RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 TM6SF1Q9BZW5 370 aa9.19□□□□□ -0.94
CPSF7-216ENST00000536548 TSPYL4Q9UJ04 414 aa9.19□□□□□ -0.94
CPSF7-216ENST00000536548 ZHX1Q9UKY1 873 aaPredicted RBP9.19□□□□□ -0.94
CPSF7-216ENST00000536548 ZBTB1Q9Y2K1 713 aa9.19□□□□□ -0.94
CPSF7-216ENST00000536548 AK9Q5TCS8 1911 aa9.19□□□□□ -0.94
CPSF7-216ENST00000536548 CUL9Q8IWT3 2517 aa9.19□□□□□ -0.94
CPSF7-216ENST00000536548 NEMFO60524 1076 aa9.18□□□□□ -0.94
CPSF7-216ENST00000536548 TRPA1O75762 1119 aa9.18□□□□□ -0.94
CPSF7-216ENST00000536548 ELP1O95163 1332 aa9.18□□□□□ -0.94
CPSF7-216ENST00000536548 SRGNP10124 158 aa9.18□□□□□ -0.94
CPSF7-216ENST00000536548 CYP19A1P11511 503 aaPredicted RBP9.18□□□□□ -0.94
CPSF7-216ENST00000536548 SCNN1DP51172 638 aa9.18□□□□□ -0.94
CPSF7-216ENST00000536548 AK2P54819 239 aa9.18□□□□□ -0.94
CPSF7-216ENST00000536548 KRT85P78386 507 aa9.18□□□□□ -0.94
CPSF7-216ENST00000536548 FKBP4Q02790 459 aaKnown RBP eCLIP9.18□□□□□ -0.94
CPSF7-216ENST00000536548 EIF4A2Q14240 407 aaKnown RBP9.18□□□□□ -0.94
CPSF7-216ENST00000536548 ATP2B3Q16720 1220 aa9.18□□□□□ -0.94
CPSF7-216ENST00000536548 VPS53Q5VIR6 699 aa9.18□□□□□ -0.94
CPSF7-216ENST00000536548 NUP62CLQ9H1M0 184 aa9.18□□□□□ -0.94
CPSF7-216ENST00000536548 ZNF408Q9H9D4 720 aa9.18□□□□□ -0.94
CPSF7-216ENST00000536548 DDX19AQ9NUU7 478 aaKnown RBP9.18□□□□□ -0.94
CPSF7-216ENST00000536548 BABAM1Q9NWV8 329 aa9.18□□□□□ -0.94
CPSF7-216ENST00000536548 SNX14Q9Y5W7 946 aa9.18□□□□□ -0.94
CPSF7-216ENST00000536548 LAMA3Q16787 3333 aa9.18□□□□□ -0.94
CPSF7-216ENST00000536548 COL4A5P29400 1685 aa9.17□□□□□ -0.94
CPSF7-216ENST00000536548 CDC25BP30305 580 aa9.17□□□□□ -0.94
CPSF7-216ENST00000536548 FOXD4L6Q3SYB3 417 aaPredicted RBP9.17□□□□□ -0.94
CPSF7-216ENST00000536548 CCDC93Q567U6 631 aa9.17□□□□□ -0.94
CPSF7-216ENST00000536548 SOGA3Q5TF21 947 aa9.17□□□□□ -0.94
CPSF7-216ENST00000536548 RNF20Q5VTR2 975 aa9.17□□□□□ -0.94
CPSF7-216ENST00000536548 STYK1Q6J9G0 422 aa9.17□□□□□ -0.94
CPSF7-216ENST00000536548 GIMAP6Q6P9H5 292 aa9.17□□□□□ -0.94
CPSF7-216ENST00000536548 FOXD4L3Q6VB84 417 aaPredicted RBP9.17□□□□□ -0.94
CPSF7-216ENST00000536548 SYNE4Q8N205 404 aa9.17□□□□□ -0.94
CPSF7-216ENST00000536548 GLIS2Q9BZE0 524 aaPredicted RBP9.17□□□□□ -0.94
CPSF7-216ENST00000536548 PYCARDQ9ULZ3 195 aa9.17□□□□□ -0.94
CPSF7-216ENST00000536548 TTC41PQ6P2S7 1318 aa9.16□□□□□ -0.94
CPSF7-216ENST00000536548 AKAP11Q9UKA4 1901 aa9.16□□□□□ -0.94
CPSF7-216ENST00000536548 UBTFL1P0CB47 393 aaPredicted RBP9.16□□□□□ -0.94
CPSF7-216ENST00000536548 IARSP41252 1262 aaKnown RBP9.16□□□□□ -0.94
CPSF7-216ENST00000536548 FLIIQ13045 1269 aa9.16□□□□□ -0.94
CPSF7-216ENST00000536548 NOGQ13253 232 aa9.16□□□□□ -0.94
CPSF7-216ENST00000536548 DLK2Q6UY11 383 aa9.16□□□□□ -0.94
CPSF7-216ENST00000536548 ZNF771Q7L3S4 317 aaPredicted RBP9.16□□□□□ -0.94
CPSF7-216ENST00000536548 MCM10Q7L590 875 aa9.16□□□□□ -0.94
CPSF7-216ENST00000536548 CTU1Q7Z7A3 348 aaKnown RBP9.16□□□□□ -0.94
CPSF7-216ENST00000536548 DRC7Q8IY82 874 aa9.16□□□□□ -0.94
CPSF7-216ENST00000536548 SLC17A8Q8NDX2 589 aa9.16□□□□□ -0.94
CPSF7-216ENST00000536548 CCDC112Q8NEF3 446 aa9.16□□□□□ -0.94
CPSF7-216ENST00000536548 SSH3Q8TE77 659 aa9.16□□□□□ -0.94
CPSF7-216ENST00000536548 KIF1BPQ96EK5 621 aa9.16□□□□□ -0.94
CPSF7-216ENST00000536548 MASTLQ96GX5 879 aa9.16□□□□□ -0.94
CPSF7-216ENST00000536548 GPATCH3Q96I76 525 aa9.16□□□□□ -0.94
CPSF7-216ENST00000536548 HHIPL1Q96JK4 782 aa9.16□□□□□ -0.94
CPSF7-216ENST00000536548 SCAND2PQ9GZW5 306 aaPredicted RBP9.16□□□□□ -0.94
CPSF7-216ENST00000536548 LSG1Q9H089 658 aaKnown RBP9.16□□□□□ -0.94
CPSF7-216ENST00000536548 KCNF1Q9H3M0 494 aa9.16□□□□□ -0.94
CPSF7-216ENST00000536548 PDRG1Q9NUG6 133 aa9.16□□□□□ -0.94
CPSF7-216ENST00000536548 RNF186Q9NXI6 227 aa9.16□□□□□ -0.94
CPSF7-216ENST00000536548 MTMR6Q9Y217 621 aa9.16□□□□□ -0.94
CPSF7-216ENST00000536548 CYP46A1Q9Y6A2 500 aa9.16□□□□□ -0.94
CPSF7-216ENST00000536548 CCDC66A2RUB6 948 aa9.15□□□□□ -0.94
CPSF7-216ENST00000536548 GOLGA6L4A6NEF3 574 aa9.15□□□□□ -0.94
CPSF7-216ENST00000536548 F6X3S4 739 aa9.15□□□□□ -0.94
CPSF7-216ENST00000536548 KIF2AO00139 706 aaPredicted RBP9.15□□□□□ -0.94
CPSF7-216ENST00000536548 HIP1O00291 1037 aa9.15□□□□□ -0.94
CPSF7-216ENST00000536548 GLRX3O76003 335 aaKnown RBP9.15□□□□□ -0.94
CPSF7-216ENST00000536548 PSMA5P28066 241 aa9.15□□□□□ -0.94
CPSF7-216ENST00000536548 GJB2P29033 226 aa9.15□□□□□ -0.94
CPSF7-216ENST00000536548 LMOD1P29536 600 aaPredicted RBP9.15□□□□□ -0.94
CPSF7-216ENST00000536548 TYRO3Q06418 890 aa9.15□□□□□ -0.94
CPSF7-216ENST00000536548 DHX8Q14562 1220 aaKnown RBP9.15□□□□□ -0.94
CPSF7-216ENST00000536548 ANKRD1Q15327 319 aa9.15□□□□□ -0.94
CPSF7-216ENST00000536548 ZNF530Q6P9A1 599 aaPredicted RBP9.15□□□□□ -0.94
CPSF7-216ENST00000536548 USP50Q70EL3 339 aaPredicted RBP9.15□□□□□ -0.94
CPSF7-216ENST00000536548 RUFY3Q7L099 469 aa9.15□□□□□ -0.94
CPSF7-216ENST00000536548 G2E3Q7L622 706 aa9.15□□□□□ -0.94
CPSF7-216ENST00000536548 C17orf53Q8N3J3 647 aaPredicted RBP9.15□□□□□ -0.94
CPSF7-216ENST00000536548 SPC24Q8NBT2 197 aa9.15□□□□□ -0.94
CPSF7-216ENST00000536548 TDRD7Q8NHU6 1098 aaKnown RBP9.15□□□□□ -0.94
CPSF7-216ENST00000536548 TSC1Q92574 1164 aa9.15□□□□□ -0.94
CPSF7-216ENST00000536548 KCNB2Q92953 911 aa9.15□□□□□ -0.94
CPSF7-216ENST00000536548 TNMDQ9H2S6 317 aa9.15□□□□□ -0.94
CPSF7-216ENST00000536548 HDAC5Q9UQL6 1122 aa9.15□□□□□ -0.94
CPSF7-216ENST00000536548 BCORQ6W2J9 1755 aa9.14□□□□□ -0.95
CPSF7-216ENST00000536548 PNMA6EA0A0J9YXQ4 647 aa9.14□□□□□ -0.95
CPSF7-216ENST00000536548 FAM155AB1AL88 458 aaPredicted RBP9.14□□□□□ -0.95
CPSF7-216ENST00000536548 TNNT1P13805 278 aa9.14□□□□□ -0.95
CPSF7-216ENST00000536548 ZKSCAN1P17029 563 aaPredicted RBP9.14□□□□□ -0.95
CPSF7-216ENST00000536548 PTGS1P23219 599 aa9.14□□□□□ -0.95
CPSF7-216ENST00000536548 U2AF2P26368 475 aaKnown RBP eCLIP9.14□□□□□ -0.959e-9■■■□□ 15
CPSF7-216ENST00000536548 ZNF75DP51815 510 aa9.14□□□□□ -0.95
CPSF7-216ENST00000536548 KIF23Q02241 960 aaPredicted RBP9.14□□□□□ -0.95
CPSF7-216ENST00000536548 DNM1Q05193 864 aaKnown RBP9.14□□□□□ -0.95
CPSF7-216ENST00000536548 NCBP1Q09161 790 aaKnown RBP9.14□□□□□ -0.95
CPSF7-216ENST00000536548 SLC39A6Q13433 755 aa9.14□□□□□ -0.95
CPSF7-216ENST00000536548 POLA2Q14181 598 aa9.14□□□□□ -0.95
CPSF7-216ENST00000536548 AKAP4Q5JQC9 854 aa9.14□□□□□ -0.95
CPSF7-216ENST00000536548 TSHZ3Q63HK5 1081 aa9.14□□□□□ -0.95
CPSF7-216ENST00000536548 MPNDQ8N594 471 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms