RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 MSTNO14793 375 aa9.62□□□□□ -0.87
CLIP1-207ENST00000536634 TM4SF5O14894 197 aa9.62□□□□□ -0.87
CLIP1-207ENST00000536634 GALNT11Q8NCW6 608 aa9.62□□□□□ -0.87
CLIP1-207ENST00000536634 CCDC74AQ96AQ1 378 aa9.62□□□□□ -0.87
CLIP1-207ENST00000536634 CARD10Q9BWT7 1032 aa9.62□□□□□ -0.87
CLIP1-207ENST00000536634 BHLHE41Q9C0J9 482 aaPredicted RBP9.62□□□□□ -0.87
CLIP1-207ENST00000536634 MUC3BQ9H195 1237 aa9.62□□□□□ -0.87
CLIP1-207ENST00000536634 DNAJC25Q9H1X3 360 aa9.62□□□□□ -0.87
CLIP1-207ENST00000536634 SOX13Q9UN79 622 aa9.62□□□□□ -0.87
CLIP1-207ENST00000536634 SND1Q7KZF4 910 aaKnown RBP eCLIP9.61□□□□□ -0.87
CLIP1-207ENST00000536634 LENG1Q96BZ8 264 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-207ENST00000536634 ASB16Q96NS5 453 aa9.61□□□□□ -0.87
CLIP1-207ENST00000536634 NACC1Q96RE7 527 aa9.61□□□□□ -0.87
CLIP1-207ENST00000536634 TOP2AP11388 1531 aaKnown RBP9.61□□□□□ -0.87
CLIP1-207ENST00000536634 ADAM23O75077 832 aa9.6□□□□□ -0.87
CLIP1-207ENST00000536634 VN1R5Q7Z5H4 357 aa9.6□□□□□ -0.87
CLIP1-207ENST00000536634 ASAP3Q8TDY4 903 aa9.6□□□□□ -0.87
CLIP1-207ENST00000536634 TCF12Q99081 682 aa9.6□□□□□ -0.87
CLIP1-207ENST00000536634 LIN7BQ9HAP6 207 aa9.6□□□□□ -0.87
CLIP1-207ENST00000536634 C9orf172C9J069 976 aa9.59□□□□□ -0.87
CLIP1-207ENST00000536634 H3BRJ5 948 aa9.59□□□□□ -0.87
CLIP1-207ENST00000536634 FSCN2O14926 492 aa9.59□□□□□ -0.87
CLIP1-207ENST00000536634 PLCB3Q01970 1234 aa9.59□□□□□ -0.87
CLIP1-207ENST00000536634 ADGRE1Q14246 886 aa9.59□□□□□ -0.87
CLIP1-207ENST00000536634 MBTPS1Q14703 1052 aa9.59□□□□□ -0.87
CLIP1-207ENST00000536634 KIAA0319Q5VV43 1072 aa9.59□□□□□ -0.87
CLIP1-207ENST00000536634 CCNJLQ8IV13 435 aa9.59□□□□□ -0.87
CLIP1-207ENST00000536634 EPS8L3Q8TE67 593 aaKnown RBP9.59□□□□□ -0.87
CLIP1-207ENST00000536634 BSNDQ8WZ55 320 aa9.59□□□□□ -0.87
CLIP1-207ENST00000536634 SRA1Q9HD15 236 aaKnown RBP9.59□□□□□ -0.87
CLIP1-207ENST00000536634 USP21Q9UK80 565 aa9.59□□□□□ -0.87
CLIP1-207ENST00000536634 TOPBP1Q92547 1522 aa9.59□□□□□ -0.87
CLIP1-207ENST00000536634 PNMA6FA0A0J9YX94 578 aa9.58□□□□□ -0.88
CLIP1-207ENST00000536634 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.58□□□□□ -0.88
CLIP1-207ENST00000536634 GRIA4P48058 902 aa9.58□□□□□ -0.88
CLIP1-207ENST00000536634 FOXD4L6Q3SYB3 417 aaPredicted RBP9.58□□□□□ -0.88
CLIP1-207ENST00000536634 HGSNATQ68CP4 663 aa9.58□□□□□ -0.88
CLIP1-207ENST00000536634 FOXD4L3Q6VB84 417 aaPredicted RBP9.58□□□□□ -0.88
CLIP1-207ENST00000536634 MAP4K3Q8IVH8 894 aa9.58□□□□□ -0.88
CLIP1-207ENST00000536634 ZSCAN29Q8IWY8 852 aaPredicted RBP9.58□□□□□ -0.88
CLIP1-207ENST00000536634 KCNK4Q9NYG8 393 aa9.58□□□□□ -0.88
CLIP1-207ENST00000536634 FAM177BA6PVY3 158 aa9.57□□□□□ -0.88
CLIP1-207ENST00000536634 FMR1Q06787 632 aaKnown RBP eCLIP9.57□□□□□ -0.88
CLIP1-207ENST00000536634 ENOX2Q16206 610 aaKnown RBP9.57□□□□□ -0.88
CLIP1-207ENST00000536634 SPRED3Q2MJR0 410 aa9.57□□□□□ -0.88
CLIP1-207ENST00000536634 IGF2-ASQ6U949 168 aa9.57□□□□□ -0.88
CLIP1-207ENST00000536634 PI16Q6UXB8 463 aa9.57□□□□□ -0.88
CLIP1-207ENST00000536634 SETDB2Q96T68 719 aa9.57□□□□□ -0.88
CLIP1-207ENST00000536634 EHD4Q9H223 541 aa9.57□□□□□ -0.88
CLIP1-207ENST00000536634 DDX3YO15523 660 aaKnown RBP9.56□□□□□ -0.88
CLIP1-207ENST00000536634 GATA4P43694 442 aa9.56□□□□□ -0.88
CLIP1-207ENST00000536634 CABP4P57796 275 aa9.56□□□□□ -0.88
CLIP1-207ENST00000536634 FAM117BQ6P1L5 589 aa9.56□□□□□ -0.88
CLIP1-207ENST00000536634 KRTAP9-2Q9BYQ4 174 aa9.56□□□□□ -0.88
CLIP1-207ENST00000536634 RSF1Q96T23 1441 aaPredicted RBP9.56□□□□□ -0.88
CLIP1-207ENST00000536634 AQRO60306 1485 aaKnown RBP eCLIP9.55□□□□□ -0.887e-7■■■■■ 48.1
CLIP1-207ENST00000536634 A0A096LPE4 126 aa9.55□□□□□ -0.88
CLIP1-207ENST00000536634 A0A1W2PPZ6 126 aa9.55□□□□□ -0.88
CLIP1-207ENST00000536634 ADAM11O75078 769 aa9.55□□□□□ -0.88
CLIP1-207ENST00000536634 WISP1O95388 367 aa9.55□□□□□ -0.88
CLIP1-207ENST00000536634 MAPK8P45983 427 aa9.55□□□□□ -0.88
CLIP1-207ENST00000536634 PIP4K2BP78356 416 aa9.55□□□□□ -0.88
CLIP1-207ENST00000536634 NRG1Q02297 640 aaPredicted RBP9.55□□□□□ -0.88
CLIP1-207ENST00000536634 SLC7A3Q8WY07 619 aa9.55□□□□□ -0.88
CLIP1-207ENST00000536634 KLHDC7BQ96G42 594 aa9.55□□□□□ -0.88
CLIP1-207ENST00000536634 TARBP1Q13395 1621 aaKnown RBP9.55□□□□□ -0.88
CLIP1-207ENST00000536634 SOX1O00570 391 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-207ENST00000536634 GADD45BO75293 160 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-207ENST00000536634 CD68P34810 354 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-207ENST00000536634 GRM2Q14416 872 aa9.54□□□□□ -0.88
CLIP1-207ENST00000536634 TXNRD3Q86VQ6 643 aa9.54□□□□□ -0.88
CLIP1-207ENST00000536634 KLHL23Q8NBE8 558 aa9.54□□□□□ -0.88
CLIP1-207ENST00000536634 FOXD4L4Q8WXT5 416 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-207ENST00000536634 PSMG3-AS1Q96PY0 264 aa9.54□□□□□ -0.88
CLIP1-207ENST00000536634 GZF1Q9H116 711 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-207ENST00000536634 SEC31BQ9NQW1 1179 aa9.54□□□□□ -0.88
CLIP1-207ENST00000536634 ALX3O95076 343 aa9.53□□□□□ -0.88
CLIP1-207ENST00000536634 P4HBP07237 508 aaKnown RBP9.53□□□□□ -0.88
CLIP1-207ENST00000536634 ESRRAP11474 423 aaPredicted RBP9.53□□□□□ -0.88
CLIP1-207ENST00000536634 NOS3P29474 1203 aa9.53□□□□□ -0.88
CLIP1-207ENST00000536634 IKBKEQ14164 716 aa9.53□□□□□ -0.88
CLIP1-207ENST00000536634 GLIS3Q8NEA6 775 aa9.53□□□□□ -0.88
CLIP1-207ENST00000536634 WFDC12Q8WWY7 111 aa9.53□□□□□ -0.88
CLIP1-207ENST00000536634 WNT8BQ93098 351 aa9.53□□□□□ -0.88
CLIP1-207ENST00000536634 MRPL18Q9H0U6 180 aaKnown RBP9.53□□□□□ -0.88
CLIP1-207ENST00000536634 ABCB6Q9NP58 842 aa9.53□□□□□ -0.88
CLIP1-207ENST00000536634 WWC3Q9ULE0 1092 aa9.53□□□□□ -0.88
CLIP1-207ENST00000536634 F8W735 103 aaPredicted RBP9.52□□□□□ -0.89
CLIP1-207ENST00000536634 IREB2P48200 963 aaKnown RBP9.52□□□□□ -0.89
CLIP1-207ENST00000536634 DOC2BQ14184 412 aa9.52□□□□□ -0.89
CLIP1-207ENST00000536634 PRPF40BQ6NWY9 871 aaKnown RBP9.52□□□□□ -0.89
CLIP1-207ENST00000536634 DNMBPQ6XZF7 1577 aa9.52□□□□□ -0.89
CLIP1-207ENST00000536634 HOMEZQ8IX15 550 aa9.52□□□□□ -0.89
CLIP1-207ENST00000536634 AGGF1Q8N302 714 aaeCLIP9.52□□□□□ -0.89
CLIP1-207ENST00000536634 UBASH3BQ8TF42 649 aa9.52□□□□□ -0.89
CLIP1-207ENST00000536634 OSGEPQ9NPF4 335 aa9.52□□□□□ -0.89
CLIP1-207ENST00000536634 NLRP12P59046 1061 aa9.51□□□□□ -0.89
CLIP1-207ENST00000536634 C19orf57Q0VDD7 668 aa9.51□□□□□ -0.89
CLIP1-207ENST00000536634 ZNF423Q2M1K9 1284 aa9.51□□□□□ -0.89
CLIP1-207ENST00000536634 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms