RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 COL1A1P02452 1464 aaPredicted RBP10.49□□□□□ -0.73
SPARC-208ENST00000538026 TMEM88BA6NKF7 163 aa10.49□□□□□ -0.73
SPARC-208ENST00000538026 ADM5C9JUS6 153 aa10.49□□□□□ -0.73
SPARC-208ENST00000538026 WNT10BO00744 389 aa10.49□□□□□ -0.73
SPARC-208ENST00000538026 ZNF804AQ7Z570 1209 aa10.49□□□□□ -0.73
SPARC-208ENST00000538026 JMYQ8N9B5 988 aa10.49□□□□□ -0.73
SPARC-208ENST00000538026 FBXW7Q969H0 707 aa10.49□□□□□ -0.73
SPARC-208ENST00000538026 FBXO3Q9UK99 471 aa10.49□□□□□ -0.73
SPARC-208ENST00000538026 IL15P40933 162 aaPredicted RBP10.48□□□□□ -0.73
SPARC-208ENST00000538026 TIMM10P62072 90 aa10.48□□□□□ -0.73
SPARC-208ENST00000538026 FKBP1AP62942 108 aaKnown RBP10.48□□□□□ -0.73
SPARC-208ENST00000538026 ATP8B2P98198 1209 aa10.48□□□□□ -0.73
SPARC-208ENST00000538026 PUM3Q15397 648 aaKnown RBP10.48□□□□□ -0.73
SPARC-208ENST00000538026 ANGEL2Q5VTE6 544 aaKnown RBP10.48□□□□□ -0.73
SPARC-208ENST00000538026 ITPRIPQ8IWB1 547 aa10.48□□□□□ -0.73
SPARC-208ENST00000538026 SIRT2Q8IXJ6 389 aa10.48□□□□□ -0.73
SPARC-208ENST00000538026 SSH3Q8TE77 659 aa10.48□□□□□ -0.73
SPARC-208ENST00000538026 GGA3Q9NZ52 723 aa10.48□□□□□ -0.73
SPARC-208ENST00000538026 MKRN1Q9UHC7 482 aaKnown RBP10.48□□□□□ -0.73
SPARC-208ENST00000538026 CENPFP49454 3210 aa10.47□□□□□ -0.73
SPARC-208ENST00000538026 F8W031 263 aaPredicted RBP10.47□□□□□ -0.73
SPARC-208ENST00000538026 PHKA1P46020 1223 aa10.47□□□□□ -0.73
SPARC-208ENST00000538026 VEGFBP49765 207 aa10.47□□□□□ -0.73
SPARC-208ENST00000538026 TFCP2Q12800 502 aa10.47□□□□□ -0.73
SPARC-208ENST00000538026 PRAMEF18Q5VWM3 479 aa10.47□□□□□ -0.73
SPARC-208ENST00000538026 CDC37L1Q7L3B6 337 aa10.47□□□□□ -0.73
SPARC-208ENST00000538026 KRT26Q7Z3Y9 468 aa10.47□□□□□ -0.73
SPARC-208ENST00000538026 FTSJ3Q8IY81 847 aaKnown RBP10.47□□□□□ -0.73
SPARC-208ENST00000538026 LPIN2Q92539 896 aa10.47□□□□□ -0.73
SPARC-208ENST00000538026 PRMT6Q96LA8 375 aaPredicted RBP10.47□□□□□ -0.73
SPARC-208ENST00000538026 CEP126Q9P2H0 1117 aa10.47□□□□□ -0.73
SPARC-208ENST00000538026 COG6Q9Y2V7 657 aa10.47□□□□□ -0.73
SPARC-208ENST00000538026 CNTNAP1P78357 1384 aa10.47□□□□□ -0.73
SPARC-208ENST00000538026 ARAP2Q8WZ64 1704 aa10.47□□□□□ -0.73
SPARC-208ENST00000538026 MYH13Q9UKX3 1938 aa10.46□□□□□ -0.73
SPARC-208ENST00000538026 RASSF10A6NK89 507 aa10.46□□□□□ -0.73
SPARC-208ENST00000538026 CELF2O95319 508 aaKnown RBP10.46□□□□□ -0.73
SPARC-208ENST00000538026 ATP2B3Q16720 1220 aa10.46□□□□□ -0.73
SPARC-208ENST00000538026 CEP85Q6P2H3 762 aa10.46□□□□□ -0.73
SPARC-208ENST00000538026 MTMR14Q8NCE2 650 aa10.46□□□□□ -0.73
SPARC-208ENST00000538026 ZBTB40Q9NUA8 1239 aa10.46□□□□□ -0.73
SPARC-208ENST00000538026 MYO3BQ8WXR4 1341 aa10.46□□□□□ -0.73
SPARC-208ENST00000538026 ECM29Q5VYK3 1845 aa10.46□□□□□ -0.74
SPARC-208ENST00000538026 AKAP11Q9UKA4 1901 aa10.45□□□□□ -0.74
SPARC-208ENST00000538026 IFIT1P09914 478 aaKnown RBP10.45□□□□□ -0.74
SPARC-208ENST00000538026 CHAF1AQ13111 956 aaPredicted RBP10.45□□□□□ -0.74
SPARC-208ENST00000538026 MVPQ14764 893 aaKnown RBP10.45□□□□□ -0.74
SPARC-208ENST00000538026 CFAP100Q494V2 611 aa10.45□□□□□ -0.74
SPARC-208ENST00000538026 MFSD14BQ5SR56 506 aa10.45□□□□□ -0.74
SPARC-208ENST00000538026 SAPCD2Q86UD0 394 aa10.45□□□□□ -0.74
SPARC-208ENST00000538026 CDCA5Q96FF9 252 aa10.45□□□□□ -0.74
SPARC-208ENST00000538026 HDAC5Q9UQL6 1122 aa10.45□□□□□ -0.74
SPARC-208ENST00000538026 NOP58Q9Y2X3 529 aaKnown RBP10.45□□□□□ -0.74
SPARC-208ENST00000538026 TLL2Q9Y6L7 1015 aa10.45□□□□□ -0.74
SPARC-208ENST00000538026 PITPNM2Q9BZ72 1349 aa10.44□□□□□ -0.74
SPARC-208ENST00000538026 A0A1B0GUL7 405 aa10.44□□□□□ -0.74
SPARC-208ENST00000538026 SPDYE2BA6NHP3 402 aa10.44□□□□□ -0.74
SPARC-208ENST00000538026 ZBTB22O15209 634 aa10.44□□□□□ -0.74
SPARC-208ENST00000538026 SPDYE6P0CI01 402 aa10.44□□□□□ -0.74
SPARC-208ENST00000538026 SLC5A1P13866 664 aa10.44□□□□□ -0.74
SPARC-208ENST00000538026 CCDC102BQ68D86 513 aa10.44□□□□□ -0.74
SPARC-208ENST00000538026 MOB2Q70IA6 237 aa10.44□□□□□ -0.74
SPARC-208ENST00000538026 OGFOD1Q8N543 542 aa10.44□□□□□ -0.74
SPARC-208ENST00000538026 DCPSQ96C86 337 aaKnown RBP10.44□□□□□ -0.74
SPARC-208ENST00000538026 XAGE2Q96GT9 111 aa10.44□□□□□ -0.74
SPARC-208ENST00000538026 YTHDC1Q96MU7 727 aaKnown RBP10.44□□□□□ -0.74
SPARC-208ENST00000538026 ZIC5Q96T25 663 aa10.44□□□□□ -0.74
SPARC-208ENST00000538026 TTF2Q9UNY4 1162 aaKnown RBP10.44□□□□□ -0.74
SPARC-208ENST00000538026 MYO5AQ9Y4I1 1855 aaKnown RBP10.44□□□□□ -0.74
SPARC-208ENST00000538026 HTTP42858 3142 aa10.44□□□□□ -0.74
SPARC-208ENST00000538026 MMP14P50281 582 aa10.43□□□□□ -0.74
SPARC-208ENST00000538026 DEFB115Q30KQ5 88 aa10.43□□□□□ -0.74
SPARC-208ENST00000538026 CAVIN4Q5BKX8 364 aa10.43□□□□□ -0.74
SPARC-208ENST00000538026 CYP4F22Q6NT55 531 aa10.43□□□□□ -0.74
SPARC-208ENST00000538026 CDAN1Q8IWY9 1227 aa10.43□□□□□ -0.74
SPARC-208ENST00000538026 ZNF384Q8TF68 577 aa10.43□□□□□ -0.74
SPARC-208ENST00000538026 ZNF408Q9H9D4 720 aa10.43□□□□□ -0.74
SPARC-208ENST00000538026 CLRN2A0PK11 232 aa10.42□□□□□ -0.74
SPARC-208ENST00000538026 SURF6O75683 361 aaKnown RBP10.42□□□□□ -0.74
SPARC-208ENST00000538026 CRKP46108 304 aa10.42□□□□□ -0.74
SPARC-208ENST00000538026 RASGRF1Q13972 1273 aa10.42□□□□□ -0.74
SPARC-208ENST00000538026 PDE3AQ14432 1141 aa10.42□□□□□ -0.74
SPARC-208ENST00000538026 DLGAP5Q15398 846 aa10.42□□□□□ -0.74
SPARC-208ENST00000538026 APOBEC3HQ6NTF7 200 aaKnown RBP10.42□□□□□ -0.74
SPARC-208ENST00000538026 PI16Q6UXB8 463 aa10.42□□□□□ -0.74
SPARC-208ENST00000538026 VPS37DQ86XT2 251 aa10.42□□□□□ -0.74
SPARC-208ENST00000538026 SULF1Q8IWU6 871 aa10.42□□□□□ -0.74
SPARC-208ENST00000538026 SERPINA10Q9UK55 444 aa10.42□□□□□ -0.74
SPARC-208ENST00000538026 HDAC9Q9UKV0 1011 aa10.42□□□□□ -0.74
SPARC-208ENST00000538026 ABT1Q9ULW3 272 aaKnown RBP10.42□□□□□ -0.74
SPARC-208ENST00000538026 FZD1Q9UP38 647 aa10.42□□□□□ -0.74
SPARC-208ENST00000538026 SSC5DA1L4H1 1573 aa10.42□□□□□ -0.74
SPARC-208ENST00000538026 MYH2Q9UKX2 1941 aa10.41□□□□□ -0.74
SPARC-208ENST00000538026 WDR33Q9C0J8 1336 aaKnown RBP10.41□□□□□ -0.74
SPARC-208ENST00000538026 FAM155AB1AL88 458 aaPredicted RBP10.41□□□□□ -0.74
SPARC-208ENST00000538026 AOC2O75106 756 aa10.41□□□□□ -0.74
SPARC-208ENST00000538026 PRDX5P30044 214 aa10.41□□□□□ -0.74
SPARC-208ENST00000538026 G3BP1Q13283 466 aaKnown RBP eCLIP10.41□□□□□ -0.74
SPARC-208ENST00000538026 EAF2Q96CJ1 260 aaPredicted RBP10.41□□□□□ -0.74
SPARC-208ENST00000538026 CAPNS2Q96L46 248 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms