RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 ECM29Q5VYK3 1845 aa16.47■□□□□ 0.23
TNFRSF1A-207ENST00000535958 CASP7P55210 303 aa16.46■□□□□ 0.23
TNFRSF1A-207ENST00000535958 INHBEP58166 350 aa16.46■□□□□ 0.23
TNFRSF1A-207ENST00000535958 CFAP100Q494V2 611 aa16.46■□□□□ 0.23
TNFRSF1A-207ENST00000535958 PRPF38BQ5VTL8 546 aaKnown RBP16.46■□□□□ 0.23
TNFRSF1A-207ENST00000535958 HELBQ8NG08 1087 aaPredicted RBP16.46■□□□□ 0.23
TNFRSF1A-207ENST00000535958 CNNM1Q9NRU3 951 aa16.46■□□□□ 0.23
TNFRSF1A-207ENST00000535958 CLRN2A0PK11 232 aa16.45■□□□□ 0.22
TNFRSF1A-207ENST00000535958 PLIN1O60240 522 aa16.45■□□□□ 0.22
TNFRSF1A-207ENST00000535958 ZBTB48P10074 688 aaPredicted RBP16.45■□□□□ 0.22
TNFRSF1A-207ENST00000535958 IREB2P48200 963 aaKnown RBP16.45■□□□□ 0.22
TNFRSF1A-207ENST00000535958 LDLRAD1Q5T700 205 aa16.45■□□□□ 0.22
TNFRSF1A-207ENST00000535958 MTMR14Q8NCE2 650 aa16.45■□□□□ 0.22
TNFRSF1A-207ENST00000535958 ZBED3Q96IU2 234 aaPredicted RBP16.45■□□□□ 0.22
TNFRSF1A-207ENST00000535958 CFHR5Q9BXR6 569 aa16.45■□□□□ 0.22
TNFRSF1A-207ENST00000535958 SALL2Q9Y467 1007 aaPredicted RBP16.45■□□□□ 0.22
TNFRSF1A-207ENST00000535958 A0A1B0GUL6 1792 aa16.44■□□□□ 0.22
TNFRSF1A-207ENST00000535958 TNRC18O15417 2968 aaPredicted RBP16.44■□□□□ 0.22
TNFRSF1A-207ENST00000535958 TNFAIP1Q13829 316 aa16.44■□□□□ 0.22
TNFRSF1A-207ENST00000535958 NCBP3Q53F19 620 aaKnown RBP16.44■□□□□ 0.22
TNFRSF1A-207ENST00000535958 OTUD7BQ6GQQ9 843 aa16.44■□□□□ 0.22
TNFRSF1A-207ENST00000535958 LDHAL6AQ6ZMR3 332 aa16.44■□□□□ 0.22
TNFRSF1A-207ENST00000535958 C15orf52Q6ZUT6 534 aaKnown RBP16.44■□□□□ 0.22
TNFRSF1A-207ENST00000535958 MRS2Q9HD23 443 aa16.44■□□□□ 0.22
TNFRSF1A-207ENST00000535958 C9orf78Q9NZ63 289 aaPredicted RBP16.44■□□□□ 0.22
TNFRSF1A-207ENST00000535958 FZD1Q9UP38 647 aa16.44■□□□□ 0.22
TNFRSF1A-207ENST00000535958 JAG2Q9Y219 1238 aa16.44■□□□□ 0.22
TNFRSF1A-207ENST00000535958 SPDYE2BA6NHP3 402 aa16.43■□□□□ 0.22
TNFRSF1A-207ENST00000535958 SNAP23O00161 211 aa16.43■□□□□ 0.22
TNFRSF1A-207ENST00000535958 SPDYE6P0CI01 402 aa16.43■□□□□ 0.22
TNFRSF1A-207ENST00000535958 IL1R1P14778 569 aa16.43■□□□□ 0.22
TNFRSF1A-207ENST00000535958 FKBP1AP62942 108 aaKnown RBP16.43■□□□□ 0.22
TNFRSF1A-207ENST00000535958 LMBR1LQ6UX01 489 aa16.43■□□□□ 0.22
TNFRSF1A-207ENST00000535958 IFNL1Q8IU54 200 aa16.43■□□□□ 0.22
TNFRSF1A-207ENST00000535958 CERS5Q8N5B7 392 aa16.43■□□□□ 0.22
TNFRSF1A-207ENST00000535958 WNK4Q96J92 1243 aa16.43■□□□□ 0.22
TNFRSF1A-207ENST00000535958 PCDH10Q9P2E7 1040 aa16.43■□□□□ 0.22
TNFRSF1A-207ENST00000535958 TRIM17Q9Y577 477 aa16.43■□□□□ 0.22
TNFRSF1A-207ENST00000535958 UNCXA6NJT0 531 aa16.42■□□□□ 0.22
TNFRSF1A-207ENST00000535958 F6X3S4 739 aa16.42■□□□□ 0.22
TNFRSF1A-207ENST00000535958 GRM8O00222 908 aa16.42■□□□□ 0.22
TNFRSF1A-207ENST00000535958 FOXO4P98177 505 aa16.42■□□□□ 0.22
TNFRSF1A-207ENST00000535958 EXOSC9Q06265 439 aaKnown RBP16.42■□□□□ 0.22
TNFRSF1A-207ENST00000535958 MAP3K11Q16584 847 aa16.42■□□□□ 0.22
TNFRSF1A-207ENST00000535958 CCDC184Q52MB2 194 aa16.42■□□□□ 0.22
TNFRSF1A-207ENST00000535958 WDR63Q8IWG1 891 aa16.42■□□□□ 0.22
TNFRSF1A-207ENST00000535958 VAMP4O75379 141 aa16.41■□□□□ 0.22
TNFRSF1A-207ENST00000535958 BEND3Q5T5X7 828 aa16.41■□□□□ 0.22
TNFRSF1A-207ENST00000535958 ANKRD13AQ8IZ07 590 aa16.41■□□□□ 0.22
TNFRSF1A-207ENST00000535958 ERO1AQ96HE7 468 aa16.41■□□□□ 0.22
TNFRSF1A-207ENST00000535958 CLMNQ96JQ2 1002 aa16.41■□□□□ 0.22
TNFRSF1A-207ENST00000535958 SSC5DA1L4H1 1573 aa16.41■□□□□ 0.22
TNFRSF1A-207ENST00000535958 MFSD14BQ5SR56 506 aa16.4■□□□□ 0.22
TNFRSF1A-207ENST00000535958 SLC4A10Q6U841 1118 aa16.4■□□□□ 0.22
TNFRSF1A-207ENST00000535958 VPS37DQ86XT2 251 aa16.4■□□□□ 0.22
TNFRSF1A-207ENST00000535958 ZNF594Q96JF6 807 aaPredicted RBP16.4■□□□□ 0.22
TNFRSF1A-207ENST00000535958 PRMT6Q96LA8 375 aaPredicted RBP16.4■□□□□ 0.22
TNFRSF1A-207ENST00000535958 PCDHAC2Q9Y5I4 1007 aa16.4■□□□□ 0.22
TNFRSF1A-207ENST00000535958 IRS2Q9Y4H2 1338 aa16.4■□□□□ 0.22
TNFRSF1A-207ENST00000535958 ANP32CO43423 234 aa16.39■□□□□ 0.21
TNFRSF1A-207ENST00000535958 TNNI2P48788 182 aa16.39■□□□□ 0.21
TNFRSF1A-207ENST00000535958 RASA3Q14644 834 aa16.39■□□□□ 0.21
TNFRSF1A-207ENST00000535958 NBPF12Q5TAG4 269 aaPredicted RBP16.39■□□□□ 0.21
TNFRSF1A-207ENST00000535958 R3HDMLQ9H3Y0 253 aa16.39■□□□□ 0.21
TNFRSF1A-207ENST00000535958 TTF2Q9UNY4 1162 aaKnown RBP16.39■□□□□ 0.21
TNFRSF1A-207ENST00000535958 FRAT2O75474 233 aaPredicted RBP16.38■□□□□ 0.21
TNFRSF1A-207ENST00000535958 INTS3Q68E01 1043 aaKnown RBP16.38■□□□□ 0.21
TNFRSF1A-207ENST00000535958 OTOP1Q7RTM1 612 aa16.38■□□□□ 0.21
TNFRSF1A-207ENST00000535958 SRCIN1Q9C0H9 1055 aa16.38■□□□□ 0.21
TNFRSF1A-207ENST00000535958 SERPINA10Q9UK55 444 aa16.38■□□□□ 0.21
TNFRSF1A-207ENST00000535958 ARAP2Q8WZ64 1704 aa16.38■□□□□ 0.21
TNFRSF1A-207ENST00000535958 IGF2BP3O00425 579 aaKnown RBP eCLIP16.37■□□□□ 0.21
TNFRSF1A-207ENST00000535958 WDHD1O75717 1129 aaPredicted RBP16.37■□□□□ 0.21
TNFRSF1A-207ENST00000535958 ALDH1L1O75891 902 aa16.37■□□□□ 0.21
TNFRSF1A-207ENST00000535958 HIBADHP31937 336 aaKnown RBP16.37■□□□□ 0.21
TNFRSF1A-207ENST00000535958 UBE4AQ14139 1066 aa16.37■□□□□ 0.21
TNFRSF1A-207ENST00000535958 ELP3Q9H9T3 547 aa16.37■□□□□ 0.21
TNFRSF1A-207ENST00000535958 FAM205AQ6ZU69 1335 aa16.37■□□□□ 0.21
TNFRSF1A-207ENST00000535958 LAMB1P07942 1786 aa16.36■□□□□ 0.21
TNFRSF1A-207ENST00000535958 GYG1P46976 350 aa16.36■□□□□ 0.21
TNFRSF1A-207ENST00000535958 CRHR2Q13324 411 aa16.36■□□□□ 0.21
TNFRSF1A-207ENST00000535958 ARHGEF6Q15052 776 aa16.36■□□□□ 0.21
TNFRSF1A-207ENST00000535958 SPDYE2Q495Y8 402 aa16.36■□□□□ 0.21
TNFRSF1A-207ENST00000535958 EPHA10Q5JZY3 1008 aa16.36■□□□□ 0.21
TNFRSF1A-207ENST00000535958 CD99L2Q8TCZ2 262 aa16.36■□□□□ 0.21
TNFRSF1A-207ENST00000535958 GCC1Q96CN9 775 aa16.36■□□□□ 0.21
TNFRSF1A-207ENST00000535958 OPTNQ96CV9 577 aa16.36■□□□□ 0.21
TNFRSF1A-207ENST00000535958 EFCC1Q9HA90 598 aa16.36■□□□□ 0.21
TNFRSF1A-207ENST00000535958 ZNF70Q9UC06 446 aaPredicted RBP16.36■□□□□ 0.21
TNFRSF1A-207ENST00000535958 USP2O75604 605 aaPredicted RBP16.35■□□□□ 0.21
TNFRSF1A-207ENST00000535958 TDRD3Q9H7E2 651 aaKnown RBP16.35■□□□□ 0.21
TNFRSF1A-207ENST00000535958 TMOD2Q9NZR1 351 aa16.35■□□□□ 0.21
TNFRSF1A-207ENST00000535958 CSADQ9Y600 493 aa16.35■□□□□ 0.21
TNFRSF1A-207ENST00000535958 MROH5Q6ZUA9 1318 aa16.35■□□□□ 0.21
TNFRSF1A-207ENST00000535958 OTOFQ9HC10 1997 aa16.35■□□□□ 0.21
TNFRSF1A-207ENST00000535958 TCP10L2B9ZVM9 353 aa16.34■□□□□ 0.21
TNFRSF1A-207ENST00000535958 SP3Q02447 781 aa16.34■□□□□ 0.21
TNFRSF1A-207ENST00000535958 CHAF1AQ13111 956 aaPredicted RBP16.34■□□□□ 0.21
TNFRSF1A-207ENST00000535958 CAVIN4Q5BKX8 364 aa16.34■□□□□ 0.21
TNFRSF1A-207ENST00000535958 DZIP1LQ8IYY4 767 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 161.4 ms