RNA–Protein interactions for RNA: ENST00000534315.5

FOXRED1-218, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 1 (best)

Gene FOXRED1, Length 2,210 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-218ENST00000534315 DDX11Q96FC9 970 aa16.11■□□□□ 0.17
FOXRED1-218ENST00000534315 WWC3Q9ULE0 1092 aa16.11■□□□□ 0.17
FOXRED1-218ENST00000534315 PDE6AP16499 860 aa16.11■□□□□ 0.17
FOXRED1-218ENST00000534315 IGHMBP2P38935 993 aaKnown RBP16.11■□□□□ 0.17
FOXRED1-218ENST00000534315 UBE3CQ15386 1083 aa16.11■□□□□ 0.17
FOXRED1-218ENST00000534315 SMARCC2Q8TAQ2 1214 aa16.11■□□□□ 0.17
FOXRED1-218ENST00000534315 ZNF532Q9HCE3 1301 aa16.11■□□□□ 0.17
FOXRED1-218ENST00000534315 COL4A1P02462 1669 aa16.1■□□□□ 0.17
FOXRED1-218ENST00000534315 KRT85P78386 507 aa16.1■□□□□ 0.17
FOXRED1-218ENST00000534315 CLEC4GQ6UXB4 293 aa16.1■□□□□ 0.17
FOXRED1-218ENST00000534315 NSUN7Q8NE18 718 aaKnown RBP16.1■□□□□ 0.17
FOXRED1-218ENST00000534315 LLPHQ9BRT6 129 aaKnown RBP16.1■□□□□ 0.17
FOXRED1-218ENST00000534315 PHF14O94880 888 aa16.1■□□□□ 0.17
FOXRED1-218ENST00000534315 CTDNEP1O95476 244 aa16.1■□□□□ 0.17
FOXRED1-218ENST00000534315 CCT2P78371 535 aaKnown RBP16.1■□□□□ 0.17
FOXRED1-218ENST00000534315 CCDC173Q0VFZ6 552 aa16.1■□□□□ 0.17
FOXRED1-218ENST00000534315 RASGRF1Q13972 1273 aa16.1■□□□□ 0.17
FOXRED1-218ENST00000534315 CCDC183Q5T5S1 534 aa16.1■□□□□ 0.17
FOXRED1-218ENST00000534315 SPATA5Q8NB90 893 aa16.1■□□□□ 0.17
FOXRED1-218ENST00000534315 NAP1L2Q9ULW6 460 aaPredicted RBP16.1■□□□□ 0.17
FOXRED1-218ENST00000534315 TCRBV5S4A2TA0A5A2 114 aa16.09■□□□□ 0.17
FOXRED1-218ENST00000534315 SMIM5Q71RC9 77 aa16.09■□□□□ 0.17
FOXRED1-218ENST00000534315 TTC6Q86TZ1 520 aa16.09■□□□□ 0.17
FOXRED1-218ENST00000534315 ANP32BQ92688 251 aaKnown RBP16.09■□□□□ 0.17
FOXRED1-218ENST00000534315 NCOA5Q9HCD5 579 aaKnown RBP16.09■□□□□ 0.17
FOXRED1-218ENST00000534315 RRAGDQ9NQL2 400 aaPredicted RBP16.09■□□□□ 0.17
FOXRED1-218ENST00000534315 GPHNQ9NQX3 736 aaPredicted RBP16.09■□□□□ 0.17
FOXRED1-218ENST00000534315 DOCK2Q92608 1830 aa16.09■□□□□ 0.17
FOXRED1-218ENST00000534315 PTPDC1A2A3K4 754 aa16.09■□□□□ 0.17
FOXRED1-218ENST00000534315 PDIA3P30101 505 aaKnown RBP16.09■□□□□ 0.17
FOXRED1-218ENST00000534315 ERFEQ4G0M1 354 aa16.09■□□□□ 0.17
FOXRED1-218ENST00000534315 MB21D2Q8IYB1 491 aaPredicted RBP16.09■□□□□ 0.17
FOXRED1-218ENST00000534315 FNBP4Q8N3X1 1017 aaPredicted RBP16.09■□□□□ 0.17
FOXRED1-218ENST00000534315 FBXL16Q8N461 479 aa16.09■□□□□ 0.17
FOXRED1-218ENST00000534315 FAM184AQ8NB25 1140 aa16.09■□□□□ 0.17
FOXRED1-218ENST00000534315 ZNF274Q96GC6 653 aaPredicted RBP16.09■□□□□ 0.17
FOXRED1-218ENST00000534315 PPP1R9BQ96SB3 815 aa16.09■□□□□ 0.17
FOXRED1-218ENST00000534315 TSPY26PQ9H489 355 aa16.09■□□□□ 0.17
FOXRED1-218ENST00000534315 CNTNAP4Q9C0A0 1308 aa16.08■□□□□ 0.17
FOXRED1-218ENST00000534315 ZNF213O14771 459 aa16.08■□□□□ 0.16
FOXRED1-218ENST00000534315 CHRNDQ07001 517 aa16.08■□□□□ 0.16
FOXRED1-218ENST00000534315 H3BQV1 296 aa16.07■□□□□ 0.16
FOXRED1-218ENST00000534315 PRC1O43663 620 aa16.07■□□□□ 0.16
FOXRED1-218ENST00000534315 RESTQ13127 1097 aa16.07■□□□□ 0.16
FOXRED1-218ENST00000534315 IFFO2Q5TF58 517 aa16.07■□□□□ 0.16
FOXRED1-218ENST00000534315 C3orf67Q6ZVT6 689 aa16.07■□□□□ 0.16
FOXRED1-218ENST00000534315 NBPF3Q9H094 633 aa16.07■□□□□ 0.16
FOXRED1-218ENST00000534315 SCN7AQ01118 1682 aa16.07■□□□□ 0.16
FOXRED1-218ENST00000534315 MCM5P33992 734 aa16.07■□□□□ 0.16
FOXRED1-218ENST00000534315 BCAMP50895 628 aa16.07■□□□□ 0.16
FOXRED1-218ENST00000534315 HMGN5P82970 282 aaKnown RBP16.07■□□□□ 0.16
FOXRED1-218ENST00000534315 NCOA7Q8NI08 942 aa16.07■□□□□ 0.16
FOXRED1-218ENST00000534315 BTAF1O14981 1849 aa16.07■□□□□ 0.16
FOXRED1-218ENST00000534315 CASZ1Q86V15 1759 aa16.07■□□□□ 0.16
FOXRED1-218ENST00000534315 ELP1O95163 1332 aa16.06■□□□□ 0.16
FOXRED1-218ENST00000534315 SALL1Q9NSC2 1324 aa16.06■□□□□ 0.16
FOXRED1-218ENST00000534315 EVCP57679 992 aa16.06■□□□□ 0.16
FOXRED1-218ENST00000534315 ANTXR2P58335 489 aa16.06■□□□□ 0.16
FOXRED1-218ENST00000534315 BICDL1Q6ZP65 573 aa16.06■□□□□ 0.16
FOXRED1-218ENST00000534315 RALYLQ86SE5 291 aaKnown RBP16.06■□□□□ 0.16
FOXRED1-218ENST00000534315 RNF214Q8ND24 703 aa16.06■□□□□ 0.16
FOXRED1-218ENST00000534315 TRIM44Q96DX7 344 aaPredicted RBP16.06■□□□□ 0.16
FOXRED1-218ENST00000534315 CDC5LQ99459 802 aaKnown RBP16.06■□□□□ 0.16
FOXRED1-218ENST00000534315 TAF1P21675 1872 aa16.06■□□□□ 0.16
FOXRED1-218ENST00000534315 APPP05067 770 aa16.06■□□□□ 0.16
FOXRED1-218ENST00000534315 FOSBP53539 338 aa16.06■□□□□ 0.16
FOXRED1-218ENST00000534315 MAGEB6Q8N7X4 407 aa16.06■□□□□ 0.16
FOXRED1-218ENST00000534315 AIDAQ96BJ3 306 aa16.06■□□□□ 0.16
FOXRED1-218ENST00000534315 TFIP11Q9UBB9 837 aaKnown RBP16.06■□□□□ 0.16
FOXRED1-218ENST00000534315 USP21Q9UK80 565 aa16.06■□□□□ 0.16
FOXRED1-218ENST00000534315 PPFIA3O75145 1194 aa16.05■□□□□ 0.16
FOXRED1-218ENST00000534315 MAP3K12Q12852 859 aa16.05■□□□□ 0.16
FOXRED1-218ENST00000534315 TBC1D9BQ66K14 1250 aa16.05■□□□□ 0.16
FOXRED1-218ENST00000534315 TBC1D10CQ8IV04 446 aa16.05■□□□□ 0.16
FOXRED1-218ENST00000534315 STRBPQ96SI9 672 aaKnown RBP16.05■□□□□ 0.16
FOXRED1-218ENST00000534315 SCAND2PQ9GZW5 306 aaPredicted RBP16.05■□□□□ 0.16
FOXRED1-218ENST00000534315 BCL2L12Q9HB09 334 aa16.05■□□□□ 0.16
FOXRED1-218ENST00000534315 THSD7AQ9UPZ6 1657 aa16.05■□□□□ 0.16
FOXRED1-218ENST00000534315 FAM182BQ5T319 152 aa16.04■□□□□ 0.16
FOXRED1-218ENST00000534315 DENND2AQ9ULE3 1009 aa16.04■□□□□ 0.16
FOXRED1-218ENST00000534315 A0A1B0GUL6 1792 aa16.04■□□□□ 0.16
FOXRED1-218ENST00000534315 SF3B3Q15393 1217 aaKnown RBP16.04■□□□□ 0.16
FOXRED1-218ENST00000534315 NAA16Q6N069 864 aaPredicted RBP16.04■□□□□ 0.16
FOXRED1-218ENST00000534315 ANKRD18AQ8IVF6 992 aa16.04■□□□□ 0.16
FOXRED1-218ENST00000534315 LEO1Q8WVC0 666 aaPredicted RBP16.04■□□□□ 0.16
FOXRED1-218ENST00000534315 SPATA32Q96LK8 384 aa16.04■□□□□ 0.16
FOXRED1-218ENST00000534315 KIF3AQ9Y496 699 aa16.04■□□□□ 0.16
FOXRED1-218ENST00000534315 NHSQ6T4R5 1651 aa16.03■□□□□ 0.16
FOXRED1-218ENST00000534315 KLF18A0A0U1RQI7 1052 aa16.03■□□□□ 0.16
FOXRED1-218ENST00000534315 LETM1O95202 739 aaPredicted RBP16.03■□□□□ 0.16
FOXRED1-218ENST00000534315 MBD4O95243 580 aa16.03■□□□□ 0.16
FOXRED1-218ENST00000534315 NKX2-3Q8TAU0 364 aa16.03■□□□□ 0.16
FOXRED1-218ENST00000534315 ZSCAN16Q9H4T2 348 aaPredicted RBP16.03■□□□□ 0.16
FOXRED1-218ENST00000534315 SRP68Q9UHB9 627 aaKnown RBP16.03■□□□□ 0.16
FOXRED1-218ENST00000534315 WDR19Q8NEZ3 1342 aa16.03■□□□□ 0.16
FOXRED1-218ENST00000534315 TRDNQ13061 729 aa16.03■□□□□ 0.16
FOXRED1-218ENST00000534315 RC3H1Q5TC82 1133 aaKnown RBP16.03■□□□□ 0.16
FOXRED1-218ENST00000534315 MYH15Q9Y2K3 1946 aa16.02■□□□□ 0.16
FOXRED1-218ENST00000534315 GOLGA8BA8MQT2 603 aa16.02■□□□□ 0.16
FOXRED1-218ENST00000534315 RPS6KA4O75676 772 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 202.8 ms