RNA–Protein interactions for RNA: ENST00000538036.1

VPS37C-204, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 506 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-204ENST00000538036 IGF2BP3O00425 579 aaKnown RBP eCLIP13.06□□□□□ -0.32
VPS37C-204ENST00000538036 SPDYE6P0CI01 402 aa13.06□□□□□ -0.32
VPS37C-204ENST00000538036 IL1R1P14778 569 aa13.06□□□□□ -0.32
VPS37C-204ENST00000538036 CASP7P55210 303 aa13.06□□□□□ -0.32
VPS37C-204ENST00000538036 ZNF804AQ7Z570 1209 aa13.06□□□□□ -0.32
VPS37C-204ENST00000538036 LINS1Q8NG48 757 aa13.06□□□□□ -0.32
VPS37C-204ENST00000538036 PTPN22Q9Y2R2 807 aa13.06□□□□□ -0.32
VPS37C-204ENST00000538036 TESPA1A2RU30 521 aaPredicted RBP13.05□□□□□ -0.32
VPS37C-204ENST00000538036 ARHGEF6Q15052 776 aa13.05□□□□□ -0.32
VPS37C-204ENST00000538036 CCDC27Q2M243 656 aa13.05□□□□□ -0.32
VPS37C-204ENST00000538036 TWISTNBQ3B726 338 aaPredicted RBP13.05□□□□□ -0.32
VPS37C-204ENST00000538036 CFAP100Q494V2 611 aa13.05□□□□□ -0.32
VPS37C-204ENST00000538036 HABP4Q5JVS0 413 aaKnown RBP13.05□□□□□ -0.32
VPS37C-204ENST00000538036 ANKRD13AQ8IZ07 590 aa13.05□□□□□ -0.32
VPS37C-204ENST00000538036 CERS5Q8N5B7 392 aa13.05□□□□□ -0.32
VPS37C-204ENST00000538036 ARMC5Q96C12 935 aa13.05□□□□□ -0.32
VPS37C-204ENST00000538036 CLMNQ96JQ2 1002 aa13.05□□□□□ -0.32
VPS37C-204ENST00000538036 IRS2Q9Y4H2 1338 aa13.05□□□□□ -0.32
VPS37C-204ENST00000538036 USP2O75604 605 aaPredicted RBP13.04□□□□□ -0.32
VPS37C-204ENST00000538036 SP3Q02447 781 aa13.04□□□□□ -0.32
VPS37C-204ENST00000538036 FLIIQ13045 1269 aa13.04□□□□□ -0.32
VPS37C-204ENST00000538036 CRHR2Q13324 411 aa13.04□□□□□ -0.32
VPS37C-204ENST00000538036 IFIT5Q13325 482 aaKnown RBP13.04□□□□□ -0.32
VPS37C-204ENST00000538036 TNFAIP1Q13829 316 aa13.04□□□□□ -0.32
VPS37C-204ENST00000538036 G2E3Q7L622 706 aa13.04□□□□□ -0.32
VPS37C-204ENST00000538036 DNAAF4Q8WXU2 420 aa13.04□□□□□ -0.32
VPS37C-204ENST00000538036 PRMT6Q96LA8 375 aaPredicted RBP13.04□□□□□ -0.32
VPS37C-204ENST00000538036 EFCC1Q9HA90 598 aa13.04□□□□□ -0.32
VPS37C-204ENST00000538036 FZD1Q9UP38 647 aa13.04□□□□□ -0.32
VPS37C-204ENST00000538036 ZNF646O15015 1829 aaPredicted RBP13.04□□□□□ -0.32
VPS37C-204ENST00000538036 MYH3P11055 1940 aa13.03□□□□□ -0.32
VPS37C-204ENST00000538036 POTEFA5A3E0 1075 aa13.03□□□□□ -0.32
VPS37C-204ENST00000538036 FKBP5Q13451 457 aaPredicted RBP13.03□□□□□ -0.32
VPS37C-204ENST00000538036 RASA3Q14644 834 aa13.03□□□□□ -0.32
VPS37C-204ENST00000538036 NBPF12Q5TAG4 269 aaPredicted RBP13.03□□□□□ -0.32
VPS37C-204ENST00000538036 TSR2Q969E8 191 aaKnown RBP13.03□□□□□ -0.32
VPS37C-204ENST00000538036 CLRN2A0PK11 232 aa13.02□□□□□ -0.33
VPS37C-204ENST00000538036 F8W031 263 aaPredicted RBP13.02□□□□□ -0.33
VPS37C-204ENST00000538036 TAF5LO75529 589 aa13.02□□□□□ -0.33
VPS37C-204ENST00000538036 NCBP3Q53F19 620 aaKnown RBP13.02□□□□□ -0.33
VPS37C-204ENST00000538036 TMEM106CQ9BVX2 250 aa13.02□□□□□ -0.33
VPS37C-204ENST00000538036 VEZTQ9HBM0 779 aa13.02□□□□□ -0.33
VPS37C-204ENST00000538036 IL16Q14005 1332 aa13.02□□□□□ -0.33
VPS37C-204ENST00000538036 SSC5DA1L4H1 1573 aa13.02□□□□□ -0.33
VPS37C-204ENST00000538036 RBM5P52756 815 aaKnown RBP eCLIP13.01□□□□□ -0.33
VPS37C-204ENST00000538036 NBPF11Q86T75 865 aa13.01□□□□□ -0.33
VPS37C-204ENST00000538036 WWC1Q8IX03 1113 aa13.01□□□□□ -0.33
VPS37C-204ENST00000538036 HELBQ8NG08 1087 aaPredicted RBP13.01□□□□□ -0.33
VPS37C-204ENST00000538036 CD99L2Q8TCZ2 262 aa13.01□□□□□ -0.33
VPS37C-204ENST00000538036 PTPN18Q99952 460 aa13.01□□□□□ -0.33
VPS37C-204ENST00000538036 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.01□□□□□ -0.33
VPS37C-204ENST00000538036 SERPINA10Q9UK55 444 aa13.01□□□□□ -0.33
VPS37C-204ENST00000538036 FAM205AQ6ZU69 1335 aa13.01□□□□□ -0.33
VPS37C-204ENST00000538036 SNAP23O00161 211 aa13□□□□□ -0.33
VPS37C-204ENST00000538036 WDHD1O75717 1129 aaPredicted RBP13□□□□□ -0.33
VPS37C-204ENST00000538036 GJA5P36382 358 aa13□□□□□ -0.33
VPS37C-204ENST00000538036 GTF2A2P52657 109 aa13□□□□□ -0.33
VPS37C-204ENST00000538036 FOXO4P98177 505 aa13□□□□□ -0.33
VPS37C-204ENST00000538036 CCDC57Q2TAC2 916 aa13□□□□□ -0.33
VPS37C-204ENST00000538036 SPDYE2Q495Y8 402 aa13□□□□□ -0.33
VPS37C-204ENST00000538036 MS4A4AQ96JQ5 239 aa13□□□□□ -0.33
VPS37C-204ENST00000538036 PCDHAC2Q9Y5I4 1007 aa13□□□□□ -0.33
VPS37C-204ENST00000538036 KIAA0100Q14667 2235 aaKnown RBP13□□□□□ -0.33
VPS37C-204ENST00000538036 HTTP42858 3142 aa12.99□□□□□ -0.33
VPS37C-204ENST00000538036 EN2P19622 333 aaPredicted RBP12.99□□□□□ -0.33
VPS37C-204ENST00000538036 LDHAL6AQ6ZMR3 332 aa12.99□□□□□ -0.33
VPS37C-204ENST00000538036 TDRD7Q8NHU6 1098 aaKnown RBP12.99□□□□□ -0.33
VPS37C-204ENST00000538036 OPTNQ96CV9 577 aa12.99□□□□□ -0.33
VPS37C-204ENST00000538036 ZNF333Q96JL9 665 aa12.99□□□□□ -0.33
VPS37C-204ENST00000538036 ZFYVE28Q9HCC9 887 aa12.99□□□□□ -0.33
VPS37C-204ENST00000538036 ZNF70Q9UC06 446 aaPredicted RBP12.99□□□□□ -0.33
VPS37C-204ENST00000538036 SPEF2Q9C093 1822 aa12.99□□□□□ -0.33
VPS37C-204ENST00000538036 TNNI2P48788 182 aa12.98□□□□□ -0.33
VPS37C-204ENST00000538036 MAP3K9P80192 1104 aa12.98□□□□□ -0.33
VPS37C-204ENST00000538036 UBE4AQ14139 1066 aa12.98□□□□□ -0.33
VPS37C-204ENST00000538036 TAF7LQ5H9L4 462 aa12.98□□□□□ -0.33
VPS37C-204ENST00000538036 MFSD14BQ5SR56 506 aa12.98□□□□□ -0.33
VPS37C-204ENST00000538036 LMBR1LQ6UX01 489 aa12.98□□□□□ -0.33
VPS37C-204ENST00000538036 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.98□□□□□ -0.33
VPS37C-204ENST00000538036 ELP3Q9H9T3 547 aa12.98□□□□□ -0.33
VPS37C-204ENST00000538036 ZCCHC17Q9NP64 241 aaKnown RBP12.98□□□□□ -0.33
VPS37C-204ENST00000538036 CNNM1Q9NRU3 951 aa12.98□□□□□ -0.33
VPS37C-204ENST00000538036 TTF2Q9UNY4 1162 aaKnown RBP12.98□□□□□ -0.33
VPS37C-204ENST00000538036 CHMP3Q9Y3E7 222 aa12.98□□□□□ -0.33
VPS37C-204ENST00000538036 LAMB1P07942 1786 aa12.97□□□□□ -0.33
VPS37C-204ENST00000538036 GNRH1P01148 92 aa12.97□□□□□ -0.33
VPS37C-204ENST00000538036 HIBADHP31937 336 aaKnown RBP12.97□□□□□ -0.33
VPS37C-204ENST00000538036 TAF1CQ15572 869 aaPredicted RBP12.97□□□□□ -0.33
VPS37C-204ENST00000538036 SLC9C1Q4G0N8 1177 aa12.97□□□□□ -0.33
VPS37C-204ENST00000538036 BEND3Q5T5X7 828 aa12.97□□□□□ -0.33
VPS37C-204ENST00000538036 DZIP1LQ8IYY4 767 aaKnown RBP12.97□□□□□ -0.33
VPS37C-204ENST00000538036 BRI3BPQ8WY22 251 aa12.97□□□□□ -0.33
VPS37C-204ENST00000538036 TEPSINQ96N21 525 aa12.97□□□□□ -0.33
VPS37C-204ENST00000538036 CSADQ9Y600 493 aa12.97□□□□□ -0.33
VPS37C-204ENST00000538036 AOX1Q06278 1338 aa12.96□□□□□ -0.33
VPS37C-204ENST00000538036 CCL15-CCL14A0A0B4J2E2 113 aa12.96□□□□□ -0.33
VPS37C-204ENST00000538036 PLIN1O60240 522 aa12.96□□□□□ -0.33
VPS37C-204ENST00000538036 VAMP4O75379 141 aa12.96□□□□□ -0.33
VPS37C-204ENST00000538036 HDLBPQ00341 1268 aaKnown RBP12.96□□□□□ -0.33
VPS37C-204ENST00000538036 KIF22Q14807 665 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms