RNA–Protein interactions for RNA: ENST00000533309.5

TRIM3-213, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 1,647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-213ENST00000533309 DENND2AQ9ULE3 1009 aa19.29■□□□□ 0.68
TRIM3-213ENST00000533309 TDRD7Q8NHU6 1098 aaKnown RBP19.28■□□□□ 0.68
TRIM3-213ENST00000533309 RUFY2Q8WXA3 655 aa19.28■□□□□ 0.68
TRIM3-213ENST00000533309 USP26Q9BXU7 913 aa19.28■□□□□ 0.68
TRIM3-213ENST00000533309 TMX4Q9H1E5 349 aaPredicted RBP19.28■□□□□ 0.68
TRIM3-213ENST00000533309 CCDC88AQ3V6T2 1871 aa19.28■□□□□ 0.68
TRIM3-213ENST00000533309 MAST2Q6P0Q8 1798 aa19.28■□□□□ 0.68
TRIM3-213ENST00000533309 RNF113AO15541 343 aaKnown RBP19.27■□□□□ 0.68
TRIM3-213ENST00000533309 ZMYM1Q5SVZ6 1142 aa19.27■□□□□ 0.68
TRIM3-213ENST00000533309 CC2D2BQ6DHV5 1058 aa19.27■□□□□ 0.68
TRIM3-213ENST00000533309 RTFDC1Q9BY42 306 aaPredicted RBP19.27■□□□□ 0.68
TRIM3-213ENST00000533309 C22orf23Q9BZE7 217 aa19.27■□□□□ 0.68
TRIM3-213ENST00000533309 C21orf2O43822 256 aa19.26■□□□□ 0.67
TRIM3-213ENST00000533309 IL1R1P14778 569 aa19.26■□□□□ 0.67
TRIM3-213ENST00000533309 ZNF589Q86UQ0 364 aaPredicted RBP19.26■□□□□ 0.67
TRIM3-213ENST00000533309 SEC62Q99442 399 aaKnown RBP19.26■□□□□ 0.67
TRIM3-213ENST00000533309 SPON1Q9HCB6 807 aa19.26■□□□□ 0.67
TRIM3-213ENST00000533309 CD209Q9NNX6 404 aa19.26■□□□□ 0.67
TRIM3-213ENST00000533309 PPP1R1BQ9UD71 204 aaPredicted RBP19.26■□□□□ 0.67
TRIM3-213ENST00000533309 WWC3Q9ULE0 1092 aa19.26■□□□□ 0.67
TRIM3-213ENST00000533309 ZNF646O15015 1829 aaPredicted RBP19.26■□□□□ 0.67
TRIM3-213ENST00000533309 FER1L6Q2WGJ9 1857 aa19.26■□□□□ 0.67
TRIM3-213ENST00000533309 IDH1O75874 414 aaKnown RBP19.25■□□□□ 0.67
TRIM3-213ENST00000533309 ZFYP08048 801 aaPredicted RBP19.25■□□□□ 0.67
TRIM3-213ENST00000533309 RBM25P49756 843 aaKnown RBP19.25■□□□□ 0.67
TRIM3-213ENST00000533309 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.25■□□□□ 0.67
TRIM3-213ENST00000533309 LSG1Q9H089 658 aaKnown RBP19.25■□□□□ 0.67
TRIM3-213ENST00000533309 ANO2Q9NQ90 1003 aa19.25■□□□□ 0.67
TRIM3-213ENST00000533309 PIM2Q9P1W9 311 aa19.25■□□□□ 0.67
TRIM3-213ENST00000533309 SCN9AQ15858 1988 aa19.25■□□□□ 0.67
TRIM3-213ENST00000533309 FRAT2O75474 233 aaPredicted RBP19.25■□□□□ 0.67
TRIM3-213ENST00000533309 ADD2P35612 726 aa19.25■□□□□ 0.67
TRIM3-213ENST00000533309 LRRFIP1Q32MZ4 808 aaKnown RBP19.25■□□□□ 0.67
TRIM3-213ENST00000533309 ARFGEF1Q9Y6D6 1849 aa19.25■□□□□ 0.67
TRIM3-213ENST00000533309 TCRBV5S4A2TA0A5A2 114 aa19.24■□□□□ 0.67
TRIM3-213ENST00000533309 RIMBP2O15034 1052 aa19.24■□□□□ 0.67
TRIM3-213ENST00000533309 PDE6AP16499 860 aa19.24■□□□□ 0.67
TRIM3-213ENST00000533309 WASHC4Q2M389 1173 aa19.24■□□□□ 0.67
TRIM3-213ENST00000533309 SLC9C2Q5TAH2 1124 aa19.24■□□□□ 0.67
TRIM3-213ENST00000533309 KLHL34Q8N239 644 aa19.24■□□□□ 0.67
TRIM3-213ENST00000533309 OSBP2Q969R2 916 aa19.24■□□□□ 0.67
TRIM3-213ENST00000533309 HELLSQ9NRZ9 838 aa19.24■□□□□ 0.67
TRIM3-213ENST00000533309 MAST3O60307 1309 aa19.24■□□□□ 0.67
TRIM3-213ENST00000533309 CHAF1AQ13111 956 aaPredicted RBP19.23■□□□□ 0.67
TRIM3-213ENST00000533309 UBE3CQ15386 1083 aa19.23■□□□□ 0.67
TRIM3-213ENST00000533309 MCMDC2Q4G0Z9 681 aa19.23■□□□□ 0.67
TRIM3-213ENST00000533309 CCDC93Q567U6 631 aa19.23■□□□□ 0.67
TRIM3-213ENST00000533309 ZSCAN25Q6NSZ9 544 aa19.23■□□□□ 0.67
TRIM3-213ENST00000533309 ZC3H12CQ9C0D7 883 aaKnown RBP19.23■□□□□ 0.67
TRIM3-213ENST00000533309 EPB41L2O43491 1005 aaKnown RBP19.22■□□□□ 0.67
TRIM3-213ENST00000533309 PTH1RQ03431 593 aa19.22■□□□□ 0.67
TRIM3-213ENST00000533309 MAP3K12Q12852 859 aa19.22■□□□□ 0.67
TRIM3-213ENST00000533309 CCDC129Q6ZRS4 1044 aa19.22■□□□□ 0.67
TRIM3-213ENST00000533309 APPBP2Q92624 585 aa19.22■□□□□ 0.67
TRIM3-213ENST00000533309 EYA3Q99504 573 aa19.22■□□□□ 0.67
TRIM3-213ENST00000533309 COA1Q9GZY4 146 aa19.22■□□□□ 0.67
TRIM3-213ENST00000533309 JAG2Q9Y219 1238 aa19.22■□□□□ 0.67
TRIM3-213ENST00000533309 CCDC171Q6TFL3 1326 aa19.22■□□□□ 0.67
TRIM3-213ENST00000533309 SALL1Q9NSC2 1324 aa19.22■□□□□ 0.67
TRIM3-213ENST00000533309 M0R2C6 588 aa19.22■□□□□ 0.67
TRIM3-213ENST00000533309 GRIPAP1Q4V328 841 aa19.22■□□□□ 0.67
TRIM3-213ENST00000533309 DALRD3Q5D0E6 543 aaKnown RBP19.22■□□□□ 0.67
TRIM3-213ENST00000533309 NLGN2Q8NFZ4 835 aa19.22■□□□□ 0.67
TRIM3-213ENST00000533309 LRP2BPQ9P2M1 347 aa19.22■□□□□ 0.67
TRIM3-213ENST00000533309 ABCF2Q9UG63 623 aa19.22■□□□□ 0.67
TRIM3-213ENST00000533309 ZNF532Q9HCE3 1301 aa19.21■□□□□ 0.67
TRIM3-213ENST00000533309 SRCAPQ6ZRS2 3230 aa19.21■□□□□ 0.67
TRIM3-213ENST00000533309 PSME4Q14997 1843 aa19.21■□□□□ 0.67
TRIM3-213ENST00000533309 MAGEB6Q8N7X4 407 aa19.21■□□□□ 0.67
TRIM3-213ENST00000533309 ZNF384Q8TF68 577 aa19.21■□□□□ 0.67
TRIM3-213ENST00000533309 PUS7LQ9H0K6 701 aaKnown RBP19.21■□□□□ 0.67
TRIM3-213ENST00000533309 KIAA1211Q6ZU35 1233 aa19.2■□□□□ 0.66
TRIM3-213ENST00000533309 RTKN2Q8IZC4 609 aa19.2■□□□□ 0.66
TRIM3-213ENST00000533309 WDR66Q8TBY9 1149 aa19.2■□□□□ 0.66
TRIM3-213ENST00000533309 PSMD1Q99460 953 aa19.2■□□□□ 0.66
TRIM3-213ENST00000533309 KIF2CQ99661 725 aa19.2■□□□□ 0.66
TRIM3-213ENST00000533309 FAM205AQ6ZU69 1335 aa19.19■□□□□ 0.66
TRIM3-213ENST00000533309 PRDX5P30044 214 aa19.19■□□□□ 0.66
TRIM3-213ENST00000533309 KIAA2012Q0VF49 1180 aa19.19■□□□□ 0.66
TRIM3-213ENST00000533309 DOK7Q18PE1 504 aa19.19■□□□□ 0.66
TRIM3-213ENST00000533309 MYH2Q9UKX2 1941 aa19.19■□□□□ 0.66
TRIM3-213ENST00000533309 SOGA3Q5TF21 947 aa19.18■□□□□ 0.66
TRIM3-213ENST00000533309 SUPT20HQ8NEM7 779 aa19.18■□□□□ 0.66
TRIM3-213ENST00000533309 MAP4K1Q92918 833 aa19.18■□□□□ 0.66
TRIM3-213ENST00000533309 RAI14Q9P0K7 980 aa19.18■□□□□ 0.66
TRIM3-213ENST00000533309 COL4A5P29400 1685 aa19.18■□□□□ 0.66
TRIM3-213ENST00000533309 GRIK5Q16478 980 aa19.18■□□□□ 0.66
TRIM3-213ENST00000533309 AOC3Q16853 763 aa19.18■□□□□ 0.66
TRIM3-213ENST00000533309 ERICH6Q7L0X2 663 aa19.18■□□□□ 0.66
TRIM3-213ENST00000533309 ADGRA1Q86SQ6 560 aa19.18■□□□□ 0.66
TRIM3-213ENST00000533309 NSUN4Q96CB9 384 aaKnown RBP19.18■□□□□ 0.66
TRIM3-213ENST00000533309 FOXP2O15409 715 aa19.17■□□□□ 0.66
TRIM3-213ENST00000533309 HSPA4P34932 840 aa19.17■□□□□ 0.66
TRIM3-213ENST00000533309 VPS53Q5VIR6 699 aa19.17■□□□□ 0.66
TRIM3-213ENST00000533309 ZGPATQ8N5A5 531 aaKnown RBP19.17■□□□□ 0.66
TRIM3-213ENST00000533309 DBNDD1Q9H9R9 158 aa19.17■□□□□ 0.66
TRIM3-213ENST00000533309 PALD1Q9ULE6 856 aa19.17■□□□□ 0.66
TRIM3-213ENST00000533309 GPAA1O43292 621 aa19.16■□□□□ 0.66
TRIM3-213ENST00000533309 MECOMQ03112 1051 aa19.16■□□□□ 0.66
TRIM3-213ENST00000533309 PODNQ7Z5L7 613 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms