RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 MYOZ2Q9NPC6 264 aa13.63□□□□□ -0.23
CCDC60-202ENST00000535685 FOXN1O15353 648 aa13.62□□□□□ -0.23
CCDC60-202ENST00000535685 NBPF7P0C2Y1 421 aaPredicted RBP13.62□□□□□ -0.23
CCDC60-202ENST00000535685 PRKCSHP14314 528 aaPredicted RBP13.62□□□□□ -0.23
CCDC60-202ENST00000535685 CTCFP49711 727 aaPredicted RBP13.62□□□□□ -0.23
CCDC60-202ENST00000535685 RBM26Q5T8P6 1007 aaKnown RBP13.62□□□□□ -0.23
CCDC60-202ENST00000535685 TTLL5Q6EMB2 1281 aa13.62□□□□□ -0.23
CCDC60-202ENST00000535685 AIDAQ96BJ3 306 aa13.62□□□□□ -0.23
CCDC60-202ENST00000535685 CDCA7LQ96GN5 454 aa13.62□□□□□ -0.23
CCDC60-202ENST00000535685 SUCLG2Q96I99 432 aa13.62□□□□□ -0.23
CCDC60-202ENST00000535685 CD209Q9NNX6 404 aa13.62□□□□□ -0.23
CCDC60-202ENST00000535685 PCDHB8Q9UN66 801 aa13.62□□□□□ -0.23
CCDC60-202ENST00000535685 PCDHB13Q9Y5F0 798 aa13.62□□□□□ -0.23
CCDC60-202ENST00000535685 ECM29Q5VYK3 1845 aa13.62□□□□□ -0.23
CCDC60-202ENST00000535685 IL1R1P14778 569 aa13.61□□□□□ -0.23
CCDC60-202ENST00000535685 KLRK1P26718 216 aa13.61□□□□□ -0.23
CCDC60-202ENST00000535685 KCNJ4P48050 445 aa13.61□□□□□ -0.23
CCDC60-202ENST00000535685 FKBP1AP62942 108 aaKnown RBP13.61□□□□□ -0.23
CCDC60-202ENST00000535685 UBE4AQ14139 1066 aa13.61□□□□□ -0.23
CCDC60-202ENST00000535685 SCARF1Q14162 830 aa13.61□□□□□ -0.23
CCDC60-202ENST00000535685 CYP4F22Q6NT55 531 aa13.61□□□□□ -0.23
CCDC60-202ENST00000535685 LDHAL6AQ6ZMR3 332 aa13.61□□□□□ -0.23
CCDC60-202ENST00000535685 SULF1Q8IWU6 871 aa13.61□□□□□ -0.23
CCDC60-202ENST00000535685 GGA3Q9NZ52 723 aa13.61□□□□□ -0.23
CCDC60-202ENST00000535685 CHMP3Q9Y3E7 222 aa13.61□□□□□ -0.23
CCDC60-202ENST00000535685 CHRDL2Q6WN34 429 aa13.6□□□□□ -0.23
CCDC60-202ENST00000535685 OGFOD1Q8N543 542 aa13.6□□□□□ -0.23
CCDC60-202ENST00000535685 ZBED3Q96IU2 234 aaPredicted RBP13.6□□□□□ -0.23
CCDC60-202ENST00000535685 USP44Q9H0E7 712 aa13.6□□□□□ -0.23
CCDC60-202ENST00000535685 GBA2Q9HCG7 927 aaPredicted RBP13.6□□□□□ -0.23
CCDC60-202ENST00000535685 RIPOR2Q9Y4F9 1068 aa13.6□□□□□ -0.23
CCDC60-202ENST00000535685 TAF5LO75529 589 aa13.59□□□□□ -0.23
CCDC60-202ENST00000535685 FKBP1BP68106 108 aa13.59□□□□□ -0.23
CCDC60-202ENST00000535685 TAF7LQ5H9L4 462 aa13.59□□□□□ -0.23
CCDC60-202ENST00000535685 ZNF804AQ7Z570 1209 aa13.59□□□□□ -0.23
CCDC60-202ENST00000535685 ANKRD44Q8N8A2 993 aa13.59□□□□□ -0.23
CCDC60-202ENST00000535685 C2orf69Q8N8R5 385 aa13.59□□□□□ -0.23
CCDC60-202ENST00000535685 HELBQ8NG08 1087 aaPredicted RBP13.59□□□□□ -0.23
CCDC60-202ENST00000535685 ZNF594Q96JF6 807 aaPredicted RBP13.59□□□□□ -0.23
CCDC60-202ENST00000535685 CNNM1Q9NRU3 951 aa13.59□□□□□ -0.23
CCDC60-202ENST00000535685 ASTN2O75129 1339 aaPredicted RBP13.59□□□□□ -0.23
CCDC60-202ENST00000535685 AKAP11Q9UKA4 1901 aa13.58□□□□□ -0.23
CCDC60-202ENST00000535685 PAPPA2Q9BXP8 1791 aa13.58□□□□□ -0.23
CCDC60-202ENST00000535685 ADM5C9JUS6 153 aa13.58□□□□□ -0.24
CCDC60-202ENST00000535685 SNAP23O00161 211 aa13.58□□□□□ -0.24
CCDC60-202ENST00000535685 WNT10BO00744 389 aa13.58□□□□□ -0.24
CCDC60-202ENST00000535685 HUNKP57058 714 aa13.58□□□□□ -0.24
CCDC60-202ENST00000535685 GTF2IP78347 998 aa13.58□□□□□ -0.24
CCDC60-202ENST00000535685 NOGQ13253 232 aa13.58□□□□□ -0.24
CCDC60-202ENST00000535685 NBR1Q14596 966 aa13.58□□□□□ -0.24
CCDC60-202ENST00000535685 ANGEL2Q5VTE6 544 aaKnown RBP13.58□□□□□ -0.24
CCDC60-202ENST00000535685 TNS4Q8IZW8 715 aa13.58□□□□□ -0.24
CCDC60-202ENST00000535685 MTMR14Q8NCE2 650 aa13.58□□□□□ -0.24
CCDC60-202ENST00000535685 CDCA5Q96FF9 252 aa13.58□□□□□ -0.24
CCDC60-202ENST00000535685 BICC1Q9H694 974 aaKnown RBP13.58□□□□□ -0.24
CCDC60-202ENST00000535685 ZNF408Q9H9D4 720 aa13.58□□□□□ -0.24
CCDC60-202ENST00000535685 HDAC9Q9UKV0 1011 aa13.58□□□□□ -0.24
CCDC60-202ENST00000535685 MROH5Q6ZUA9 1318 aa13.58□□□□□ -0.24
CCDC60-202ENST00000535685 CA12O43570 354 aa13.57□□□□□ -0.24
CCDC60-202ENST00000535685 SASH1O94885 1247 aa13.57□□□□□ -0.24
CCDC60-202ENST00000535685 HSPA8P11142 646 aaKnown RBP13.57□□□□□ -0.24
CCDC60-202ENST00000535685 NBPF9Q3BBW0 867 aa13.57□□□□□ -0.24
CCDC60-202ENST00000535685 RGMBQ6NW40 437 aa13.57□□□□□ -0.24
CCDC60-202ENST00000535685 DLK2Q6UY11 383 aa13.57□□□□□ -0.24
CCDC60-202ENST00000535685 ZNF579Q8NAF0 562 aaKnown RBP13.57□□□□□ -0.24
CCDC60-202ENST00000535685 CCDC102AQ96A19 550 aa13.57□□□□□ -0.24
CCDC60-202ENST00000535685 MXD3Q9BW11 206 aa13.57□□□□□ -0.24
CCDC60-202ENST00000535685 SMC4Q9NTJ3 1288 aa13.57□□□□□ -0.24
CCDC60-202ENST00000535685 FAM205AQ6ZU69 1335 aa13.57□□□□□ -0.24
CCDC60-202ENST00000535685 ARAP2Q8WZ64 1704 aa13.56□□□□□ -0.24
CCDC60-202ENST00000535685 AOC2O75106 756 aa13.56□□□□□ -0.24
CCDC60-202ENST00000535685 PIP4P2Q8N4L2 257 aa13.56□□□□□ -0.24
CCDC60-202ENST00000535685 TDRD7Q8NHU6 1098 aaKnown RBP13.56□□□□□ -0.24
CCDC60-202ENST00000535685 ARHGAP45Q92619 1136 aa13.56□□□□□ -0.24
CCDC60-202ENST00000535685 PUS3Q9BZE2 481 aaKnown RBP13.56□□□□□ -0.24
CCDC60-202ENST00000535685 API5Q9BZZ5 524 aaKnown RBP13.56□□□□□ -0.24
CCDC60-202ENST00000535685 CASP8AP2Q9UKL3 1982 aa13.55□□□□□ -0.24
CCDC60-202ENST00000535685 FAM155AB1AL88 458 aaPredicted RBP13.55□□□□□ -0.24
CCDC60-202ENST00000535685 LBX1P52954 281 aa13.55□□□□□ -0.24
CCDC60-202ENST00000535685 CERS5Q8N5B7 392 aa13.55□□□□□ -0.24
CCDC60-202ENST00000535685 VGLL2Q8N8G2 317 aa13.55□□□□□ -0.24
CCDC60-202ENST00000535685 FBXW7Q969H0 707 aa13.55□□□□□ -0.24
CCDC60-202ENST00000535685 FAM84BQ96KN1 310 aaPredicted RBP13.55□□□□□ -0.24
CCDC60-202ENST00000535685 BEGAINQ9BUH8 593 aa13.55□□□□□ -0.24
CCDC60-202ENST00000535685 KIF16BQ96L93 1317 aa13.55□□□□□ -0.24
CCDC60-202ENST00000535685 COL1A1P02452 1464 aaPredicted RBP13.55□□□□□ -0.24
CCDC60-202ENST00000535685 HIBADHP31937 336 aaKnown RBP13.54□□□□□ -0.24
CCDC60-202ENST00000535685 RFX5P48382 616 aaPredicted RBP13.54□□□□□ -0.24
CCDC60-202ENST00000535685 PSEN1P49768 467 aa13.54□□□□□ -0.24
CCDC60-202ENST00000535685 RARSP54136 660 aaKnown RBP13.54□□□□□ -0.24
CCDC60-202ENST00000535685 FBXO33Q7Z6M2 555 aa13.54□□□□□ -0.24
CCDC60-202ENST00000535685 APOBEC3FQ8IUX4 373 aaKnown RBP13.54□□□□□ -0.24
CCDC60-202ENST00000535685 KIAA0825Q8IV33 1275 aa13.54□□□□□ -0.24
CCDC60-202ENST00000535685 HDAC5Q9UQL6 1122 aa13.54□□□□□ -0.24
CCDC60-202ENST00000535685 PLIN1O60240 522 aa13.53□□□□□ -0.24
CCDC60-202ENST00000535685 PDE8BO95263 885 aa13.53□□□□□ -0.24
CCDC60-202ENST00000535685 SLC10A3P09131 477 aa13.53□□□□□ -0.24
CCDC60-202ENST00000535685 TPRNQ4KMQ1 711 aa13.53□□□□□ -0.24
CCDC60-202ENST00000535685 NOB1Q9ULX3 412 aaKnown RBP13.53□□□□□ -0.24
CCDC60-202ENST00000535685 MYH13Q9UKX3 1938 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms