RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 TRAF5O00463 557 aa16.75■□□□□ 0.27
RPAIN-205ENST00000536255 FGFR2P21802 821 aa16.75■□□□□ 0.27
RPAIN-205ENST00000536255 AAMPQ13685 434 aa16.75■□□□□ 0.27
RPAIN-205ENST00000536255 OGFOD1Q8N543 542 aa16.75■□□□□ 0.27
RPAIN-205ENST00000536255 TDRD7Q8NHU6 1098 aaKnown RBP16.75■□□□□ 0.27
RPAIN-205ENST00000536255 GLIS2Q9BZE0 524 aaPredicted RBP16.75■□□□□ 0.27
RPAIN-205ENST00000536255 SASH1O94885 1247 aa16.74■□□□□ 0.27
RPAIN-205ENST00000536255 IFIT1P09914 478 aaKnown RBP16.74■□□□□ 0.27
RPAIN-205ENST00000536255 MMP14P50281 582 aa16.74■□□□□ 0.27
RPAIN-205ENST00000536255 CAVIN4Q5BKX8 364 aa16.74■□□□□ 0.27
RPAIN-205ENST00000536255 CDC37L1Q7L3B6 337 aa16.74■□□□□ 0.27
RPAIN-205ENST00000536255 FBXO33Q7Z6M2 555 aa16.74■□□□□ 0.27
RPAIN-205ENST00000536255 VPS37DQ86XT2 251 aa16.74■□□□□ 0.27
RPAIN-205ENST00000536255 CERS5Q8N5B7 392 aa16.74■□□□□ 0.27
RPAIN-205ENST00000536255 KLRG1Q96E93 195 aa16.74■□□□□ 0.27
RPAIN-205ENST00000536255 SURF6O75683 361 aaKnown RBP16.73■□□□□ 0.27
RPAIN-205ENST00000536255 SLC5A1P13866 664 aa16.73■□□□□ 0.27
RPAIN-205ENST00000536255 FKBP1AP62942 108 aaKnown RBP16.73■□□□□ 0.27
RPAIN-205ENST00000536255 FMR1Q06787 632 aaKnown RBP eCLIP16.73■□□□□ 0.27
RPAIN-205ENST00000536255 OS9Q13438 667 aaPredicted RBP16.73■□□□□ 0.27
RPAIN-205ENST00000536255 KIAA0825Q8IV33 1275 aa16.73■□□□□ 0.27
RPAIN-205ENST00000536255 LPIN2Q92539 896 aa16.73■□□□□ 0.27
RPAIN-205ENST00000536255 DCPSQ96C86 337 aaKnown RBP16.73■□□□□ 0.27
RPAIN-205ENST00000536255 CRBNQ96SW2 442 aa16.73■□□□□ 0.27
RPAIN-205ENST00000536255 GGA3Q9NZ52 723 aa16.73■□□□□ 0.27
RPAIN-205ENST00000536255 FAM205AQ6ZU69 1335 aa16.72■□□□□ 0.27
RPAIN-205ENST00000536255 SCARF1Q14162 830 aa16.72■□□□□ 0.27
RPAIN-205ENST00000536255 HSP90AB4PQ58FF6 505 aa16.72■□□□□ 0.27
RPAIN-205ENST00000536255 KRT26Q7Z3Y9 468 aa16.72■□□□□ 0.27
RPAIN-205ENST00000536255 HDAC9Q9UKV0 1011 aa16.72■□□□□ 0.27
RPAIN-205ENST00000536255 JAG2Q9Y219 1238 aa16.72■□□□□ 0.27
RPAIN-205ENST00000536255 AKAP2Q9Y2D5 859 aa16.72■□□□□ 0.27
RPAIN-205ENST00000536255 NOP58Q9Y2X3 529 aaKnown RBP16.72■□□□□ 0.27
RPAIN-205ENST00000536255 ASTN2O75129 1339 aaPredicted RBP16.71■□□□□ 0.27
RPAIN-205ENST00000536255 BCAMP50895 628 aa16.71■□□□□ 0.27
RPAIN-205ENST00000536255 ATP2B3Q16720 1220 aa16.71■□□□□ 0.27
RPAIN-205ENST00000536255 USP48Q86UV5 1035 aa16.71■□□□□ 0.27
RPAIN-205ENST00000536255 CENPBP07199 599 aaPredicted RBP16.7■□□□□ 0.26
RPAIN-205ENST00000536255 MFSD14BQ5SR56 506 aa16.7■□□□□ 0.26
RPAIN-205ENST00000536255 ANGEL2Q5VTE6 544 aaKnown RBP16.7■□□□□ 0.26
RPAIN-205ENST00000536255 CST9Q5W186 159 aa16.7■□□□□ 0.26
RPAIN-205ENST00000536255 ERC1Q8IUD2 1116 aa16.7■□□□□ 0.26
RPAIN-205ENST00000536255 IQSEC3Q9UPP2 1182 aaPredicted RBP16.7■□□□□ 0.26
RPAIN-205ENST00000536255 ADM5C9JUS6 153 aa16.69■□□□□ 0.26
RPAIN-205ENST00000536255 WNT10BO00744 389 aa16.69■□□□□ 0.26
RPAIN-205ENST00000536255 FRAT2O75474 233 aaPredicted RBP16.69■□□□□ 0.26
RPAIN-205ENST00000536255 CELF2O95319 508 aaKnown RBP16.69■□□□□ 0.26
RPAIN-205ENST00000536255 NBPF9Q3BBW0 867 aa16.69■□□□□ 0.26
RPAIN-205ENST00000536255 SULF1Q8IWU6 871 aa16.69■□□□□ 0.26
RPAIN-205ENST00000536255 MKRN1Q9UHC7 482 aaKnown RBP16.69■□□□□ 0.26
RPAIN-205ENST00000536255 PITPNM2Q9BZ72 1349 aa16.69■□□□□ 0.26
RPAIN-205ENST00000536255 CNTNAP1P78357 1384 aa16.68■□□□□ 0.26
RPAIN-205ENST00000536255 F8W031 263 aaPredicted RBP16.68■□□□□ 0.26
RPAIN-205ENST00000536255 TFCP2Q12800 502 aa16.68■□□□□ 0.26
RPAIN-205ENST00000536255 SIRT2Q8IXJ6 389 aa16.68■□□□□ 0.26
RPAIN-205ENST00000536255 ABT1Q9ULW3 272 aaKnown RBP16.68■□□□□ 0.26
RPAIN-205ENST00000536255 CHAF1AQ13111 956 aaPredicted RBP16.67■□□□□ 0.26
RPAIN-205ENST00000536255 DLK2Q6UY11 383 aa16.67■□□□□ 0.26
RPAIN-205ENST00000536255 JMYQ8N9B5 988 aa16.67■□□□□ 0.26
RPAIN-205ENST00000536255 TBC1D22AQ8WUA7 517 aa16.67■□□□□ 0.26
RPAIN-205ENST00000536255 ZBED3Q96IU2 234 aaPredicted RBP16.67■□□□□ 0.26
RPAIN-205ENST00000536255 ZNF408Q9H9D4 720 aa16.67■□□□□ 0.26
RPAIN-205ENST00000536255 ARAP2Q8WZ64 1704 aa16.67■□□□□ 0.26
RPAIN-205ENST00000536255 TRPM7Q96QT4 1865 aa16.67■□□□□ 0.26
RPAIN-205ENST00000536255 RASSF10A6NK89 507 aa16.66■□□□□ 0.26
RPAIN-205ENST00000536255 RAB11FIP3O75154 756 aa16.66■□□□□ 0.26
RPAIN-205ENST00000536255 DLGAP5Q15398 846 aa16.66■□□□□ 0.26
RPAIN-205ENST00000536255 MTMR14Q8NCE2 650 aa16.66■□□□□ 0.26
RPAIN-205ENST00000536255 GPR108Q9NPR9 543 aa16.66■□□□□ 0.26
RPAIN-205ENST00000536255 GNL3LQ9NVN8 582 aaKnown RBP16.66■□□□□ 0.26
RPAIN-205ENST00000536255 EXOC6BQ9Y2D4 811 aa16.66■□□□□ 0.26
RPAIN-205ENST00000536255 A0A1B0GUL7 405 aa16.65■□□□□ 0.26
RPAIN-205ENST00000536255 ADORA1P30542 326 aa16.65■□□□□ 0.26
RPAIN-205ENST00000536255 DEFB115Q30KQ5 88 aa16.65■□□□□ 0.26
RPAIN-205ENST00000536255 EXOC6Q8TAG9 804 aa16.65■□□□□ 0.26
RPAIN-205ENST00000536255 TTF2Q9UNY4 1162 aaKnown RBP16.65■□□□□ 0.26
RPAIN-205ENST00000536255 TLL2Q9Y6L7 1015 aa16.65■□□□□ 0.26
RPAIN-205ENST00000536255 SPDYE2BA6NHP3 402 aa16.64■□□□□ 0.25
RPAIN-205ENST00000536255 SPDYE6P0CI01 402 aa16.64■□□□□ 0.25
RPAIN-205ENST00000536255 PHKA1P46020 1223 aa16.64■□□□□ 0.25
RPAIN-205ENST00000536255 TIMM10P62072 90 aa16.64■□□□□ 0.25
RPAIN-205ENST00000536255 CFAP100Q494V2 611 aa16.64■□□□□ 0.25
RPAIN-205ENST00000536255 SAPCD2Q86UD0 394 aa16.64■□□□□ 0.25
RPAIN-205ENST00000536255 KIF1BPQ96EK5 621 aa16.64■□□□□ 0.25
RPAIN-205ENST00000536255 CDCA5Q96FF9 252 aa16.64■□□□□ 0.25
RPAIN-205ENST00000536255 NEUROD6Q96NK8 337 aa16.64■□□□□ 0.25
RPAIN-205ENST00000536255 SERPINA10Q9UK55 444 aa16.64■□□□□ 0.25
RPAIN-205ENST00000536255 PCDHB15Q9Y5E8 787 aa16.64■□□□□ 0.25
RPAIN-205ENST00000536255 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.64■□□□□ 0.25
RPAIN-205ENST00000536255 COL1A1P02452 1464 aaPredicted RBP16.64■□□□□ 0.25
RPAIN-205ENST00000536255 SEMA3EO15041 775 aa16.63■□□□□ 0.25
RPAIN-205ENST00000536255 VEGFBP49765 207 aa16.63■□□□□ 0.25
RPAIN-205ENST00000536255 RBM5P52756 815 aaKnown RBP eCLIP16.63■□□□□ 0.25
RPAIN-205ENST00000536255 GRIK5Q16478 980 aa16.63■□□□□ 0.25
RPAIN-205ENST00000536255 TNNI3KQ59H18 835 aa16.63■□□□□ 0.25
RPAIN-205ENST00000536255 GORABQ5T7V8 394 aa16.63■□□□□ 0.25
RPAIN-205ENST00000536255 CCDC102BQ68D86 513 aa16.63■□□□□ 0.25
RPAIN-205ENST00000536255 APOBEC3FQ8IUX4 373 aaKnown RBP16.63■□□□□ 0.25
RPAIN-205ENST00000536255 WDR66Q8TBY9 1149 aa16.63■□□□□ 0.25
RPAIN-205ENST00000536255 RHPN1Q8TCX5 695 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms