RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 JAG2Q9Y219 1238 aa10.27□□□□□ -0.77
CHFR-211ENST00000535897 PPP2R3BQ9Y5P8 575 aa10.27□□□□□ -0.77
CHFR-211ENST00000535897 ANKRD18BA2A2Z9 1011 aa10.26□□□□□ -0.77
CHFR-211ENST00000535897 IGF2BP3O00425 579 aaKnown RBP eCLIP10.26□□□□□ -0.77
CHFR-211ENST00000535897 TAF5LO75529 589 aa10.26□□□□□ -0.77
CHFR-211ENST00000535897 IREB2P48200 963 aaKnown RBP10.26□□□□□ -0.77
CHFR-211ENST00000535897 FKBP5Q13451 457 aaPredicted RBP10.26□□□□□ -0.77
CHFR-211ENST00000535897 GCKRQ14397 625 aa10.26□□□□□ -0.77
CHFR-211ENST00000535897 TWISTNBQ3B726 338 aaPredicted RBP10.26□□□□□ -0.77
CHFR-211ENST00000535897 CFAP100Q494V2 611 aa10.26□□□□□ -0.77
CHFR-211ENST00000535897 ZNF804AQ7Z570 1209 aa10.26□□□□□ -0.77
CHFR-211ENST00000535897 CERS5Q8N5B7 392 aa10.26□□□□□ -0.77
CHFR-211ENST00000535897 HELBQ8NG08 1087 aaPredicted RBP10.26□□□□□ -0.77
CHFR-211ENST00000535897 CD99L2Q8TCZ2 262 aa10.26□□□□□ -0.77
CHFR-211ENST00000535897 ZBED3Q96IU2 234 aaPredicted RBP10.26□□□□□ -0.77
CHFR-211ENST00000535897 PCDHAC2Q9Y5I4 1007 aa10.26□□□□□ -0.77
CHFR-211ENST00000535897 CENPFP49454 3210 aa10.26□□□□□ -0.77
CHFR-211ENST00000535897 SSC5DA1L4H1 1573 aa10.26□□□□□ -0.77
CHFR-211ENST00000535897 POTEFA5A3E0 1075 aa10.25□□□□□ -0.77
CHFR-211ENST00000535897 SPDYE2BA6NHP3 402 aa10.25□□□□□ -0.77
CHFR-211ENST00000535897 SNAP23O00161 211 aa10.25□□□□□ -0.77
CHFR-211ENST00000535897 SPDYE6P0CI01 402 aa10.25□□□□□ -0.77
CHFR-211ENST00000535897 FLIIQ13045 1269 aa10.25□□□□□ -0.77
CHFR-211ENST00000535897 CRHR2Q13324 411 aa10.25□□□□□ -0.77
CHFR-211ENST00000535897 IFIT5Q13325 482 aaKnown RBP10.25□□□□□ -0.77
CHFR-211ENST00000535897 PLA2G12BQ9BX93 195 aa10.25□□□□□ -0.77
CHFR-211ENST00000535897 PRKRIP1Q9H875 184 aaPredicted RBP10.25□□□□□ -0.77
CHFR-211ENST00000535897 PLIN1O60240 522 aa10.24□□□□□ -0.77
CHFR-211ENST00000535897 CSF1RP07333 972 aa10.24□□□□□ -0.77
CHFR-211ENST00000535897 MAP3K11Q16584 847 aa10.24□□□□□ -0.77
CHFR-211ENST00000535897 TAF7LQ5H9L4 462 aa10.24□□□□□ -0.77
CHFR-211ENST00000535897 NBPF12Q5TAG4 269 aaPredicted RBP10.24□□□□□ -0.77
CHFR-211ENST00000535897 ANKRD13AQ8IZ07 590 aa10.24□□□□□ -0.77
CHFR-211ENST00000535897 MTMR14Q8NCE2 650 aa10.24□□□□□ -0.77
CHFR-211ENST00000535897 LINS1Q8NG48 757 aa10.24□□□□□ -0.77
CHFR-211ENST00000535897 DNAAF4Q8WXU2 420 aa10.24□□□□□ -0.77
CHFR-211ENST00000535897 PRMT6Q96LA8 375 aaPredicted RBP10.24□□□□□ -0.77
CHFR-211ENST00000535897 ELP3Q9H9T3 547 aa10.24□□□□□ -0.77
CHFR-211ENST00000535897 EFCC1Q9HA90 598 aa10.24□□□□□ -0.77
CHFR-211ENST00000535897 PTPN22Q9Y2R2 807 aa10.24□□□□□ -0.77
CHFR-211ENST00000535897 A0A1B0GUL6 1792 aa10.24□□□□□ -0.77
CHFR-211ENST00000535897 LAMB1P07942 1786 aa10.24□□□□□ -0.77
CHFR-211ENST00000535897 RBBP6Q7Z6E9 1792 aaKnown RBP10.24□□□□□ -0.77
CHFR-211ENST00000535897 MKI67P46013 3256 aaKnown RBP10.24□□□□□ -0.77
CHFR-211ENST00000535897 KIAA0100Q14667 2235 aaKnown RBP10.23□□□□□ -0.77
CHFR-211ENST00000535897 UNCXA6NJT0 531 aa10.23□□□□□ -0.77
CHFR-211ENST00000535897 SP3Q02447 781 aa10.23□□□□□ -0.77
CHFR-211ENST00000535897 TNFAIP1Q13829 316 aa10.23□□□□□ -0.77
CHFR-211ENST00000535897 RASA3Q14644 834 aa10.23□□□□□ -0.77
CHFR-211ENST00000535897 HABP4Q5JVS0 413 aaKnown RBP10.23□□□□□ -0.77
CHFR-211ENST00000535897 TMEM106CQ9BVX2 250 aa10.23□□□□□ -0.77
CHFR-211ENST00000535897 OTOFQ9HC10 1997 aa10.23□□□□□ -0.77
CHFR-211ENST00000535897 USP2O75604 605 aaPredicted RBP10.22□□□□□ -0.77
CHFR-211ENST00000535897 IL1R1P14778 569 aa10.22□□□□□ -0.77
CHFR-211ENST00000535897 EN2P19622 333 aaPredicted RBP10.22□□□□□ -0.77
CHFR-211ENST00000535897 GJA5P36382 358 aa10.22□□□□□ -0.77
CHFR-211ENST00000535897 CASP7P55210 303 aa10.22□□□□□ -0.77
CHFR-211ENST00000535897 CCDC57Q2TAC2 916 aa10.22□□□□□ -0.77
CHFR-211ENST00000535897 OPTNQ96CV9 577 aa10.22□□□□□ -0.77
CHFR-211ENST00000535897 CNNM1Q9NRU3 951 aa10.22□□□□□ -0.77
CHFR-211ENST00000535897 AOX1Q06278 1338 aa10.22□□□□□ -0.77
CHFR-211ENST00000535897 CEP290O15078 2479 aa10.22□□□□□ -0.77
CHFR-211ENST00000535897 WDHD1O75717 1129 aaPredicted RBP10.21□□□□□ -0.77
CHFR-211ENST00000535897 MYCP01106 439 aaPredicted RBP10.21□□□□□ -0.77
CHFR-211ENST00000535897 TNNI2P48788 182 aa10.21□□□□□ -0.77
CHFR-211ENST00000535897 FKBP1AP62942 108 aaKnown RBP10.21□□□□□ -0.77
CHFR-211ENST00000535897 ARHGEF6Q15052 776 aa10.21□□□□□ -0.77
CHFR-211ENST00000535897 TAF1CQ15572 869 aaPredicted RBP10.21□□□□□ -0.77
CHFR-211ENST00000535897 SLC9C1Q4G0N8 1177 aa10.21□□□□□ -0.77
CHFR-211ENST00000535897 MFSD14BQ5SR56 506 aa10.21□□□□□ -0.77
CHFR-211ENST00000535897 LMBR1LQ6UX01 489 aa10.21□□□□□ -0.77
CHFR-211ENST00000535897 LDHAL6AQ6ZMR3 332 aa10.21□□□□□ -0.77
CHFR-211ENST00000535897 C15orf52Q6ZUT6 534 aaKnown RBP10.21□□□□□ -0.77
CHFR-211ENST00000535897 ARMC5Q96C12 935 aa10.21□□□□□ -0.77
CHFR-211ENST00000535897 PTPN18Q99952 460 aa10.21□□□□□ -0.77
CHFR-211ENST00000535897 TTF2Q9UNY4 1162 aaKnown RBP10.21□□□□□ -0.77
CHFR-211ENST00000535897 IRS2Q9Y4H2 1338 aa10.21□□□□□ -0.78
CHFR-211ENST00000535897 CCL15-CCL14A0A0B4J2E2 113 aa10.2□□□□□ -0.78
CHFR-211ENST00000535897 TCP10L2B9ZVM9 353 aa10.2□□□□□ -0.78
CHFR-211ENST00000535897 BRCA2P51587 3418 aa10.2□□□□□ -0.78
CHFR-211ENST00000535897 FOXO4P98177 505 aa10.2□□□□□ -0.78
CHFR-211ENST00000535897 CCL15Q16663 113 aa10.2□□□□□ -0.78
CHFR-211ENST00000535897 SLC4A8Q2Y0W8 1093 aa10.2□□□□□ -0.78
CHFR-211ENST00000535897 NBPF11Q86T75 865 aa10.2□□□□□ -0.78
CHFR-211ENST00000535897 WWC1Q8IX03 1113 aa10.2□□□□□ -0.78
CHFR-211ENST00000535897 OTUD5Q96G74 571 aa10.2□□□□□ -0.78
CHFR-211ENST00000535897 ZNF594Q96JF6 807 aaPredicted RBP10.2□□□□□ -0.78
CHFR-211ENST00000535897 TDRD3Q9H7E2 651 aaKnown RBP10.2□□□□□ -0.78
CHFR-211ENST00000535897 ZFYVE28Q9HCC9 887 aa10.2□□□□□ -0.78
CHFR-211ENST00000535897 ZNF70Q9UC06 446 aaPredicted RBP10.2□□□□□ -0.78
CHFR-211ENST00000535897 CSADQ9Y600 493 aa10.2□□□□□ -0.78
CHFR-211ENST00000535897 CACNA1FO60840 1977 aa10.19□□□□□ -0.78
CHFR-211ENST00000535897 FANCIQ9NVI1 1328 aa10.19□□□□□ -0.78
CHFR-211ENST00000535897 TESPA1A2RU30 521 aaPredicted RBP10.19□□□□□ -0.78
CHFR-211ENST00000535897 F6X3S4 739 aa10.19□□□□□ -0.78
CHFR-211ENST00000535897 GYG1P46976 350 aa10.19□□□□□ -0.78
CHFR-211ENST00000535897 GTF2A2P52657 109 aa10.19□□□□□ -0.78
CHFR-211ENST00000535897 VGLL4Q14135 290 aa10.19□□□□□ -0.78
CHFR-211ENST00000535897 CCDC27Q2M243 656 aa10.19□□□□□ -0.78
CHFR-211ENST00000535897 SPDYE2Q495Y8 402 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms