RNA–Protein interactions for RNA: ENST00000536172.5

LMO3-213, Transcript of LIM domain only 3, humanhuman

TSL 3

Gene LMO3, Length 587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-213ENST00000536172 DLGAP5Q15398 846 aa14.13□□□□□ -0.15
LMO3-213ENST00000536172 LDLRAD1Q5T700 205 aa14.13□□□□□ -0.15
LMO3-213ENST00000536172 SCAF8Q9UPN6 1271 aaKnown RBP14.13□□□□□ -0.15
LMO3-213ENST00000536172 PPP1R12BO60237 982 aaPredicted RBP14.12□□□□□ -0.15
LMO3-213ENST00000536172 PTPN12Q05209 780 aaKnown RBP14.12□□□□□ -0.15
LMO3-213ENST00000536172 MAP3K11Q16584 847 aa14.12□□□□□ -0.15
LMO3-213ENST00000536172 FBXO46Q6PJ61 603 aaPredicted RBP14.12□□□□□ -0.15
LMO3-213ENST00000536172 ZNF804AQ7Z570 1209 aa14.12□□□□□ -0.15
LMO3-213ENST00000536172 DEFB129Q9H1M3 183 aa14.12□□□□□ -0.15
LMO3-213ENST00000536172 MANSC4A6NHS7 340 aaPredicted RBP14.11□□□□□ -0.15
LMO3-213ENST00000536172 FKTNO75072 461 aa14.11□□□□□ -0.15
LMO3-213ENST00000536172 ZBTB48P10074 688 aaPredicted RBP14.11□□□□□ -0.15
LMO3-213ENST00000536172 SUPT20HL1Q3ZLR7 823 aa14.11□□□□□ -0.15
LMO3-213ENST00000536172 SPRYD7Q5W111 196 aa14.11□□□□□ -0.15
LMO3-213ENST00000536172 WDR63Q8IWG1 891 aa14.11□□□□□ -0.15
LMO3-213ENST00000536172 ANGEL1Q9UNK9 670 aaKnown RBP14.11□□□□□ -0.15
LMO3-213ENST00000536172 IL1R1P14778 569 aa14.1□□□□□ -0.15
LMO3-213ENST00000536172 KLRK1P26718 216 aa14.1□□□□□ -0.15
LMO3-213ENST00000536172 PRPF38BQ5VTL8 546 aaKnown RBP14.1□□□□□ -0.15
LMO3-213ENST00000536172 SLC10A4Q96EP9 437 aa14.1□□□□□ -0.15
LMO3-213ENST00000536172 FANCIQ9NVI1 1328 aa14.1□□□□□ -0.15
LMO3-213ENST00000536172 IRS2Q9Y4H2 1338 aa14.1□□□□□ -0.15
LMO3-213ENST00000536172 VAMP4O75379 141 aa14.09□□□□□ -0.15
LMO3-213ENST00000536172 FOXO4P98177 505 aa14.09□□□□□ -0.15
LMO3-213ENST00000536172 CCDC57Q2TAC2 916 aa14.09□□□□□ -0.15
LMO3-213ENST00000536172 SPDYE2BA6NHP3 402 aa14.08□□□□□ -0.16
LMO3-213ENST00000536172 SPDYE6P0CI01 402 aa14.08□□□□□ -0.16
LMO3-213ENST00000536172 MKRN3Q13064 507 aaKnown RBP14.08□□□□□ -0.16
LMO3-213ENST00000536172 PRKG1Q13976 671 aa14.08□□□□□ -0.16
LMO3-213ENST00000536172 DIEXFQ68CQ4 756 aaKnown RBP14.08□□□□□ -0.16
LMO3-213ENST00000536172 OTUD7BQ6GQQ9 843 aa14.08□□□□□ -0.16
LMO3-213ENST00000536172 CERS5Q8N5B7 392 aa14.08□□□□□ -0.16
LMO3-213ENST00000536172 TAF5LO75529 589 aa14.07□□□□□ -0.16
LMO3-213ENST00000536172 IREB2P48200 963 aaKnown RBP14.07□□□□□ -0.16
LMO3-213ENST00000536172 TNFAIP1Q13829 316 aa14.07□□□□□ -0.16
LMO3-213ENST00000536172 CFAP100Q494V2 611 aa14.07□□□□□ -0.16
LMO3-213ENST00000536172 TAF7LQ5H9L4 462 aa14.07□□□□□ -0.16
LMO3-213ENST00000536172 BEND3Q5T5X7 828 aa14.07□□□□□ -0.16
LMO3-213ENST00000536172 LDHAL6AQ6ZMR3 332 aa14.07□□□□□ -0.16
LMO3-213ENST00000536172 IFNL1Q8IU54 200 aa14.07□□□□□ -0.16
LMO3-213ENST00000536172 CHMP3Q9Y3E7 222 aa14.07□□□□□ -0.16
LMO3-213ENST00000536172 ARAP2Q8WZ64 1704 aa14.07□□□□□ -0.16
LMO3-213ENST00000536172 GRM8O00222 908 aa14.06□□□□□ -0.16
LMO3-213ENST00000536172 INTS3Q68E01 1043 aaKnown RBP14.06□□□□□ -0.16
LMO3-213ENST00000536172 LMBR1LQ6UX01 489 aa14.06□□□□□ -0.16
LMO3-213ENST00000536172 HELBQ8NG08 1087 aaPredicted RBP14.06□□□□□ -0.16
LMO3-213ENST00000536172 WNK4Q96J92 1243 aa14.06□□□□□ -0.16
LMO3-213ENST00000536172 CNNM1Q9NRU3 951 aa14.06□□□□□ -0.16
LMO3-213ENST00000536172 ALDH1L1O75891 902 aa14.05□□□□□ -0.16
LMO3-213ENST00000536172 RBM5P52756 815 aaKnown RBP eCLIP14.05□□□□□ -0.16
LMO3-213ENST00000536172 EXOSC9Q06265 439 aaKnown RBP14.05□□□□□ -0.16
LMO3-213ENST00000536172 UBE4AQ14139 1066 aa14.05□□□□□ -0.16
LMO3-213ENST00000536172 CCDC184Q52MB2 194 aa14.05□□□□□ -0.16
LMO3-213ENST00000536172 ANKRD13AQ8IZ07 590 aa14.05□□□□□ -0.16
LMO3-213ENST00000536172 PRMT6Q96LA8 375 aaPredicted RBP14.05□□□□□ -0.16
LMO3-213ENST00000536172 C9orf78Q9NZ63 289 aaPredicted RBP14.05□□□□□ -0.16
LMO3-213ENST00000536172 SERPINA10Q9UK55 444 aa14.05□□□□□ -0.16
LMO3-213ENST00000536172 FAM205AQ6ZU69 1335 aa14.05□□□□□ -0.16
LMO3-213ENST00000536172 SSC5DA1L4H1 1573 aa14.05□□□□□ -0.16
LMO3-213ENST00000536172 RBBP6Q7Z6E9 1792 aaKnown RBP14.04□□□□□ -0.16
LMO3-213ENST00000536172 F8W031 263 aaPredicted RBP14.04□□□□□ -0.16
LMO3-213ENST00000536172 SNAP23O00161 211 aa14.04□□□□□ -0.16
LMO3-213ENST00000536172 ERO1AQ96HE7 468 aa14.04□□□□□ -0.16
LMO3-213ENST00000536172 VEZTQ9HBM0 779 aa14.04□□□□□ -0.16
LMO3-213ENST00000536172 MRS2Q9HD23 443 aa14.04□□□□□ -0.16
LMO3-213ENST00000536172 CLRN2A0PK11 232 aa14.03□□□□□ -0.16
LMO3-213ENST00000536172 F6X3S4 739 aa14.03□□□□□ -0.16
LMO3-213ENST00000536172 RASA3Q14644 834 aa14.03□□□□□ -0.16
LMO3-213ENST00000536172 MFSD14BQ5SR56 506 aa14.03□□□□□ -0.16
LMO3-213ENST00000536172 TDRD7Q8NHU6 1098 aaKnown RBP14.03□□□□□ -0.16
LMO3-213ENST00000536172 GCC1Q96CN9 775 aa14.03□□□□□ -0.16
LMO3-213ENST00000536172 CLMNQ96JQ2 1002 aa14.03□□□□□ -0.16
LMO3-213ENST00000536172 R3HDMLQ9H3Y0 253 aa14.03□□□□□ -0.16
LMO3-213ENST00000536172 OTOFQ9HC10 1997 aa14.02□□□□□ -0.16
LMO3-213ENST00000536172 TESPA1A2RU30 521 aaPredicted RBP14.02□□□□□ -0.17
LMO3-213ENST00000536172 PLIN1O60240 522 aa14.02□□□□□ -0.17
LMO3-213ENST00000536172 USP2O75604 605 aaPredicted RBP14.02□□□□□ -0.17
LMO3-213ENST00000536172 HIBADHP31937 336 aaKnown RBP14.02□□□□□ -0.17
LMO3-213ENST00000536172 TNNI2P48788 182 aa14.02□□□□□ -0.17
LMO3-213ENST00000536172 ARHGEF6Q15052 776 aa14.02□□□□□ -0.17
LMO3-213ENST00000536172 SPDYE2Q495Y8 402 aa14.02□□□□□ -0.17
LMO3-213ENST00000536172 NBPF12Q5TAG4 269 aaPredicted RBP14.02□□□□□ -0.17
LMO3-213ENST00000536172 OTOP1Q7RTM1 612 aa14.02□□□□□ -0.17
LMO3-213ENST00000536172 SRCIN1Q9C0H9 1055 aa14.02□□□□□ -0.17
LMO3-213ENST00000536172 TRIM17Q9Y577 477 aa14.02□□□□□ -0.17
LMO3-213ENST00000536172 MROH5Q6ZUA9 1318 aa14.01□□□□□ -0.17
LMO3-213ENST00000536172 IGF2BP3O00425 579 aaKnown RBP eCLIP14.01□□□□□ -0.17
LMO3-213ENST00000536172 ZBTB22O15209 634 aa14.01□□□□□ -0.17
LMO3-213ENST00000536172 ZNF594Q96JF6 807 aaPredicted RBP14.01□□□□□ -0.17
LMO3-213ENST00000536172 TTF2Q9UNY4 1162 aaKnown RBP14.01□□□□□ -0.17
LMO3-213ENST00000536172 FZD1Q9UP38 647 aa14.01□□□□□ -0.17
LMO3-213ENST00000536172 PCDHAC2Q9Y5I4 1007 aa14.01□□□□□ -0.17
LMO3-213ENST00000536172 HDLBPQ00341 1268 aaKnown RBP14□□□□□ -0.17
LMO3-213ENST00000536172 EPHA10Q5JZY3 1008 aa14□□□□□ -0.17
LMO3-213ENST00000536172 VPS37DQ86XT2 251 aa14□□□□□ -0.17
LMO3-213ENST00000536172 TBC1D22AQ8WUA7 517 aa14□□□□□ -0.17
LMO3-213ENST00000536172 FAM84BQ96KN1 310 aaPredicted RBP14□□□□□ -0.17
LMO3-213ENST00000536172 ZNF70Q9UC06 446 aaPredicted RBP14□□□□□ -0.17
LMO3-213ENST00000536172 UTYO14607 1347 aa13.99□□□□□ -0.17
LMO3-213ENST00000536172 SP3Q02447 781 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms