RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 MMP14P50281 582 aa10.85□□□□□ -0.67
CLIP1-206ENST00000535290 LACTBP83111 547 aaPredicted RBP10.85□□□□□ -0.67
CLIP1-206ENST00000535290 SUPT20HL1Q3ZLR7 823 aa10.85□□□□□ -0.67
CLIP1-206ENST00000535290 CCDC152Q4G0S7 254 aa10.85□□□□□ -0.67
CLIP1-206ENST00000535290 TTLL5Q6EMB2 1281 aa10.85□□□□□ -0.67
CLIP1-206ENST00000535290 ANKRD18AQ8IVF6 992 aa10.85□□□□□ -0.67
CLIP1-206ENST00000535290 ANKRD13AQ8IZ07 590 aa10.85□□□□□ -0.67
CLIP1-206ENST00000535290 ZBTB38Q8NAP3 1195 aaPredicted RBP10.85□□□□□ -0.67
CLIP1-206ENST00000535290 JARID2Q92833 1246 aaPredicted RBP10.85□□□□□ -0.67
CLIP1-206ENST00000535290 COA1Q9GZY4 146 aa10.85□□□□□ -0.67
CLIP1-206ENST00000535290 PSME4Q14997 1843 aa10.85□□□□□ -0.67
CLIP1-206ENST00000535290 MED23Q9ULK4 1368 aa10.85□□□□□ -0.67
CLIP1-206ENST00000535290 AOX1Q06278 1338 aa10.84□□□□□ -0.67
CLIP1-206ENST00000535290 CCL15-CCL14A0A0B4J2E2 113 aa10.84□□□□□ -0.67
CLIP1-206ENST00000535290 CLRN2A0PK11 232 aa10.84□□□□□ -0.67
CLIP1-206ENST00000535290 NEFMP07197 916 aa10.84□□□□□ -0.67
CLIP1-206ENST00000535290 GJB1P08034 283 aa10.84□□□□□ -0.67
CLIP1-206ENST00000535290 DLGAP5Q15398 846 aa10.84□□□□□ -0.67
CLIP1-206ENST00000535290 CCL15Q16663 113 aa10.84□□□□□ -0.67
CLIP1-206ENST00000535290 NKX2-3Q8TAU0 364 aa10.84□□□□□ -0.67
CLIP1-206ENST00000535290 MTMR10Q9NXD2 777 aa10.84□□□□□ -0.67
CLIP1-206ENST00000535290 PPP2R3BQ9Y5P8 575 aa10.84□□□□□ -0.67
CLIP1-206ENST00000535290 COL1A1P02452 1464 aaPredicted RBP10.84□□□□□ -0.67
CLIP1-206ENST00000535290 TLR2O60603 784 aa10.83□□□□□ -0.68
CLIP1-206ENST00000535290 FARP2O94887 1054 aaPredicted RBP10.83□□□□□ -0.68
CLIP1-206ENST00000535290 CCL5P13501 91 aa10.83□□□□□ -0.68
CLIP1-206ENST00000535290 KLRK1P26718 216 aa10.83□□□□□ -0.68
CLIP1-206ENST00000535290 CTGFP29279 349 aa10.83□□□□□ -0.68
CLIP1-206ENST00000535290 GTF2IP78347 998 aa10.83□□□□□ -0.68
CLIP1-206ENST00000535290 GPR153Q6NV75 609 aa10.83□□□□□ -0.68
CLIP1-206ENST00000535290 MINPP1Q9UNW1 487 aa10.83□□□□□ -0.68
CLIP1-206ENST00000535290 ZNF804BA4D1E1 1349 aa10.83□□□□□ -0.68
CLIP1-206ENST00000535290 TTC28Q96AY4 2481 aa10.82□□□□□ -0.68
CLIP1-206ENST00000535290 EVI5O60447 810 aa10.82□□□□□ -0.68
CLIP1-206ENST00000535290 GNRH1P01148 92 aa10.82□□□□□ -0.68
CLIP1-206ENST00000535290 CCT4P50991 539 aaKnown RBP10.82□□□□□ -0.68
CLIP1-206ENST00000535290 GTF2A2P52657 109 aa10.82□□□□□ -0.68
CLIP1-206ENST00000535290 RASA3Q14644 834 aa10.82□□□□□ -0.68
CLIP1-206ENST00000535290 KIF22Q14807 665 aa10.82□□□□□ -0.68
CLIP1-206ENST00000535290 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.82□□□□□ -0.68
CLIP1-206ENST00000535290 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.82□□□□□ -0.68
CLIP1-206ENST00000535290 CERS5Q8N5B7 392 aa10.82□□□□□ -0.68
CLIP1-206ENST00000535290 MTMR14Q8NCE2 650 aa10.82□□□□□ -0.68
CLIP1-206ENST00000535290 PRMT6Q96LA8 375 aaPredicted RBP10.82□□□□□ -0.68
CLIP1-206ENST00000535290 RNF208Q9H0X6 261 aa10.82□□□□□ -0.68
CLIP1-206ENST00000535290 VEZTQ9HBM0 779 aa10.82□□□□□ -0.68
CLIP1-206ENST00000535290 PDE8AO60658 829 aa10.81□□□□□ -0.68
CLIP1-206ENST00000535290 GRK4P32298 578 aa10.81□□□□□ -0.68
CLIP1-206ENST00000535290 PRMT2P55345 433 aa10.81□□□□□ -0.68
CLIP1-206ENST00000535290 CDAN1Q8IWY9 1227 aa10.81□□□□□ -0.68
CLIP1-206ENST00000535290 U2AF1L4Q8WU68 220 aaKnown RBP10.81□□□□□ -0.68
CLIP1-206ENST00000535290 TRIM47Q96LD4 638 aa10.81□□□□□ -0.68
CLIP1-206ENST00000535290 BABAM1Q9NWV8 329 aa10.81□□□□□ -0.68
CLIP1-206ENST00000535290 SRRDQ9UH36 339 aa10.81□□□□□ -0.68
CLIP1-206ENST00000535290 RIPOR2Q9Y4F9 1068 aa10.81□□□□□ -0.68
CLIP1-206ENST00000535290 ZSWIM8A7E2V4 1837 aa10.8□□□□□ -0.68
CLIP1-206ENST00000535290 SPDYE2BA6NHP3 402 aa10.8□□□□□ -0.68
CLIP1-206ENST00000535290 F8W031 263 aaPredicted RBP10.8□□□□□ -0.68
CLIP1-206ENST00000535290 PCCAP05165 728 aaPredicted RBP10.8□□□□□ -0.68
CLIP1-206ENST00000535290 SPDYE6P0CI01 402 aa10.8□□□□□ -0.68
CLIP1-206ENST00000535290 HSP90B1P14625 803 aaKnown RBP10.8□□□□□ -0.68
CLIP1-206ENST00000535290 PSMC4P43686 418 aa10.8□□□□□ -0.68
CLIP1-206ENST00000535290 VGLL4Q14135 290 aa10.8□□□□□ -0.68
CLIP1-206ENST00000535290 CFAP100Q494V2 611 aa10.8□□□□□ -0.68
CLIP1-206ENST00000535290 HDGFL1Q5TGJ6 251 aa10.8□□□□□ -0.68
CLIP1-206ENST00000535290 RAET1EQ8TD07 263 aa10.8□□□□□ -0.68
CLIP1-206ENST00000535290 GDF15Q99988 308 aa10.8□□□□□ -0.68
CLIP1-206ENST00000535290 BSDC1Q9NW68 430 aaPredicted RBP10.8□□□□□ -0.68
CLIP1-206ENST00000535290 UNC80Q8N2C7 3258 aa10.8□□□□□ -0.68
CLIP1-206ENST00000535290 LAMB1P07942 1786 aa10.8□□□□□ -0.68
CLIP1-206ENST00000535290 DLG5Q8TDM6 1919 aa10.8□□□□□ -0.68
CLIP1-206ENST00000535290 BTBD19C9JJ37 291 aa10.79□□□□□ -0.68
CLIP1-206ENST00000535290 MYO1BO43795 1136 aa10.79□□□□□ -0.68
CLIP1-206ENST00000535290 OSBPP22059 807 aa10.79□□□□□ -0.68
CLIP1-206ENST00000535290 BMP8BP34820 402 aa10.79□□□□□ -0.68
CLIP1-206ENST00000535290 C17orf99Q6UX52 265 aa10.79□□□□□ -0.68
CLIP1-206ENST00000535290 CDC5LQ99459 802 aaKnown RBP10.79□□□□□ -0.68
CLIP1-206ENST00000535290 UNC93B1Q9H1C4 597 aa10.79□□□□□ -0.68
CLIP1-206ENST00000535290 PRDM6Q9NQX0 595 aa10.79□□□□□ -0.68
CLIP1-206ENST00000535290 DBF4Q9UBU7 674 aaPredicted RBP10.79□□□□□ -0.68
CLIP1-206ENST00000535290 BIN2Q9UBW5 565 aaPredicted RBP10.79□□□□□ -0.68
CLIP1-206ENST00000535290 ZNF646O15015 1829 aaPredicted RBP10.79□□□□□ -0.68
CLIP1-206ENST00000535290 WDHD1O75717 1129 aaPredicted RBP10.78□□□□□ -0.68
CLIP1-206ENST00000535290 SGPL1O95470 568 aa10.78□□□□□ -0.68
CLIP1-206ENST00000535290 BCAMP50895 628 aa10.78□□□□□ -0.68
CLIP1-206ENST00000535290 RIPK4P57078 832 aa10.78□□□□□ -0.68
CLIP1-206ENST00000535290 MAP3K9P80192 1104 aa10.78□□□□□ -0.68
CLIP1-206ENST00000535290 LRIT3Q3SXY7 679 aa10.78□□□□□ -0.68
CLIP1-206ENST00000535290 RIC3Q7Z5B4 369 aa10.78□□□□□ -0.68
CLIP1-206ENST00000535290 TEPSINQ96N21 525 aa10.78□□□□□ -0.68
CLIP1-206ENST00000535290 MYD88Q99836 296 aa10.78□□□□□ -0.68
CLIP1-206ENST00000535290 GREM2Q9H772 168 aa10.78□□□□□ -0.68
CLIP1-206ENST00000535290 HYPKQ9NX55 129 aa10.78□□□□□ -0.68
CLIP1-206ENST00000535290 CPA4Q9UI42 421 aa10.78□□□□□ -0.68
CLIP1-206ENST00000535290 LEMD3Q9Y2U8 911 aa10.78□□□□□ -0.68
CLIP1-206ENST00000535290 VCANP13611 3396 aa10.78□□□□□ -0.68
CLIP1-206ENST00000535290 MAPK8IP3Q9UPT6 1336 aa10.78□□□□□ -0.68
CLIP1-206ENST00000535290 CHL1O00533 1208 aa10.77□□□□□ -0.69
CLIP1-206ENST00000535290 FMNL1O95466 1100 aaPredicted RBP10.77□□□□□ -0.69
CLIP1-206ENST00000535290 CETPP11597 493 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms