RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 H0YGN5 161 aa10.08□□□□□ -0.8
NXF1-215ENST00000533440 USP2O75604 605 aaPredicted RBP10.08□□□□□ -0.8
NXF1-215ENST00000533440 ZNF853P0CG23 659 aa10.08□□□□□ -0.8
NXF1-215ENST00000533440 KLRK1P26718 216 aa10.08□□□□□ -0.8
NXF1-215ENST00000533440 IREB2P48200 963 aaKnown RBP10.08□□□□□ -0.8
NXF1-215ENST00000533440 SLC9C1Q4G0N8 1177 aa10.08□□□□□ -0.8
NXF1-215ENST00000533440 NBPF12Q5TAG4 269 aaPredicted RBP10.08□□□□□ -0.8
NXF1-215ENST00000533440 CCDC146Q8IYE0 955 aa10.08□□□□□ -0.8
NXF1-215ENST00000533440 ANKRD13AQ8IZ07 590 aa10.08□□□□□ -0.8
NXF1-215ENST00000533440 CERS5Q8N5B7 392 aa10.08□□□□□ -0.8
NXF1-215ENST00000533440 MBIPQ9NS73 344 aa10.08□□□□□ -0.8
NXF1-215ENST00000533440 PTCH2Q9Y6C5 1203 aa10.08□□□□□ -0.8
NXF1-215ENST00000533440 SPEF2Q9C093 1822 aa10.07□□□□□ -0.8
NXF1-215ENST00000533440 MYH3P11055 1940 aa10.07□□□□□ -0.8
NXF1-215ENST00000533440 IGKV5-2P06315 115 aa10.07□□□□□ -0.8
NXF1-215ENST00000533440 ARHGEF6Q15052 776 aa10.07□□□□□ -0.8
NXF1-215ENST00000533440 SLC4A8Q2Y0W8 1093 aa10.07□□□□□ -0.8
NXF1-215ENST00000533440 SAMD1Q6SPF0 538 aaPredicted RBP10.07□□□□□ -0.8
NXF1-215ENST00000533440 RUNDC1Q96C34 613 aa10.07□□□□□ -0.8
NXF1-215ENST00000533440 MS4A4AQ96JQ5 239 aa10.07□□□□□ -0.8
NXF1-215ENST00000533440 ANKRD2Q9GZV1 360 aa10.07□□□□□ -0.8
NXF1-215ENST00000533440 CD209Q9NNX6 404 aa10.07□□□□□ -0.8
NXF1-215ENST00000533440 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.07□□□□□ -0.8
NXF1-215ENST00000533440 PCDHAC2Q9Y5I4 1007 aa10.07□□□□□ -0.8
NXF1-215ENST00000533440 IRS2Q9Y4H2 1338 aa10.07□□□□□ -0.8
NXF1-215ENST00000533440 COL6A3P12111 3177 aa10.06□□□□□ -0.8
NXF1-215ENST00000533440 CLRN2A0PK11 232 aa10.06□□□□□ -0.8
NXF1-215ENST00000533440 SPDYE2BA6NHP3 402 aa10.06□□□□□ -0.8
NXF1-215ENST00000533440 DDX58O95786 925 aaKnown RBP10.06□□□□□ -0.8
NXF1-215ENST00000533440 SPDYE6P0CI01 402 aa10.06□□□□□ -0.8
NXF1-215ENST00000533440 IGHMBP2P38935 993 aaKnown RBP10.06□□□□□ -0.8
NXF1-215ENST00000533440 CFAP100Q494V2 611 aa10.06□□□□□ -0.8
NXF1-215ENST00000533440 OPTNQ96CV9 577 aa10.06□□□□□ -0.8
NXF1-215ENST00000533440 PRMT6Q96LA8 375 aaPredicted RBP10.06□□□□□ -0.8
NXF1-215ENST00000533440 MAP3K2Q9Y2U5 619 aa10.06□□□□□ -0.8
NXF1-215ENST00000533440 A0A0C4DFX4 3053 aa10.06□□□□□ -0.8
NXF1-215ENST00000533440 LAMA3Q16787 3333 aa10.06□□□□□ -0.8
NXF1-215ENST00000533440 AOX1Q06278 1338 aa10.06□□□□□ -0.8
NXF1-215ENST00000533440 OTOFQ9HC10 1997 aa10.05□□□□□ -0.8
NXF1-215ENST00000533440 MYO1BO43795 1136 aa10.05□□□□□ -0.8
NXF1-215ENST00000533440 FKBP1AP62942 108 aaKnown RBP10.05□□□□□ -0.8
NXF1-215ENST00000533440 RASA3Q14644 834 aa10.05□□□□□ -0.8
NXF1-215ENST00000533440 RALBP1Q15311 655 aa10.05□□□□□ -0.8
NXF1-215ENST00000533440 KSR2Q6VAB6 950 aa10.05□□□□□ -0.8
NXF1-215ENST00000533440 CHRDL2Q6WN34 429 aa10.05□□□□□ -0.8
NXF1-215ENST00000533440 C15orf52Q6ZUT6 534 aaKnown RBP10.05□□□□□ -0.8
NXF1-215ENST00000533440 BRI3BPQ8WY22 251 aa10.05□□□□□ -0.8
NXF1-215ENST00000533440 PLA2G12BQ9BX93 195 aa10.05□□□□□ -0.8
NXF1-215ENST00000533440 RNF39Q9H2S5 420 aa10.05□□□□□ -0.8
NXF1-215ENST00000533440 ELP3Q9H9T3 547 aa10.05□□□□□ -0.8
NXF1-215ENST00000533440 ZFYVE28Q9HCC9 887 aa10.05□□□□□ -0.8
NXF1-215ENST00000533440 PI4KAP2A4QPH2 592 aa10.04□□□□□ -0.8
NXF1-215ENST00000533440 H7C1W4 665 aa10.04□□□□□ -0.8
NXF1-215ENST00000533440 ELL2O00472 640 aaPredicted RBP10.04□□□□□ -0.8
NXF1-215ENST00000533440 DLL1O00548 723 aa10.04□□□□□ -0.8
NXF1-215ENST00000533440 CSF1RP07333 972 aa10.04□□□□□ -0.8
NXF1-215ENST00000533440 IL1R1P14778 569 aa10.04□□□□□ -0.8
NXF1-215ENST00000533440 ITGA6P23229 1130 aa10.04□□□□□ -0.8
NXF1-215ENST00000533440 CHRNDQ07001 517 aa10.04□□□□□ -0.8
NXF1-215ENST00000533440 TAF1CQ15572 869 aaPredicted RBP10.04□□□□□ -0.8
NXF1-215ENST00000533440 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.04□□□□□ -0.8
NXF1-215ENST00000533440 PI4KAP1Q8N8J0 262 aa10.04□□□□□ -0.8
NXF1-215ENST00000533440 PRO3102Q9H379 93 aa10.04□□□□□ -0.8
NXF1-215ENST00000533440 VEZTQ9HBM0 779 aa10.04□□□□□ -0.8
NXF1-215ENST00000533440 IFT57Q9NWB7 429 aa10.04□□□□□ -0.8
NXF1-215ENST00000533440 RBM27Q9P2N5 1060 aaKnown RBP10.04□□□□□ -0.8
NXF1-215ENST00000533440 CCL15-CCL14A0A0B4J2E2 113 aa10.03□□□□□ -0.8
NXF1-215ENST00000533440 NEURL1BA8MQ27 555 aa10.03□□□□□ -0.8
NXF1-215ENST00000533440 F8W031 263 aaPredicted RBP10.03□□□□□ -0.8
NXF1-215ENST00000533440 SNAP23O00161 211 aa10.03□□□□□ -0.8
NXF1-215ENST00000533440 ATXN8OSP0DMR3 200 aa10.03□□□□□ -0.8
NXF1-215ENST00000533440 GTF2A2P52657 109 aa10.03□□□□□ -0.8
NXF1-215ENST00000533440 GNAI1P63096 354 aa10.03□□□□□ -0.8
NXF1-215ENST00000533440 CCL15Q16663 113 aa10.03□□□□□ -0.8
NXF1-215ENST00000533440 CWF19L2Q2TBE0 894 aaKnown RBP10.03□□□□□ -0.8
NXF1-215ENST00000533440 CCDC30Q5VVM6 783 aa10.03□□□□□ -0.8
NXF1-215ENST00000533440 FAM43AQ8N2R8 423 aa10.03□□□□□ -0.8
NXF1-215ENST00000533440 C8orf58Q8NAV2 365 aa10.03□□□□□ -0.8
NXF1-215ENST00000533440 SH3TC2Q8TF17 1288 aa10.03□□□□□ -0.8
NXF1-215ENST00000533440 SHISA4Q96DD7 197 aa10.03□□□□□ -0.8
NXF1-215ENST00000533440 TEPSINQ96N21 525 aa10.03□□□□□ -0.8
NXF1-215ENST00000533440 MPHOSPH8Q99549 860 aa10.03□□□□□ -0.8
NXF1-215ENST00000533440 CHMP4AQ9BY43 222 aa10.03□□□□□ -0.8
NXF1-215ENST00000533440 TLR2O60603 784 aa10.02□□□□□ -0.81
NXF1-215ENST00000533440 MYCP01106 439 aaPredicted RBP10.02□□□□□ -0.81
NXF1-215ENST00000533440 GNRH1P01148 92 aa10.02□□□□□ -0.81
NXF1-215ENST00000533440 KCNJ4P48050 445 aa10.02□□□□□ -0.81
NXF1-215ENST00000533440 CASP7P55210 303 aa10.02□□□□□ -0.81
NXF1-215ENST00000533440 PRMT2P55345 433 aa10.02□□□□□ -0.81
NXF1-215ENST00000533440 LACTBP83111 547 aaPredicted RBP10.02□□□□□ -0.81
NXF1-215ENST00000533440 NEXNQ0ZGT2 675 aa10.02□□□□□ -0.81
NXF1-215ENST00000533440 TNFAIP1Q13829 316 aa10.02□□□□□ -0.81
NXF1-215ENST00000533440 SPDYE2Q495Y8 402 aa10.02□□□□□ -0.81
NXF1-215ENST00000533440 UBE3BQ7Z3V4 1068 aa10.02□□□□□ -0.81
NXF1-215ENST00000533440 UBE2Q1Q7Z7E8 422 aa10.02□□□□□ -0.81
NXF1-215ENST00000533440 SLC17A8Q8NDX2 589 aa10.02□□□□□ -0.81
NXF1-215ENST00000533440 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.02□□□□□ -0.81
NXF1-215ENST00000533440 ARHGAP39Q9C0H5 1083 aa10.02□□□□□ -0.81
NXF1-215ENST00000533440 ZCCHC17Q9NP64 241 aaKnown RBP10.02□□□□□ -0.81
NXF1-215ENST00000533440 ZSWIM8A7E2V4 1837 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms