RNA–Protein interactions for RNA: ENST00000535147.5

DDB1-204, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,789 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-204ENST00000535147 NPHP1O15259 732 aa11.96□□□□□ -0.49
DDB1-204ENST00000535147 NEMFO60524 1076 aa11.96□□□□□ -0.49
DDB1-204ENST00000535147 SF3A1Q15459 793 aaKnown RBP11.96□□□□□ -0.49
DDB1-204ENST00000535147 CHRNA2Q15822 529 aa11.96□□□□□ -0.49
DDB1-204ENST00000535147 NBPF14Q5TI25 921 aa11.96□□□□□ -0.49
DDB1-204ENST00000535147 NBPF10Q6P3W6 841 aaKnown RBP11.96□□□□□ -0.49
DDB1-204ENST00000535147 NBPF15Q8N660 670 aa11.96□□□□□ -0.49
DDB1-204ENST00000535147 ZNF274Q96GC6 653 aaPredicted RBP11.96□□□□□ -0.49
DDB1-204ENST00000535147 ADAMTS7Q9UKP4 1686 aa11.96□□□□□ -0.49
DDB1-204ENST00000535147 AFDNP55196 1824 aaKnown RBP11.96□□□□□ -0.49
DDB1-204ENST00000535147 RNF113AO15541 343 aaKnown RBP11.96□□□□□ -0.49
DDB1-204ENST00000535147 BRD2P25440 801 aaKnown RBP11.96□□□□□ -0.49
DDB1-204ENST00000535147 STK38Q15208 465 aa11.96□□□□□ -0.49
DDB1-204ENST00000535147 ISM2Q6H9L7 571 aa11.96□□□□□ -0.49
DDB1-204ENST00000535147 OGFRQ9NZT2 677 aa11.96□□□□□ -0.49
DDB1-204ENST00000535147 H7C1W4 665 aa11.96□□□□□ -0.5
DDB1-204ENST00000535147 CABP4P57796 275 aa11.96□□□□□ -0.5
DDB1-204ENST00000535147 ADALQ6DHV7 355 aa11.96□□□□□ -0.5
DDB1-204ENST00000535147 LINC00301Q8NCQ3 95 aa11.96□□□□□ -0.5
DDB1-204ENST00000535147 XPO4Q9C0E2 1151 aaKnown RBP11.96□□□□□ -0.5
DDB1-204ENST00000535147 ZBTB3Q9H5J0 574 aa11.96□□□□□ -0.5
DDB1-204ENST00000535147 RTEL1Q9NZ71 1219 aa11.96□□□□□ -0.5
DDB1-204ENST00000535147 CGNQ9P2M7 1197 aaKnown RBP11.96□□□□□ -0.5
DDB1-204ENST00000535147 SMC2O95347 1197 aa11.95□□□□□ -0.5
DDB1-204ENST00000535147 KMT5BQ4FZB7 885 aa11.95□□□□□ -0.5
DDB1-204ENST00000535147 IFNKQ9P0W0 207 aa11.95□□□□□ -0.5
DDB1-204ENST00000535147 KIAA1468Q9P260 1216 aa11.95□□□□□ -0.5
DDB1-204ENST00000535147 DDX41Q9UJV9 622 aaKnown RBP11.95□□□□□ -0.5
DDB1-204ENST00000535147 FOXP2O15409 715 aa11.95□□□□□ -0.5
DDB1-204ENST00000535147 ELF2Q15723 593 aa11.95□□□□□ -0.5
DDB1-204ENST00000535147 WASHC4Q2M389 1173 aa11.95□□□□□ -0.5
DDB1-204ENST00000535147 ATL3Q6DD88 541 aa11.95□□□□□ -0.5
DDB1-204ENST00000535147 DCAF5Q96JK2 942 aa11.95□□□□□ -0.5
DDB1-204ENST00000535147 C8orf76Q96K31 380 aa11.95□□□□□ -0.5
DDB1-204ENST00000535147 CCDC85AQ96PX6 553 aaPredicted RBP11.95□□□□□ -0.5
DDB1-204ENST00000535147 NAT10Q9H0A0 1025 aaKnown RBP11.95□□□□□ -0.5
DDB1-204ENST00000535147 MYH15Q9Y2K3 1946 aa11.94□□□□□ -0.5
DDB1-204ENST00000535147 SCN11AQ9UI33 1791 aa11.94□□□□□ -0.5
DDB1-204ENST00000535147 NEDD4P46934 1319 aa11.94□□□□□ -0.5
DDB1-204ENST00000535147 KLF18A0A0U1RQI7 1052 aa11.94□□□□□ -0.5
DDB1-204ENST00000535147 EYA2O00167 538 aa11.94□□□□□ -0.5
DDB1-204ENST00000535147 A1BGP04217 495 aa11.94□□□□□ -0.5
DDB1-204ENST00000535147 IL15P40933 162 aaPredicted RBP11.94□□□□□ -0.5
DDB1-204ENST00000535147 ZRSR1Q15695 479 aaKnown RBP11.94□□□□□ -0.5
DDB1-204ENST00000535147 TMC6Q7Z403 805 aa11.94□□□□□ -0.5
DDB1-204ENST00000535147 CAMTA1Q9Y6Y1 1673 aa11.94□□□□□ -0.5
DDB1-204ENST00000535147 KIF28PB7ZC32 967 aa11.94□□□□□ -0.5
DDB1-204ENST00000535147 ADORA1P30542 326 aa11.94□□□□□ -0.5
DDB1-204ENST00000535147 E4F1Q66K89 784 aaPredicted RBP11.94□□□□□ -0.5
DDB1-204ENST00000535147 ARMCX5Q6P1M9 558 aa11.94□□□□□ -0.5
DDB1-204ENST00000535147 KIF18AQ8NI77 898 aa11.94□□□□□ -0.5
DDB1-204ENST00000535147 CWC25Q9NXE8 425 aaPredicted RBP11.94□□□□□ -0.5
DDB1-204ENST00000535147 ORC3Q9UBD5 711 aaPredicted RBP11.94□□□□□ -0.5
DDB1-204ENST00000535147 GOLGA8BA8MQT2 603 aa11.93□□□□□ -0.5
DDB1-204ENST00000535147 SPTLC2O15270 562 aa11.93□□□□□ -0.5
DDB1-204ENST00000535147 PRC1O43663 620 aa11.93□□□□□ -0.5
DDB1-204ENST00000535147 PI16Q6UXB8 463 aa11.93□□□□□ -0.5
DDB1-204ENST00000535147 HPS5Q9UPZ3 1129 aa11.93□□□□□ -0.5
DDB1-204ENST00000535147 A0A1W2PQ27 194 aa11.93□□□□□ -0.5
DDB1-204ENST00000535147 A0A1W2PQ64 194 aa11.93□□□□□ -0.5
DDB1-204ENST00000535147 A0A1W2PQD8 194 aa11.93□□□□□ -0.5
DDB1-204ENST00000535147 FGAP02671 866 aa11.93□□□□□ -0.5
DDB1-204ENST00000535147 SLC3A2P08195 630 aaKnown RBP11.93□□□□□ -0.5
DDB1-204ENST00000535147 LMOD1P29536 600 aaPredicted RBP11.93□□□□□ -0.5
DDB1-204ENST00000535147 MARCKSP29966 332 aaPredicted RBP11.93□□□□□ -0.5
DDB1-204ENST00000535147 SCARF1Q14162 830 aa11.93□□□□□ -0.5
DDB1-204ENST00000535147 MYSM1Q5VVJ2 828 aa11.93□□□□□ -0.5
DDB1-204ENST00000535147 FBXO38Q6PIJ6 1188 aa11.93□□□□□ -0.5
DDB1-204ENST00000535147 FBXO18Q8NFZ0 1043 aa11.93□□□□□ -0.5
DDB1-204ENST00000535147 AIFM3Q96NN9 605 aa11.93□□□□□ -0.5
DDB1-204ENST00000535147 DENND2AQ9ULE3 1009 aa11.93□□□□□ -0.5
DDB1-204ENST00000535147 ARFGEF2Q9Y6D5 1785 aa11.93□□□□□ -0.5
DDB1-204ENST00000535147 ZNF202O95125 648 aa11.92□□□□□ -0.5
DDB1-204ENST00000535147 GSDMDP57764 484 aa11.92□□□□□ -0.5
DDB1-204ENST00000535147 LRRN4CLQ8ND94 238 aa11.92□□□□□ -0.5
DDB1-204ENST00000535147 OSBPL5Q9H0X9 879 aaPredicted RBP11.92□□□□□ -0.5
DDB1-204ENST00000535147 ANTXR2P58335 489 aa11.92□□□□□ -0.5
DDB1-204ENST00000535147 PTPN21Q16825 1174 aa11.92□□□□□ -0.5
DDB1-204ENST00000535147 GORABQ5T7V8 394 aa11.92□□□□□ -0.5
DDB1-204ENST00000535147 PUS7LQ9H0K6 701 aaKnown RBP11.92□□□□□ -0.5
DDB1-204ENST00000535147 GPR108Q9NPR9 543 aa11.92□□□□□ -0.5
DDB1-204ENST00000535147 CPLX1O14810 134 aa11.91□□□□□ -0.5
DDB1-204ENST00000535147 ATP1A3P13637 1013 aa11.91□□□□□ -0.5
DDB1-204ENST00000535147 EVCP57679 992 aa11.91□□□□□ -0.5
DDB1-204ENST00000535147 IMMTQ16891 758 aaKnown RBP11.91□□□□□ -0.5
DDB1-204ENST00000535147 SYT10Q6XYQ8 523 aa11.91□□□□□ -0.5
DDB1-204ENST00000535147 SYNE3Q6ZMZ3 975 aa11.91□□□□□ -0.5
DDB1-204ENST00000535147 ZNF397Q8NF99 534 aaPredicted RBP11.91□□□□□ -0.5
DDB1-204ENST00000535147 KCNG4Q8TDN1 519 aa11.91□□□□□ -0.5
DDB1-204ENST00000535147 POLR3EQ9NVU0 708 aa11.91□□□□□ -0.5
DDB1-204ENST00000535147 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.91□□□□□ -0.5
DDB1-204ENST00000535147 MROH7-TTC4A0A0A0MT08 1334 aa11.91□□□□□ -0.5
DDB1-204ENST00000535147 WDHD1O75717 1129 aaPredicted RBP11.91□□□□□ -0.5
DDB1-204ENST00000535147 PFKFB1P16118 471 aa11.91□□□□□ -0.5
DDB1-204ENST00000535147 RXRAP19793 462 aa11.91□□□□□ -0.5
DDB1-204ENST00000535147 NCAPHQ15003 741 aa11.91□□□□□ -0.5
DDB1-204ENST00000535147 TAF7LQ5H9L4 462 aa11.91□□□□□ -0.5
DDB1-204ENST00000535147 PROSER2Q86WR7 435 aaPredicted RBP11.91□□□□□ -0.5
DDB1-204ENST00000535147 NKX2-3Q8TAU0 364 aa11.91□□□□□ -0.5
DDB1-204ENST00000535147 ERO1AQ96HE7 468 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms