RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 ARFGAP3Q9NP61 516 aa18.09■□□□□ 0.49
CHFR-213ENST00000536843 IGKV5-2P06315 115 aa18.08■□□□□ 0.49
CHFR-213ENST00000536843 TMC6Q7Z403 805 aa18.08■□□□□ 0.49
CHFR-213ENST00000536843 DDX54Q8TDD1 881 aaKnown RBP18.08■□□□□ 0.49
CHFR-213ENST00000536843 BICC1Q9H694 974 aaKnown RBP18.08■□□□□ 0.49
CHFR-213ENST00000536843 MEGF6O75095 1541 aa18.08■□□□□ 0.48
CHFR-213ENST00000536843 UTYO14607 1347 aa18.08■□□□□ 0.48
CHFR-213ENST00000536843 MAGEA9P43362 315 aa18.08■□□□□ 0.48
CHFR-213ENST00000536843 LMAN1P49257 510 aa18.08■□□□□ 0.48
CHFR-213ENST00000536843 MAP4K1Q92918 833 aa18.08■□□□□ 0.48
CHFR-213ENST00000536843 NCAPGQ9BPX3 1015 aa18.08■□□□□ 0.48
CHFR-213ENST00000536843 BPIFA3Q9BQP9 254 aa18.08■□□□□ 0.48
CHFR-213ENST00000536843 GOLPH3LQ9H4A5 285 aa18.08■□□□□ 0.48
CHFR-213ENST00000536843 RCOR1Q9UKL0 485 aa18.08■□□□□ 0.48
CHFR-213ENST00000536843 FANCGO15287 622 aa18.07■□□□□ 0.48
CHFR-213ENST00000536843 KINO60870 393 aaKnown RBP18.07■□□□□ 0.48
CHFR-213ENST00000536843 RPS6KA5O75582 802 aa18.07■□□□□ 0.48
CHFR-213ENST00000536843 URI1O94763 535 aaPredicted RBP18.07■□□□□ 0.48
CHFR-213ENST00000536843 CCDC73Q6ZRK6 1079 aa18.07■□□□□ 0.48
CHFR-213ENST00000536843 ERC1Q8IUD2 1116 aa18.07■□□□□ 0.48
CHFR-213ENST00000536843 IFNL2Q8IZJ0 200 aa18.07■□□□□ 0.48
CHFR-213ENST00000536843 ENGASEQ8NFI3 743 aa18.07■□□□□ 0.48
CHFR-213ENST00000536843 XAGE3Q8WTP9 111 aa18.07■□□□□ 0.48
CHFR-213ENST00000536843 CCDC34Q96HJ3 373 aa18.07■□□□□ 0.48
CHFR-213ENST00000536843 ZNF496Q96IT1 587 aaPredicted RBP18.07■□□□□ 0.48
CHFR-213ENST00000536843 XPO4Q9C0E2 1151 aaKnown RBP18.07■□□□□ 0.48
CHFR-213ENST00000536843 IFIT2P09913 472 aaKnown RBP18.07■□□□□ 0.48
CHFR-213ENST00000536843 RPS6KB1P23443 525 aa18.07■□□□□ 0.48
CHFR-213ENST00000536843 TOB2Q14106 344 aaPredicted RBP18.07■□□□□ 0.48
CHFR-213ENST00000536843 BLOC1S2Q6QNY1 142 aa18.07■□□□□ 0.48
CHFR-213ENST00000536843 ECHDC1Q9NTX5 307 aa18.07■□□□□ 0.48
CHFR-213ENST00000536843 JRKLQ9Y4A0 524 aa18.07■□□□□ 0.48
CHFR-213ENST00000536843 SLC27A2O14975 620 aa18.06■□□□□ 0.48
CHFR-213ENST00000536843 FAM160A1Q05DH4 1040 aa18.06■□□□□ 0.48
CHFR-213ENST00000536843 AACSQ86V21 672 aa18.06■□□□□ 0.48
CHFR-213ENST00000536843 SECISBP2LQ93073 1101 aaKnown RBP18.06■□□□□ 0.48
CHFR-213ENST00000536843 MYCBPQ99417 103 aaPredicted RBP18.06■□□□□ 0.48
CHFR-213ENST00000536843 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.06■□□□□ 0.48
CHFR-213ENST00000536843 ADD1P35611 737 aaKnown RBP18.06■□□□□ 0.48
CHFR-213ENST00000536843 TTC31Q49AM3 519 aaPredicted RBP18.06■□□□□ 0.48
CHFR-213ENST00000536843 RSRC2Q7L4I2 434 aaKnown RBP18.06■□□□□ 0.48
CHFR-213ENST00000536843 COPS6Q7L5N1 327 aa18.06■□□□□ 0.48
CHFR-213ENST00000536843 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.06■□□□□ 0.48
CHFR-213ENST00000536843 CYP27B1O15528 508 aa18.05■□□□□ 0.48
CHFR-213ENST00000536843 SASH1O94885 1247 aa18.05■□□□□ 0.48
CHFR-213ENST00000536843 SMC2O95347 1197 aa18.05■□□□□ 0.48
CHFR-213ENST00000536843 COL9A3Q14050 684 aaPredicted RBP18.05■□□□□ 0.48
CHFR-213ENST00000536843 LEKR1Q6ZMV7 388 aa18.05■□□□□ 0.48
CHFR-213ENST00000536843 BRF1Q92994 677 aa18.05■□□□□ 0.48
CHFR-213ENST00000536843 SNRKQ9NRH2 765 aa18.05■□□□□ 0.48
CHFR-213ENST00000536843 IFNKQ9P0W0 207 aa18.05■□□□□ 0.48
CHFR-213ENST00000536843 TNS3Q68CZ2 1445 aa18.05■□□□□ 0.48
CHFR-213ENST00000536843 A0A087WWV3 80 aa18.04■□□□□ 0.48
CHFR-213ENST00000536843 PIP4K2AP48426 406 aaPredicted RBP18.04■□□□□ 0.48
CHFR-213ENST00000536843 G3BP1Q13283 466 aaKnown RBP eCLIP18.04■□□□□ 0.48
CHFR-213ENST00000536843 JAKMIP3Q5VZ66 844 aa18.04■□□□□ 0.48
CHFR-213ENST00000536843 MPHOSPH8Q99549 860 aa18.04■□□□□ 0.48
CHFR-213ENST00000536843 MYD88Q99836 296 aa18.04■□□□□ 0.48
CHFR-213ENST00000536843 NEURL1BA8MQ27 555 aa18.04■□□□□ 0.48
CHFR-213ENST00000536843 H3BQF6 201 aa18.04■□□□□ 0.48
CHFR-213ENST00000536843 MAP2K7O14733 419 aa18.04■□□□□ 0.48
CHFR-213ENST00000536843 FCHSD1Q86WN1 690 aa18.04■□□□□ 0.48
CHFR-213ENST00000536843 RABGGTAQ92696 567 aa18.04■□□□□ 0.48
CHFR-213ENST00000536843 GPATCH3Q96I76 525 aa18.04■□□□□ 0.48
CHFR-213ENST00000536843 PACS2Q86VP3 889 aa18.03■□□□□ 0.48
CHFR-213ENST00000536843 SPATA31A3Q5VYP0 1347 aa18.03■□□□□ 0.48
CHFR-213ENST00000536843 COL18A1P39060 1754 aa18.03■□□□□ 0.48
CHFR-213ENST00000536843 NEXNQ0ZGT2 675 aa18.03■□□□□ 0.48
CHFR-213ENST00000536843 EAF2Q96CJ1 260 aaPredicted RBP18.03■□□□□ 0.48
CHFR-213ENST00000536843 PARD6BQ9BYG5 372 aa18.03■□□□□ 0.48
CHFR-213ENST00000536843 CCDC8Q9H0W5 538 aaPredicted RBP18.03■□□□□ 0.48
CHFR-213ENST00000536843 EPC1Q9H2F5 836 aa18.03■□□□□ 0.48
CHFR-213ENST00000536843 LOC102724159A0A0B4J2E5 919 aa18.02■□□□□ 0.48
CHFR-213ENST00000536843 H3BQV1 296 aa18.02■□□□□ 0.48
CHFR-213ENST00000536843 JAK2O60674 1132 aa18.02■□□□□ 0.48
CHFR-213ENST00000536843 PSEN1P49768 467 aa18.02■□□□□ 0.48
CHFR-213ENST00000536843 MAP3K9P80192 1104 aa18.02■□□□□ 0.48
CHFR-213ENST00000536843 GCKRQ14397 625 aa18.02■□□□□ 0.48
CHFR-213ENST00000536843 PWP2Q15269 919 aaKnown RBP18.02■□□□□ 0.48
CHFR-213ENST00000536843 TSGA10IPQ3SY00 556 aa18.02■□□□□ 0.48
CHFR-213ENST00000536843 IFFO2Q5TF58 517 aa18.02■□□□□ 0.48
CHFR-213ENST00000536843 MSL3Q8N5Y2 521 aaKnown RBP18.02■□□□□ 0.48
CHFR-213ENST00000536843 EVI5LQ96CN4 794 aa18.02■□□□□ 0.48
CHFR-213ENST00000536843 DCAF5Q96JK2 942 aa18.02■□□□□ 0.48
CHFR-213ENST00000536843 METTL22Q9BUU2 404 aaPredicted RBP18.02■□□□□ 0.48
CHFR-213ENST00000536843 SIL1Q9H173 461 aa18.02■□□□□ 0.48
CHFR-213ENST00000536843 SCN11AQ9UI33 1791 aa18.02■□□□□ 0.48
CHFR-213ENST00000536843 C5P01031 1676 aa18.02■□□□□ 0.48
CHFR-213ENST00000536843 CCDC151A5D8V7 595 aa18.02■□□□□ 0.47
CHFR-213ENST00000536843 SNRPA1P09661 255 aaKnown RBP18.02■□□□□ 0.47
CHFR-213ENST00000536843 EPHA10Q5JZY3 1008 aa18.02■□□□□ 0.47
CHFR-213ENST00000536843 ATL3Q6DD88 541 aa18.02■□□□□ 0.47
CHFR-213ENST00000536843 TTC5Q8N0Z6 440 aa18.02■□□□□ 0.47
CHFR-213ENST00000536843 KLHDC4Q8TBB5 520 aa18.02■□□□□ 0.47
CHFR-213ENST00000536843 HIP1O00291 1037 aa18.01■□□□□ 0.47
CHFR-213ENST00000536843 ATP2B1P20020 1258 aa18.01■□□□□ 0.47
CHFR-213ENST00000536843 LONRF2Q1L5Z9 754 aa18.01■□□□□ 0.47
CHFR-213ENST00000536843 LRP10Q7Z4F1 713 aa18.01■□□□□ 0.47
CHFR-213ENST00000536843 TCEANC2Q96MN5 208 aa18.01■□□□□ 0.47
CHFR-213ENST00000536843 MYH15Q9Y2K3 1946 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms