RNA–Protein interactions for RNA: ENST00000536226.1

CRNKL1-207, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRNKL1, Length 4,009 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-207ENST00000536226 UTP14AQ9BVJ6 771 aaKnown RBP9.2□□□□□ -0.94
CRNKL1-207ENST00000536226 MMADHCQ9H3L0 296 aaPredicted RBP9.2□□□□□ -0.94
CRNKL1-207ENST00000536226 RABL2BQ9UNT1 228 aa9.2□□□□□ -0.94
CRNKL1-207ENST00000536226 MECOMQ03112 1051 aa9.2□□□□□ -0.94
CRNKL1-207ENST00000536226 FOXD4Q12950 439 aaPredicted RBP9.2□□□□□ -0.94
CRNKL1-207ENST00000536226 BRD3Q15059 726 aa9.2□□□□□ -0.94
CRNKL1-207ENST00000536226 RCSD1Q6JBY9 416 aa9.2□□□□□ -0.94
CRNKL1-207ENST00000536226 RBM12BQ8IXT5 1001 aaKnown RBP9.2□□□□□ -0.94
CRNKL1-207ENST00000536226 CCDC170Q8IYT3 715 aa9.2□□□□□ -0.94
CRNKL1-207ENST00000536226 ZSCAN16Q9H4T2 348 aaPredicted RBP9.2□□□□□ -0.94
CRNKL1-207ENST00000536226 LUC7LQ9NQ29 371 aaKnown RBP9.2□□□□□ -0.94
CRNKL1-207ENST00000536226 ZNF232Q9UNY5 417 aa9.2□□□□□ -0.94
CRNKL1-207ENST00000536226 RIPOR2Q9Y4F9 1068 aa9.2□□□□□ -0.94
CRNKL1-207ENST00000536226 CDC45O75419 566 aa9.19□□□□□ -0.94
CRNKL1-207ENST00000536226 RBM6P78332 1123 aaKnown RBP9.19□□□□□ -0.94
CRNKL1-207ENST00000536226 GNPTABQ3T906 1256 aa9.19□□□□□ -0.94
CRNKL1-207ENST00000536226 C3orf20Q8ND61 904 aa9.19□□□□□ -0.94
CRNKL1-207ENST00000536226 SPAG5Q96R06 1193 aa9.19□□□□□ -0.94
CRNKL1-207ENST00000536226 NUP62CLQ9H1M0 184 aa9.19□□□□□ -0.94
CRNKL1-207ENST00000536226 TNMDQ9H2S6 317 aa9.19□□□□□ -0.94
CRNKL1-207ENST00000536226 ZCCHC17Q9NP64 241 aaKnown RBP9.19□□□□□ -0.94
CRNKL1-207ENST00000536226 IQSEC3Q9UPP2 1182 aaPredicted RBP9.19□□□□□ -0.94
CRNKL1-207ENST00000536226 USP54Q70EL1 1684 aa9.19□□□□□ -0.94
CRNKL1-207ENST00000536226 FIBPO43427 364 aa9.19□□□□□ -0.94
CRNKL1-207ENST00000536226 KRT38O76015 456 aa9.19□□□□□ -0.94
CRNKL1-207ENST00000536226 STK10O94804 968 aaKnown RBP9.19□□□□□ -0.94
CRNKL1-207ENST00000536226 FCHSD2O94868 740 aa9.19□□□□□ -0.94
CRNKL1-207ENST00000536226 TRIM29Q14134 588 aa9.19□□□□□ -0.94
CRNKL1-207ENST00000536226 ARMC3Q5W041 872 aa9.19□□□□□ -0.94
CRNKL1-207ENST00000536226 CCDC150Q8NCX0 1101 aa9.19□□□□□ -0.94
CRNKL1-207ENST00000536226 RASSF8Q8NHQ8 419 aa9.19□□□□□ -0.94
CRNKL1-207ENST00000536226 PARD3BQ8TEW8 1205 aa9.19□□□□□ -0.94
CRNKL1-207ENST00000536226 EZH1Q92800 747 aaPredicted RBP9.19□□□□□ -0.94
CRNKL1-207ENST00000536226 COL3A1P02461 1466 aaPredicted RBP9.19□□□□□ -0.94
CRNKL1-207ENST00000536226 SOS1Q07889 1333 aaPredicted RBP9.19□□□□□ -0.94
CRNKL1-207ENST00000536226 CPP00450 1065 aa9.19□□□□□ -0.94
CRNKL1-207ENST00000536226 CCNHP51946 323 aaPredicted RBP9.19□□□□□ -0.94
CRNKL1-207ENST00000536226 IDI1Q13907 227 aa9.19□□□□□ -0.94
CRNKL1-207ENST00000536226 Q4G0T1 1027 aa9.19□□□□□ -0.94
CRNKL1-207ENST00000536226 CCDC178Q5BJE1 867 aa9.19□□□□□ -0.94
CRNKL1-207ENST00000536226 BHMTQ93088 406 aa9.19□□□□□ -0.94
CRNKL1-207ENST00000536226 ABCF2Q9UG63 623 aa9.19□□□□□ -0.94
CRNKL1-207ENST00000536226 ITGB1BP2Q9UKP3 347 aa9.19□□□□□ -0.94
CRNKL1-207ENST00000536226 SLIT1O75093 1534 aa9.18□□□□□ -0.94
CRNKL1-207ENST00000536226 USP19O94966 1318 aa9.18□□□□□ -0.94
CRNKL1-207ENST00000536226 EFCAB8A8MWE9 144 aa9.18□□□□□ -0.94
CRNKL1-207ENST00000536226 CD151P48509 253 aa9.18□□□□□ -0.94
CRNKL1-207ENST00000536226 CCDC40Q4G0X9 1142 aa9.18□□□□□ -0.94
CRNKL1-207ENST00000536226 ITPRIPQ8IWB1 547 aa9.18□□□□□ -0.94
CRNKL1-207ENST00000536226 GAS2L2Q8NHY3 880 aa9.18□□□□□ -0.94
CRNKL1-207ENST00000536226 USP6NLQ92738 828 aa9.18□□□□□ -0.94
CRNKL1-207ENST00000536226 JAKMIP2Q96AA8 810 aa9.18□□□□□ -0.94
CRNKL1-207ENST00000536226 CARD14Q9BXL6 1004 aa9.18□□□□□ -0.94
CRNKL1-207ENST00000536226 ARHGAP23Q9P227 1491 aa9.18□□□□□ -0.94
CRNKL1-207ENST00000536226 PPFIA3O75145 1194 aa9.18□□□□□ -0.94
CRNKL1-207ENST00000536226 YY1P25490 414 aa9.18□□□□□ -0.94
CRNKL1-207ENST00000536226 MTA3Q9BTC8 594 aa9.18□□□□□ -0.94
CRNKL1-207ENST00000536226 TSGA10Q9BZW7 698 aa9.18□□□□□ -0.94
CRNKL1-207ENST00000536226 IQSEC2Q5JU85 1478 aa9.18□□□□□ -0.94
CRNKL1-207ENST00000536226 ISM2Q6H9L7 571 aa9.18□□□□□ -0.94
CRNKL1-207ENST00000536226 BCAS4Q8TDM0 211 aa9.18□□□□□ -0.94
CRNKL1-207ENST00000536226 PANK1Q8TE04 598 aa9.18□□□□□ -0.94
CRNKL1-207ENST00000536226 USP33Q8TEY7 942 aa9.18□□□□□ -0.94
CRNKL1-207ENST00000536226 ANKRD24Q8TF21 1146 aa9.18□□□□□ -0.94
CRNKL1-207ENST00000536226 ZNF483Q8TF39 744 aaPredicted RBP9.18□□□□□ -0.94
CRNKL1-207ENST00000536226 A1CFQ9NQ94 594 aaKnown RBP9.18□□□□□ -0.94
CRNKL1-207ENST00000536226 TBC1D2BQ9UPU7 963 aa9.18□□□□□ -0.94
CRNKL1-207ENST00000536226 SATB2Q9UPW6 733 aa9.18□□□□□ -0.94
CRNKL1-207ENST00000536226 MYO1BO43795 1136 aa9.17□□□□□ -0.94
CRNKL1-207ENST00000536226 TROVE2P10155 538 aaKnown RBP eCLIP9.17□□□□□ -0.94
CRNKL1-207ENST00000536226 NLRP5P59047 1200 aa9.17□□□□□ -0.94
CRNKL1-207ENST00000536226 LRRFIP1Q32MZ4 808 aaKnown RBP9.17□□□□□ -0.94
CRNKL1-207ENST00000536226 KBTBD12Q3ZCT8 623 aa9.17□□□□□ -0.94
CRNKL1-207ENST00000536226 CPLX2Q6PUV4 134 aaKnown RBP9.17□□□□□ -0.94
CRNKL1-207ENST00000536226 SYCP3Q8IZU3 236 aa9.17□□□□□ -0.94
CRNKL1-207ENST00000536226 MTRQ99707 1265 aa9.17□□□□□ -0.94
CRNKL1-207ENST00000536226 FAM184BQ9ULE4 1060 aa9.17□□□□□ -0.94
CRNKL1-207ENST00000536226 RPGRIP1LQ68CZ1 1315 aa9.17□□□□□ -0.94
CRNKL1-207ENST00000536226 TECPR2O15040 1411 aa9.17□□□□□ -0.94
CRNKL1-207ENST00000536226 FERP16591 822 aa9.17□□□□□ -0.94
CRNKL1-207ENST00000536226 PAPOLAP51003 745 aaKnown RBP9.17□□□□□ -0.94
CRNKL1-207ENST00000536226 PPP2R3AQ06190 1150 aa9.17□□□□□ -0.94
CRNKL1-207ENST00000536226 NANOGNBQ7Z5D8 188 aa9.17□□□□□ -0.94
CRNKL1-207ENST00000536226 WDR75Q8IWA0 830 aaKnown RBP9.17□□□□□ -0.94
CRNKL1-207ENST00000536226 ALS2CR12Q96Q35 445 aa9.17□□□□□ -0.94
CRNKL1-207ENST00000536226 HYPKQ9NX55 129 aa9.17□□□□□ -0.94
CRNKL1-207ENST00000536226 BAIAP2L1Q9UHR4 511 aa9.17□□□□□ -0.94
CRNKL1-207ENST00000536226 SEC31AO94979 1220 aaKnown RBP9.17□□□□□ -0.94
CRNKL1-207ENST00000536226 PDE6BP35913 854 aa9.17□□□□□ -0.94
CRNKL1-207ENST00000536226 TXLNAP40222 546 aa9.17□□□□□ -0.94
CRNKL1-207ENST00000536226 IQCB1Q15051 598 aa9.17□□□□□ -0.94
CRNKL1-207ENST00000536226 KIAA0753Q2KHM9 967 aa9.17□□□□□ -0.94
CRNKL1-207ENST00000536226 AKNAD1Q5T1N1 836 aa9.17□□□□□ -0.94
CRNKL1-207ENST00000536226 HELLSQ9NRZ9 838 aa9.17□□□□□ -0.94
CRNKL1-207ENST00000536226 CEP126Q9P2H0 1117 aa9.17□□□□□ -0.94
CRNKL1-207ENST00000536226 PTPRCP08575 1304 aa9.17□□□□□ -0.94
CRNKL1-207ENST00000536226 VPS37CA5D8V6 355 aaPredicted RBP9.16□□□□□ -0.94
CRNKL1-207ENST00000536226 IGHDP01880 384 aa9.16□□□□□ -0.94
CRNKL1-207ENST00000536226 GPTP24298 496 aa9.16□□□□□ -0.94
CRNKL1-207ENST00000536226 PLA2G4AP47712 749 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms