RNA–Protein interactions for RNA: ENST00000533361.1

SIPA1-208, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 4

Gene SIPA1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-208ENST00000533361 HDAC9Q9UKV0 1011 aa27.61■■■□□ 2.01
SIPA1-208ENST00000533361 PCNTO95613 3336 aa27.61■■■□□ 2.01
SIPA1-208ENST00000533361 CHMP4BQ9H444 224 aaKnown RBP27.6■■■□□ 2.01
SIPA1-208ENST00000533361 TFCP2Q12800 502 aa27.59■■■□□ 2.01
SIPA1-208ENST00000533361 CHAF1AQ13111 956 aaPredicted RBP27.59■■■□□ 2.01
SIPA1-208ENST00000533361 OS9Q13438 667 aaPredicted RBP27.59■■■□□ 2.01
SIPA1-208ENST00000533361 PDE3AQ14432 1141 aa27.59■■■□□ 2.01
SIPA1-208ENST00000533361 C20orf194Q5TEA3 1177 aa27.59■■■□□ 2.01
SIPA1-208ENST00000533361 PGAP2Q9UHJ9 254 aa27.59■■■□□ 2.01
SIPA1-208ENST00000533361 PASKQ96RG2 1323 aa27.59■■■□□ 2.01
SIPA1-208ENST00000533361 F8W031 263 aaPredicted RBP27.58■■■□□ 2.01
SIPA1-208ENST00000533361 POLA2Q14181 598 aa27.58■■■□□ 2.01
SIPA1-208ENST00000533361 SSH3Q8TE77 659 aa27.58■■■□□ 2.01
SIPA1-208ENST00000533361 DCPSQ96C86 337 aaKnown RBP27.58■■■□□ 2.01
SIPA1-208ENST00000533361 AKAP2Q9Y2D5 859 aa27.58■■■□□ 2.01
SIPA1-208ENST00000533361 SCARF1Q14162 830 aa27.57■■■□□ 2
SIPA1-208ENST00000533361 CERS5Q8N5B7 392 aa27.57■■■□□ 2
SIPA1-208ENST00000533361 JMYQ8N9B5 988 aa27.57■■■□□ 2
SIPA1-208ENST00000533361 GLIS2Q9BZE0 524 aaPredicted RBP27.57■■■□□ 2
SIPA1-208ENST00000533361 FAM205AQ6ZU69 1335 aa27.57■■■□□ 2
SIPA1-208ENST00000533361 SURF6O75683 361 aaKnown RBP27.56■■■□□ 2
SIPA1-208ENST00000533361 FKBP1AP62942 108 aaKnown RBP27.56■■■□□ 2
SIPA1-208ENST00000533361 MFSD14BQ5SR56 506 aa27.56■■■□□ 2
SIPA1-208ENST00000533361 CDC37L1Q7L3B6 337 aa27.56■■■□□ 2
SIPA1-208ENST00000533361 TRAF5O00463 557 aa27.55■■■□□ 2
SIPA1-208ENST00000533361 MMP14P50281 582 aa27.55■■■□□ 2
SIPA1-208ENST00000533361 TIMM10P62072 90 aa27.55■■■□□ 2
SIPA1-208ENST00000533361 CEP85Q6P2H3 762 aa27.55■■■□□ 2
SIPA1-208ENST00000533361 USP48Q86UV5 1035 aa27.55■■■□□ 2
SIPA1-208ENST00000533361 GNL3LQ9NVN8 582 aaKnown RBP27.55■■■□□ 2
SIPA1-208ENST00000533361 ZNF646O15015 1829 aaPredicted RBP27.54■■■□□ 2
SIPA1-208ENST00000533361 FMR1Q06787 632 aaKnown RBP eCLIP27.54■■■□□ 2
SIPA1-208ENST00000533361 NEUROD6Q96NK8 337 aa27.54■■■□□ 2
SIPA1-208ENST00000533361 GGA3Q9NZ52 723 aa27.54■■■□□ 2
SIPA1-208ENST00000533361 TMEM88BA6NKF7 163 aa27.53■■■□□ 2
SIPA1-208ENST00000533361 KRT26Q7Z3Y9 468 aa27.53■■■□□ 2
SIPA1-208ENST00000533361 ZBTB40Q9NUA8 1239 aa27.53■■■□□ 2
SIPA1-208ENST00000533361 ASTN2O75129 1339 aaPredicted RBP27.52■■■□□ 2
SIPA1-208ENST00000533361 A0A1B0GUL7 405 aa27.52■■■□□ 2
SIPA1-208ENST00000533361 ADORA1P30542 326 aa27.52■■■□□ 2
SIPA1-208ENST00000533361 ANGEL2Q5VTE6 544 aaKnown RBP27.52■■■□□ 2
SIPA1-208ENST00000533361 CREBZFQ9NS37 354 aa27.52■■■□□ 2
SIPA1-208ENST00000533361 DLGAP5Q15398 846 aa27.51■■□□□ 1.99
SIPA1-208ENST00000533361 NBPF9Q3BBW0 867 aa27.51■■□□□ 1.99
SIPA1-208ENST00000533361 COL13A1Q5TAT6 717 aaPredicted RBP27.51■■□□□ 1.99
SIPA1-208ENST00000533361 SULF1Q8IWU6 871 aa27.51■■□□□ 1.99
SIPA1-208ENST00000533361 TBC1D22AQ8WUA7 517 aa27.51■■□□□ 1.99
SIPA1-208ENST00000533361 ZNF408Q9H9D4 720 aa27.51■■□□□ 1.99
SIPA1-208ENST00000533361 RBM5P52756 815 aaKnown RBP eCLIP27.5■■□□□ 1.99
SIPA1-208ENST00000533361 GORABQ5T7V8 394 aa27.5■■□□□ 1.99
SIPA1-208ENST00000533361 RPAP2Q8IXW5 612 aaPredicted RBP27.5■■□□□ 1.99
SIPA1-208ENST00000533361 TTF2Q9UNY4 1162 aaKnown RBP27.5■■□□□ 1.99
SIPA1-208ENST00000533361 WNT10BO00744 389 aa27.49■■□□□ 1.99
SIPA1-208ENST00000533361 PHKA1P46020 1223 aa27.49■■□□□ 1.99
SIPA1-208ENST00000533361 RRP1P56182 461 aaKnown RBP27.49■■□□□ 1.99
SIPA1-208ENST00000533361 XAGE2Q96GT9 111 aa27.49■■□□□ 1.99
SIPA1-208ENST00000533361 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.49■■□□□ 1.99
SIPA1-208ENST00000533361 ADM5C9JUS6 153 aa27.48■■□□□ 1.99
SIPA1-208ENST00000533361 CELF2O95319 508 aaKnown RBP27.48■■□□□ 1.99
SIPA1-208ENST00000533361 CFAP100Q494V2 611 aa27.48■■□□□ 1.99
SIPA1-208ENST00000533361 CCDC102BQ68D86 513 aa27.48■■□□□ 1.99
SIPA1-208ENST00000533361 ABT1Q9ULW3 272 aaKnown RBP27.48■■□□□ 1.99
SIPA1-208ENST00000533361 NOP58Q9Y2X3 529 aaKnown RBP27.48■■□□□ 1.99
SIPA1-208ENST00000533361 HMMRO75330 724 aa27.47■■□□□ 1.99
SIPA1-208ENST00000533361 DLK2Q6UY11 383 aa27.47■■□□□ 1.99
SIPA1-208ENST00000533361 WDR66Q8TBY9 1149 aa27.47■■□□□ 1.99
SIPA1-208ENST00000533361 POLR2AP24928 1970 aaKnown RBP27.46■■□□□ 1.99
SIPA1-208ENST00000533361 DENND2AQ9ULE3 1009 aa27.46■■□□□ 1.99
SIPA1-208ENST00000533361 SCAF8Q9UPN6 1271 aaKnown RBP27.45■■□□□ 1.98
SIPA1-208ENST00000533361 EXOC6BQ9Y2D4 811 aa27.45■■□□□ 1.98
SIPA1-208ENST00000533361 SEMA3EO15041 775 aa27.44■■□□□ 1.98
SIPA1-208ENST00000533361 GRIK5Q16478 980 aa27.44■■□□□ 1.98
SIPA1-208ENST00000533361 CST9Q5W186 159 aa27.44■■□□□ 1.98
SIPA1-208ENST00000533361 MKRN1Q9UHC7 482 aaKnown RBP27.44■■□□□ 1.98
SIPA1-208ENST00000533361 PCDHAC2Q9Y5I4 1007 aa27.44■■□□□ 1.98
SIPA1-208ENST00000533361 PITPNM2Q9BZ72 1349 aa27.43■■□□□ 1.98
SIPA1-208ENST00000533361 MYO1BO43795 1136 aa27.43■■□□□ 1.98
SIPA1-208ENST00000533361 TNNI3KQ59H18 835 aa27.43■■□□□ 1.98
SIPA1-208ENST00000533361 MTMR14Q8NCE2 650 aa27.43■■□□□ 1.98
SIPA1-208ENST00000533361 ZBED3Q96IU2 234 aaPredicted RBP27.43■■□□□ 1.98
SIPA1-208ENST00000533361 GPR108Q9NPR9 543 aa27.43■■□□□ 1.98
SIPA1-208ENST00000533361 FPGT-TNNI3KV9GXZ4 949 aa27.43■■□□□ 1.98
SIPA1-208ENST00000533361 HSP90AB4PQ58FF6 505 aa27.42■■□□□ 1.98
SIPA1-208ENST00000533361 ERC1Q8IUD2 1116 aa27.42■■□□□ 1.98
SIPA1-208ENST00000533361 SERPINA10Q9UK55 444 aa27.42■■□□□ 1.98
SIPA1-208ENST00000533361 TRPM7Q96QT4 1865 aa27.42■■□□□ 1.98
SIPA1-208ENST00000533361 MYH13Q9UKX3 1938 aa27.41■■□□□ 1.98
SIPA1-208ENST00000533361 CRKP46108 304 aa27.41■■□□□ 1.98
SIPA1-208ENST00000533361 PRMT6Q96LA8 375 aaPredicted RBP27.41■■□□□ 1.98
SIPA1-208ENST00000533361 ARAP2Q8WZ64 1704 aa27.41■■□□□ 1.98
SIPA1-208ENST00000533361 SPDYE2BA6NHP3 402 aa27.4■■□□□ 1.98
SIPA1-208ENST00000533361 APBB1O00213 710 aa27.4■■□□□ 1.98
SIPA1-208ENST00000533361 SPDYE6P0CI01 402 aa27.4■■□□□ 1.98
SIPA1-208ENST00000533361 DEFB115Q30KQ5 88 aa27.4■■□□□ 1.98
SIPA1-208ENST00000533361 APOBEC3FQ8IUX4 373 aaKnown RBP27.4■■□□□ 1.98
SIPA1-208ENST00000533361 SIRT2Q8IXJ6 389 aa27.4■■□□□ 1.98
SIPA1-208ENST00000533361 CDCA5Q96FF9 252 aa27.4■■□□□ 1.98
SIPA1-208ENST00000533361 SUGT1Q9Y2Z0 365 aa27.4■■□□□ 1.98
SIPA1-208ENST00000533361 MAST3O60307 1309 aa27.4■■□□□ 1.98
SIPA1-208ENST00000533361 CLRN2A0PK11 232 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms