209ENST00000538439 POLRMTO00411 1230 aaKnown RBP12.41□□□□□ -0.42
NPIPB3-209ENST00000538439 ITGA6P23229 1130 aa12.41□□□□□ -0.42
NPIPB3-209ENST00000538439 PTPN12Q05209 780 aaKnown RBP12.41□□□□□ -0.42
NPIPB3-209ENST00000538439 SF3B3Q15393 1217 aaKnown RBP12.41□□□□□ -0.42
NPIPB3-209ENST00000538439 DMRTA1Q5VZB9 504 aa12.41□□□□□ -0.42
NPIPB3-209ENST00000538439 LAPTM4BQ86VI4 370 aa12.41□□□□□ -0.42
NPIPB3-209ENST00000538439 CCDC85AQ96PX6 553 aaPredicted RBP12.41□□□□□ -0.42
NPIPB3-209ENST00000538439 LNPKQ9C0E8 428 aa12.41□□□□□ -0.42
NPIPB3-209ENST00000538439 NBPF3Q9H094 633 aa12.41□□□□□ -0.42
NPIPB3-209ENST00000538439 PLSCR2Q9NRY7 297 aa12.41□□□□□ -0.42
NPIPB3-209ENST00000538439 PA2G4Q9UQ80 394 aaKnown RBP12.41□□□□□ -0.42
NPIPB3-209ENST00000538439 TUBGCP6Q96RT7 1819 aa12.4□□□□□ -0.42
NPIPB3-209ENST00000538439 MMP10P09238 476 aa12.4□□□□□ -0.42
NPIPB3-209ENST00000538439 DDR1Q08345 913 aa12.4□□□□□ -0.42
NPIPB3-209ENST00000538439 MSL1Q68DK7 614 aa12.4□□□□□ -0.42
NPIPB3-209ENST00000538439 PRR5LQ6MZQ0 368 aa12.4□□□□□ -0.42
NPIPB3-209ENST00000538439 POTEEQ6S8J3 1075 aa12.4□□□□□ -0.42
NPIPB3-209ENST00000538439 RHPN1Q8TCX5 695 aa12.4□□□□□ -0.42
NPIPB3-209ENST00000538439 SIL1Q9H173 461 aa12.4□□□□□ -0.42
NPIPB3-209ENST00000538439 GREM2Q9H772 168 aa12.4□□□□□ -0.42
NPIPB3-209ENST00000538439 VPS9D1Q9Y2B5 631 aa12.4□□□□□ -0.42
NPIPB3-209ENST00000538439 QSER1Q2KHR3 1735 aa12.4□□□□□ -0.43
NPIPB3-209ENST00000538439 EYA2O00167 538 aa12.39□□□□□ -0.43
NPIPB3-209ENST00000538439 CIAO1O76071 339 aa12.39□□□□□ -0.43
NPIPB3-209ENST00000538439 ABL2P42684 1182 aa12.39□□□□□ -0.43
NPIPB3-209ENST00000538439 RGS3P49796 1198 aa12.39□□□□□ -0.43
NPIPB3-209ENST00000538439 MTMR2Q13614 643 aa12.39□□□□□ -0.43
NPIPB3-209ENST00000538439 CLASRPQ8N2M8 674 aaKnown RBP12.39□□□□□ -0.43
NPIPB3-209ENST00000538439 KLHDC4Q8TBB5 520 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms