RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 PSMD14O00487 310 aa21.34■■□□□ 1.01
NXF1-216ENST00000533499 MXD3Q9BW11 206 aa21.34■■□□□ 1.01
NXF1-216ENST00000533499 DENND2AQ9ULE3 1009 aa21.34■■□□□ 1.01
NXF1-216ENST00000533499 KDM2BQ8NHM5 1336 aa21.33■■□□□ 1.01
NXF1-216ENST00000533499 RASGRF1Q13972 1273 aa21.33■■□□□ 1.01
NXF1-216ENST00000533499 ZNF526Q8TF50 670 aaPredicted RBP21.33■■□□□ 1.01
NXF1-216ENST00000533499 GTF3C3Q9Y5Q9 886 aa21.33■■□□□ 1.01
NXF1-216ENST00000533499 DDNO94850 711 aaPredicted RBP21.32■■□□□ 1
NXF1-216ENST00000533499 SCARF1Q14162 830 aa21.32■■□□□ 1
NXF1-216ENST00000533499 PI16Q6UXB8 463 aa21.32■■□□□ 1
NXF1-216ENST00000533499 SPATA5Q8NB90 893 aa21.32■■□□□ 1
NXF1-216ENST00000533499 ECHDC1Q9NTX5 307 aa21.32■■□□□ 1
NXF1-216ENST00000533499 ZBTB12Q9Y330 459 aaPredicted RBP21.32■■□□□ 1
NXF1-216ENST00000533499 F8W031 263 aaPredicted RBP21.31■■□□□ 1
NXF1-216ENST00000533499 SEMA3EO15041 775 aa21.31■■□□□ 1
NXF1-216ENST00000533499 MX1P20591 662 aa21.31■■□□□ 1
NXF1-216ENST00000533499 ARID4AP29374 1257 aaPredicted RBP21.31■■□□□ 1
NXF1-216ENST00000533499 STRIP1Q5VSL9 837 aa21.31■■□□□ 1
NXF1-216ENST00000533499 DNAJC2Q99543 621 aaKnown RBP21.31■■□□□ 1
NXF1-216ENST00000533499 BOLA2Q9H3K6 86 aa21.31■■□□□ 1
NXF1-216ENST00000533499 HMG20BQ9P0W2 317 aa21.31■■□□□ 1
NXF1-216ENST00000533499 NDUFB9Q9Y6M9 179 aa21.31■■□□□ 1
NXF1-216ENST00000533499 ZC3H4Q9UPT8 1303 aaKnown RBP21.3■■□□□ 1
NXF1-216ENST00000533499 MCAMP43121 646 aa21.3■■□□□ 1
NXF1-216ENST00000533499 MFSD14BQ5SR56 506 aa21.3■■□□□ 1
NXF1-216ENST00000533499 ABCF2Q9UG63 623 aa21.3■■□□□ 1
NXF1-216ENST00000533499 UTRNP46939 3433 aa21.3■■□□□ 1
NXF1-216ENST00000533499 GMPSP49915 693 aaPredicted RBP21.29■■□□□ 1
NXF1-216ENST00000533499 DACT2Q5SW24 774 aa21.29■■□□□ 1
NXF1-216ENST00000533499 RSBN1LQ6PCB5 846 aaPredicted RBP21.29■■□□□ 1
NXF1-216ENST00000533499 GPC2Q8N158 579 aa21.29■■□□□ 1
NXF1-216ENST00000533499 WDR66Q8TBY9 1149 aa21.29■■□□□ 1
NXF1-216ENST00000533499 FAM205AQ6ZU69 1335 aa21.29■■□□□ 1
NXF1-216ENST00000533499 COL1A1P02452 1464 aaPredicted RBP21.28■■□□□ 1
NXF1-216ENST00000533499 ERC2O15083 957 aa21.28■■□□□ 1
NXF1-216ENST00000533499 VIL1P09327 827 aaKnown RBP21.28■■□□□ 1
NXF1-216ENST00000533499 ZAP70P43403 619 aa21.28■■□□□ 1
NXF1-216ENST00000533499 TBC1D9Q6ZT07 1266 aa21.28■■□□□ 1
NXF1-216ENST00000533499 KIAA0825Q8IV33 1275 aa21.28■■□□□ 1
NXF1-216ENST00000533499 TBC1D22AQ8WUA7 517 aa21.28■■□□□ 1
NXF1-216ENST00000533499 GLTPD2A6NH11 291 aa21.27■■□□□ 1
NXF1-216ENST00000533499 MAP4K4O95819 1239 aaPredicted RBP21.27■■□□□ 1
NXF1-216ENST00000533499 ATP5JP18859 108 aa21.27■■□□□ 1
NXF1-216ENST00000533499 PDE4AP27815 886 aa21.27■■□□□ 1
NXF1-216ENST00000533499 SKAP1Q86WV1 359 aa21.27■■□□□ 1
NXF1-216ENST00000533499 ZNF512BQ96KM6 892 aaPredicted RBP21.27■■□□□ 1
NXF1-216ENST00000533499 TTC41PQ6P2S7 1318 aa21.27■□□□□ 0.99
NXF1-216ENST00000533499 GOLIM4O00461 696 aa21.26■□□□□ 0.99
NXF1-216ENST00000533499 YY1P25490 414 aa21.26■□□□□ 0.99
NXF1-216ENST00000533499 LMOD1P29536 600 aaPredicted RBP21.26■□□□□ 0.99
NXF1-216ENST00000533499 RGS3P49796 1198 aa21.26■□□□□ 0.99
NXF1-216ENST00000533499 PDE1AP54750 535 aa21.26■□□□□ 0.99
NXF1-216ENST00000533499 CERS5Q8N5B7 392 aa21.26■□□□□ 0.99
NXF1-216ENST00000533499 PSME4Q14997 1843 aa21.26■□□□□ 0.99
NXF1-216ENST00000533499 PLEKHM2Q8IWE5 1019 aa21.25■□□□□ 0.99
NXF1-216ENST00000533499 RAI14Q9P0K7 980 aa21.25■□□□□ 0.99
NXF1-216ENST00000533499 LRP2BPQ9P2M1 347 aa21.25■□□□□ 0.99
NXF1-216ENST00000533499 MYO3BQ8WXR4 1341 aa21.25■□□□□ 0.99
NXF1-216ENST00000533499 GLRX3O76003 335 aaKnown RBP21.24■□□□□ 0.99
NXF1-216ENST00000533499 LDHBP07195 334 aaKnown RBP21.24■□□□□ 0.99
NXF1-216ENST00000533499 SCNN1DP51172 638 aa21.24■□□□□ 0.99
NXF1-216ENST00000533499 ZGPATQ8N5A5 531 aaKnown RBP21.24■□□□□ 0.99
NXF1-216ENST00000533499 AGBL3Q8NEM8 1001 aa21.24■□□□□ 0.99
NXF1-216ENST00000533499 EDC3Q96F86 508 aaKnown RBP21.24■□□□□ 0.99
NXF1-216ENST00000533499 TTF2Q9UNY4 1162 aaKnown RBP21.24■□□□□ 0.99
NXF1-216ENST00000533499 AKAP11Q9UKA4 1901 aa21.23■□□□□ 0.99
NXF1-216ENST00000533499 SHTN1A0MZ66 631 aa21.23■□□□□ 0.99
NXF1-216ENST00000533499 CYP2E1P05181 493 aaPredicted RBP21.23■□□□□ 0.99
NXF1-216ENST00000533499 USP17L8P0C7I0 530 aa21.23■□□□□ 0.99
NXF1-216ENST00000533499 RPS12P25398 132 aaKnown RBP21.23■□□□□ 0.99
NXF1-216ENST00000533499 GRIK5Q16478 980 aa21.23■□□□□ 0.99
NXF1-216ENST00000533499 RBM26Q5T8P6 1007 aaKnown RBP21.23■□□□□ 0.99
NXF1-216ENST00000533499 SPTY2D1Q68D10 685 aaPredicted RBP21.23■□□□□ 0.99
NXF1-216ENST00000533499 ERICH6Q7L0X2 663 aa21.23■□□□□ 0.99
NXF1-216ENST00000533499 DZIP1Q86YF9 867 aaKnown RBP21.23■□□□□ 0.99
NXF1-216ENST00000533499 MICALL2Q8IY33 904 aa21.23■□□□□ 0.99
NXF1-216ENST00000533499 OGFOD1Q8N543 542 aa21.23■□□□□ 0.99
NXF1-216ENST00000533499 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.23■□□□□ 0.99
NXF1-216ENST00000533499 HAUS7Q99871 368 aa21.23■□□□□ 0.99
NXF1-216ENST00000533499 ANTXR1Q9H6X2 564 aa21.23■□□□□ 0.99
NXF1-216ENST00000533499 PAG1Q9NWQ8 432 aa21.23■□□□□ 0.99
NXF1-216ENST00000533499 CNOT7Q9UIV1 285 aaKnown RBP21.23■□□□□ 0.99
NXF1-216ENST00000533499 HDAC9Q9UKV0 1011 aa21.23■□□□□ 0.99
NXF1-216ENST00000533499 SALL3Q9BXA9 1300 aa21.23■□□□□ 0.99
NXF1-216ENST00000533499 H7C1D1 291 aa21.22■□□□□ 0.99
NXF1-216ENST00000533499 IDH1O75874 414 aaKnown RBP21.22■□□□□ 0.99
NXF1-216ENST00000533499 PRDX5P30044 214 aa21.22■□□□□ 0.99
NXF1-216ENST00000533499 RBM5P52756 815 aaKnown RBP eCLIP21.22■□□□□ 0.99
NXF1-216ENST00000533499 PI4K2BQ8TCG2 481 aa21.22■□□□□ 0.99
NXF1-216ENST00000533499 RRAGCQ9HB90 399 aa21.22■□□□□ 0.99
NXF1-216ENST00000533499 PIH1D3Q9NQM4 214 aaKnown RBP21.22■□□□□ 0.99
NXF1-216ENST00000533499 STAP2Q9UGK3 403 aa21.22■□□□□ 0.99
NXF1-216ENST00000533499 PDS5AQ29RF7 1337 aaKnown RBP21.22■□□□□ 0.99
NXF1-216ENST00000533499 TRIM6-TRIM34B2RNG4 842 aa21.21■□□□□ 0.99
NXF1-216ENST00000533499 FKBP1AP62942 108 aaKnown RBP21.21■□□□□ 0.99
NXF1-216ENST00000533499 GPRC5DQ9NZD1 345 aa21.21■□□□□ 0.99
NXF1-216ENST00000533499 HACL1Q9UJ83 578 aa21.21■□□□□ 0.99
NXF1-216ENST00000533499 EPS15P42566 896 aa21.2■□□□□ 0.98
NXF1-216ENST00000533499 TTF1Q15361 905 aaPredicted RBP21.2■□□□□ 0.98
NXF1-216ENST00000533499 DPF2Q92785 391 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms