RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 CITED4Q96RK1 184 aa7.08□□□□□ -1.28
ECHDC1-223ENST00000534442 TSEN34Q9BSV6 310 aaKnown RBP7.08□□□□□ -1.28
ECHDC1-223ENST00000534442 COL25A1Q9BXS0 654 aaPredicted RBP7.08□□□□□ -1.28
ECHDC1-223ENST00000534442 PRDM6Q9NQX0 595 aa7.08□□□□□ -1.28
ECHDC1-223ENST00000534442 PXDNLA1KZ92 1463 aa7.08□□□□□ -1.28
ECHDC1-223ENST00000534442 C10orf71Q711Q0 1435 aa7.08□□□□□ -1.28
ECHDC1-223ENST00000534442 PKD1L2Q7Z442 2459 aa7.07□□□□□ -1.28
ECHDC1-223ENST00000534442 CTSOP43234 321 aaPredicted RBP7.07□□□□□ -1.28
ECHDC1-223ENST00000534442 FMR1Q06787 632 aaKnown RBP eCLIP7.07□□□□□ -1.28
ECHDC1-223ENST00000534442 AAMPQ13685 434 aa7.07□□□□□ -1.28
ECHDC1-223ENST00000534442 IDI1Q13907 227 aa7.07□□□□□ -1.28
ECHDC1-223ENST00000534442 SLC27A3Q5K4L6 730 aa7.07□□□□□ -1.28
ECHDC1-223ENST00000534442 FAM129BQ96TA1 746 aa7.07□□□□□ -1.28
ECHDC1-223ENST00000534442 BCS1LQ9Y276 419 aa7.07□□□□□ -1.28
ECHDC1-223ENST00000534442 ZFYVE9O95405 1425 aa7.07□□□□□ -1.28
ECHDC1-223ENST00000534442 COL24A1Q17RW2 1714 aa7.07□□□□□ -1.28
ECHDC1-223ENST00000534442 CNTNAP1P78357 1384 aa7.07□□□□□ -1.28
ECHDC1-223ENST00000534442 PLEKHH2Q8IVE3 1493 aa7.06□□□□□ -1.28
ECHDC1-223ENST00000534442 GPR182O15218 404 aa7.06□□□□□ -1.28
ECHDC1-223ENST00000534442 PLA2G4AP47712 749 aa7.06□□□□□ -1.28
ECHDC1-223ENST00000534442 EAPPQ56P03 285 aaPredicted RBP7.06□□□□□ -1.28
ECHDC1-223ENST00000534442 GNASQ5JWF2 1037 aa7.06□□□□□ -1.28
ECHDC1-223ENST00000534442 LINC00528Q8N1L1 170 aa7.06□□□□□ -1.28
ECHDC1-223ENST00000534442 POLIQ9UNA4 740 aa7.06□□□□□ -1.28
ECHDC1-223ENST00000534442 XRN1Q8IZH2 1706 aaKnown RBP7.06□□□□□ -1.28
ECHDC1-223ENST00000534442 LMTK2Q8IWU2 1503 aa7.06□□□□□ -1.28
ECHDC1-223ENST00000534442 SPATA31C2B4DYI2 1134 aa7.05□□□□□ -1.28
ECHDC1-223ENST00000534442 CAPN5O15484 640 aaPredicted RBP7.05□□□□□ -1.28
ECHDC1-223ENST00000534442 GTF2E1P29083 439 aaPredicted RBP7.05□□□□□ -1.28
ECHDC1-223ENST00000534442 ZAP70P43403 619 aa7.05□□□□□ -1.28
ECHDC1-223ENST00000534442 TXNRD1Q16881 649 aa7.05□□□□□ -1.28
ECHDC1-223ENST00000534442 PTF1AQ7RTS3 328 aa7.05□□□□□ -1.28
ECHDC1-223ENST00000534442 GJD3Q8N144 294 aa7.05□□□□□ -1.28
ECHDC1-223ENST00000534442 TMC1Q8TDI8 760 aa7.05□□□□□ -1.28
ECHDC1-223ENST00000534442 RRAGCQ9HB90 399 aa7.05□□□□□ -1.28
ECHDC1-223ENST00000534442 POLMQ9NP87 494 aaPredicted RBP7.05□□□□□ -1.28
ECHDC1-223ENST00000534442 RAPGEFL1Q9UHV5 662 aa7.05□□□□□ -1.28
ECHDC1-223ENST00000534442 KCPQ6ZWJ8 1503 aa7.05□□□□□ -1.28
ECHDC1-223ENST00000534442 VCANP13611 3396 aa7.05□□□□□ -1.28
ECHDC1-223ENST00000534442 PDGFAP04085 211 aa7.04□□□□□ -1.28
ECHDC1-223ENST00000534442 VAMP1P23763 118 aa7.04□□□□□ -1.28
ECHDC1-223ENST00000534442 MZF1P28698 734 aaPredicted RBP7.04□□□□□ -1.28
ECHDC1-223ENST00000534442 PHKA2P46019 1235 aa7.04□□□□□ -1.28
ECHDC1-223ENST00000534442 PLCB3Q01970 1234 aa7.04□□□□□ -1.28
ECHDC1-223ENST00000534442 TREML1Q86YW5 311 aa7.04□□□□□ -1.28
ECHDC1-223ENST00000534442 EDEM1Q92611 657 aa7.04□□□□□ -1.28
ECHDC1-223ENST00000534442 FAM122AQ96E09 287 aa7.04□□□□□ -1.28
ECHDC1-223ENST00000534442 DMRTB1Q96MA1 342 aa7.04□□□□□ -1.28
ECHDC1-223ENST00000534442 SPATA31A3Q5VYP0 1347 aa7.03□□□□□ -1.28
ECHDC1-223ENST00000534442 RIMS2Q9UQ26 1411 aa7.03□□□□□ -1.28
ECHDC1-223ENST00000534442 VEGFBP49765 207 aa7.03□□□□□ -1.28
ECHDC1-223ENST00000534442 DNM1Q05193 864 aaKnown RBP7.03□□□□□ -1.28
ECHDC1-223ENST00000534442 EHHADHQ08426 723 aa7.03□□□□□ -1.28
ECHDC1-223ENST00000534442 POU4F2Q12837 409 aa7.03□□□□□ -1.28
ECHDC1-223ENST00000534442 ZDHHC3Q9NYG2 299 aa7.03□□□□□ -1.28
ECHDC1-223ENST00000534442 SPATA31A1Q5TZJ5 1347 aa7.02□□□□□ -1.28
ECHDC1-223ENST00000534442 RRBP1Q9P2E9 1410 aaKnown RBP7.02□□□□□ -1.29
ECHDC1-223ENST00000534442 DUOX2Q9NRD8 1548 aa7.02□□□□□ -1.29
ECHDC1-223ENST00000534442 LRRIQ1Q96JM4 1722 aa7.02□□□□□ -1.29
ECHDC1-223ENST00000534442 VIRMAQ69YN4 1812 aaKnown RBP7.02□□□□□ -1.29
ECHDC1-223ENST00000534442 OPLAHO14841 1288 aa7.02□□□□□ -1.29
ECHDC1-223ENST00000534442 MICAL2O94851 1124 aa7.02□□□□□ -1.29
ECHDC1-223ENST00000534442 NBPF10Q6P3W6 841 aaKnown RBP7.02□□□□□ -1.29
ECHDC1-223ENST00000534442 ZNF280CQ8ND82 737 aa7.02□□□□□ -1.29
ECHDC1-223ENST00000534442 RNF217Q8TC41 542 aa7.02□□□□□ -1.29
ECHDC1-223ENST00000534442 RHPN1Q8TCX5 695 aa7.02□□□□□ -1.29
ECHDC1-223ENST00000534442 GPR152Q8TDT2 470 aa7.02□□□□□ -1.29
ECHDC1-223ENST00000534442 ALKBH8Q96BT7 664 aaKnown RBP7.02□□□□□ -1.29
ECHDC1-223ENST00000534442 NIF3L1Q9GZT8 377 aa7.02□□□□□ -1.29
ECHDC1-223ENST00000534442 DMGDHQ9UI17 866 aaKnown RBP7.02□□□□□ -1.29
ECHDC1-223ENST00000534442 MTUS2Q5JR59 1369 aa7.02□□□□□ -1.29
ECHDC1-223ENST00000534442 TNRC6CQ9HCJ0 1690 aaKnown RBP7.02□□□□□ -1.29
ECHDC1-223ENST00000534442 SPTBN5Q9NRC6 3674 aaKnown RBP7.02□□□□□ -1.29
ECHDC1-223ENST00000534442 KDM2BQ8NHM5 1336 aa7.01□□□□□ -1.29
ECHDC1-223ENST00000534442 TECPR2O15040 1411 aa7.01□□□□□ -1.29
ECHDC1-223ENST00000534442 ARHGAP31Q2M1Z3 1444 aa7.01□□□□□ -1.29
ECHDC1-223ENST00000534442 BMP2P12643 396 aa7.01□□□□□ -1.29
ECHDC1-223ENST00000534442 ATP4AP20648 1035 aa7.01□□□□□ -1.29
ECHDC1-223ENST00000534442 NBPF1Q3BBV0 1214 aa7.01□□□□□ -1.29
ECHDC1-223ENST00000534442 C6orf118Q5T5N4 469 aa7.01□□□□□ -1.29
ECHDC1-223ENST00000534442 PRICKLE2Q7Z3G6 844 aa7.01□□□□□ -1.29
ECHDC1-223ENST00000534442 SLC16A10Q8TF71 515 aa7.01□□□□□ -1.29
ECHDC1-223ENST00000534442 SUSD3Q96L08 255 aa7.01□□□□□ -1.29
ECHDC1-223ENST00000534442 SETDB2Q96T68 719 aa7.01□□□□□ -1.29
ECHDC1-223ENST00000534442 GGNBP2Q9H3C7 697 aa7.01□□□□□ -1.29
ECHDC1-223ENST00000534442 RNF19AQ9NV58 838 aa7.01□□□□□ -1.29
ECHDC1-223ENST00000534442 SBF2Q86WG5 1849 aa7□□□□□ -1.29
ECHDC1-223ENST00000534442 TGFBR3LH3BV60 316 aa7□□□□□ -1.29
ECHDC1-223ENST00000534442 UPP2O95045 317 aa7□□□□□ -1.29
ECHDC1-223ENST00000534442 RECKO95980 971 aa7□□□□□ -1.29
ECHDC1-223ENST00000534442 MAPK8P45983 427 aa7□□□□□ -1.29
ECHDC1-223ENST00000534442 ZNF827Q17R98 1081 aa7□□□□□ -1.29
ECHDC1-223ENST00000534442 WDR44Q5JSH3 913 aa7□□□□□ -1.29
ECHDC1-223ENST00000534442 MRPL14Q6P1L8 145 aaKnown RBP7□□□□□ -1.29
ECHDC1-223ENST00000534442 NUDT16Q96DE0 195 aaKnown RBP7□□□□□ -1.29
ECHDC1-223ENST00000534442 HSH2DQ96JZ2 352 aa7□□□□□ -1.29
ECHDC1-223ENST00000534442 PDZRN3Q9UPQ7 1066 aa7□□□□□ -1.29
ECHDC1-223ENST00000534442 PAPPAQ13219 1627 aa7□□□□□ -1.29
ECHDC1-223ENST00000534442 COL14A1Q05707 1796 aaKnown RBP7□□□□□ -1.29
ECHDC1-223ENST00000534442 PRXQ9BXM0 1461 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms