RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 NBASA2RRP1 2371 aa2.5□□□□□ -2.01
KNL1-211ENST00000533001 HMOX1P09601 288 aa2.5□□□□□ -2.01
KNL1-211ENST00000533001 BCRP11274 1271 aa2.5□□□□□ -2.01
KNL1-211ENST00000533001 ITGB8P26012 769 aa2.5□□□□□ -2.01
KNL1-211ENST00000533001 METTL16Q86W50 562 aaKnown RBP2.5□□□□□ -2.01
KNL1-211ENST00000533001 PAK6Q9NQU5 681 aaPredicted RBP2.5□□□□□ -2.01
KNL1-211ENST00000533001 MIS18AQ9NYP9 233 aa2.5□□□□□ -2.01
KNL1-211ENST00000533001 KIAA1671Q9BY89 1806 aa2.5□□□□□ -2.01
KNL1-211ENST00000533001 POLQO75417 2590 aa2.5□□□□□ -2.01
KNL1-211ENST00000533001 LINC00271P0C7V0 271 aa2.49□□□□□ -2.01
KNL1-211ENST00000533001 RFX5P48382 616 aaPredicted RBP2.49□□□□□ -2.01
KNL1-211ENST00000533001 LHX8Q68G74 356 aa2.49□□□□□ -2.01
KNL1-211ENST00000533001 BRI3BPQ8WY22 251 aa2.49□□□□□ -2.01
KNL1-211ENST00000533001 ASXL3Q9C0F0 2248 aa2.49□□□□□ -2.01
KNL1-211ENST00000533001 AOC3Q16853 763 aa2.49□□□□□ -2.01
KNL1-211ENST00000533001 RASIP1Q5U651 963 aa2.49□□□□□ -2.01
KNL1-211ENST00000533001 C17orf99Q6UX52 265 aa2.49□□□□□ -2.01
KNL1-211ENST00000533001 TSPYL6Q8N831 410 aa2.49□□□□□ -2.01
KNL1-211ENST00000533001 CTAGE1Q96RT6 745 aa2.49□□□□□ -2.01
KNL1-211ENST00000533001 DNAJC18Q9H819 358 aa2.49□□□□□ -2.01
KNL1-211ENST00000533001 SEC31BQ9NQW1 1179 aa2.49□□□□□ -2.01
KNL1-211ENST00000533001 ZNF112Q9UJU3 913 aa2.49□□□□□ -2.01
KNL1-211ENST00000533001 NLRC5Q86WI3 1866 aa2.49□□□□□ -2.01
KNL1-211ENST00000533001 TANC1Q9C0D5 1861 aa2.49□□□□□ -2.01
KNL1-211ENST00000533001 ATG2BQ96BY7 2078 aa2.49□□□□□ -2.01
KNL1-211ENST00000533001 PSMD14O00487 310 aa2.49□□□□□ -2.01
KNL1-211ENST00000533001 MLLT1Q03111 559 aaPredicted RBP2.49□□□□□ -2.01
KNL1-211ENST00000533001 GPAT2Q6NUI2 795 aa2.49□□□□□ -2.01
KNL1-211ENST00000533001 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.49□□□□□ -2.01
KNL1-211ENST00000533001 GJD2Q9UKL4 321 aa2.49□□□□□ -2.01
KNL1-211ENST00000533001 SPG7Q9UQ90 795 aa2.49□□□□□ -2.01
KNL1-211ENST00000533001 UTYO14607 1347 aa2.49□□□□□ -2.01
KNL1-211ENST00000533001 SYNGAP1Q96PV0 1343 aa2.49□□□□□ -2.01
KNL1-211ENST00000533001 BAZ2AQ9UIF9 1905 aaKnown RBP2.49□□□□□ -2.01
KNL1-211ENST00000533001 CSB-PGBD3P0DP91 1061 aa2.49□□□□□ -2.01
KNL1-211ENST00000533001 SP8Q8IXZ3 490 aa2.49□□□□□ -2.01
KNL1-211ENST00000533001 FAM43AQ8N2R8 423 aa2.49□□□□□ -2.01
KNL1-211ENST00000533001 ZNRF3Q9ULT6 936 aa2.49□□□□□ -2.01
KNL1-211ENST00000533001 GPR25O00155 361 aa2.49□□□□□ -2.01
KNL1-211ENST00000533001 PPP2R1AP30153 589 aa2.49□□□□□ -2.01
KNL1-211ENST00000533001 KIF23Q02241 960 aaPredicted RBP2.49□□□□□ -2.01
KNL1-211ENST00000533001 MTFR1Q15390 333 aa2.49□□□□□ -2.01
KNL1-211ENST00000533001 USP38Q8NB14 1042 aa2.49□□□□□ -2.01
KNL1-211ENST00000533001 TTLL11Q8NHH1 800 aa2.49□□□□□ -2.01
KNL1-211ENST00000533001 TTYH1Q9H313 450 aaPredicted RBP2.49□□□□□ -2.01
KNL1-211ENST00000533001 CD320Q9NPF0 282 aa2.49□□□□□ -2.01
KNL1-211ENST00000533001 MTMR10Q9NXD2 777 aa2.49□□□□□ -2.01
KNL1-211ENST00000533001 SNCAIPQ9Y6H5 919 aa2.49□□□□□ -2.01
KNL1-211ENST00000533001 CANXP27824 592 aaKnown RBP2.48□□□□□ -2.01
KNL1-211ENST00000533001 RFC4P35249 363 aa2.48□□□□□ -2.01
KNL1-211ENST00000533001 EVX2Q03828 476 aa2.48□□□□□ -2.01
KNL1-211ENST00000533001 GPNMBQ14956 572 aa2.48□□□□□ -2.01
KNL1-211ENST00000533001 PRAMEF18Q5VWM3 479 aa2.48□□□□□ -2.01
KNL1-211ENST00000533001 HDGFL2Q7Z4V5 671 aaPredicted RBP2.48□□□□□ -2.01
KNL1-211ENST00000533001 ADARB2Q9NS39 739 aaKnown RBP2.48□□□□□ -2.01
KNL1-211ENST00000533001 DENND4AQ7Z401 1863 aa2.48□□□□□ -2.01
KNL1-211ENST00000533001 PTPRQQ9UMZ3 2332 aa2.48□□□□□ -2.01
KNL1-211ENST00000533001 USP2O75604 605 aaPredicted RBP2.48□□□□□ -2.01
KNL1-211ENST00000533001 FGFR2P21802 821 aa2.48□□□□□ -2.01
KNL1-211ENST00000533001 GPSM2P81274 684 aa2.48□□□□□ -2.01
KNL1-211ENST00000533001 FOXO4P98177 505 aa2.48□□□□□ -2.01
KNL1-211ENST00000533001 CDCA5Q96FF9 252 aa2.48□□□□□ -2.01
KNL1-211ENST00000533001 RAPGEFL1Q9UHV5 662 aa2.48□□□□□ -2.01
KNL1-211ENST00000533001 NOTCH2Q04721 2471 aa2.48□□□□□ -2.01
KNL1-211ENST00000533001 ACACAQ13085 2346 aa2.48□□□□□ -2.01
KNL1-211ENST00000533001 SOX10P56693 466 aa2.48□□□□□ -2.01
KNL1-211ENST00000533001 SHROOM1Q2M3G4 852 aaPredicted RBP2.48□□□□□ -2.01
KNL1-211ENST00000533001 TENM1Q9UKZ4 2725 aa2.48□□□□□ -2.01
KNL1-211ENST00000533001 FBN3Q75N90 2809 aa2.48□□□□□ -2.01
KNL1-211ENST00000533001 LOXHD1Q8IVV2 1947 aa2.48□□□□□ -2.01
KNL1-211ENST00000533001 CAPN15O75808 1086 aa2.48□□□□□ -2.01
KNL1-211ENST00000533001 ARHGEF15O94989 841 aa2.48□□□□□ -2.01
KNL1-211ENST00000533001 FGD4Q96M96 766 aa2.48□□□□□ -2.01
KNL1-211ENST00000533001 U3KPZ7 1027 aaPredicted RBP2.48□□□□□ -2.01
KNL1-211ENST00000533001 FAM205AQ6ZU69 1335 aa2.48□□□□□ -2.01
KNL1-211ENST00000533001 FBN1P35555 2871 aaKnown RBP2.48□□□□□ -2.01
KNL1-211ENST00000533001 SPDYE2BA6NHP3 402 aa2.47□□□□□ -2.01
KNL1-211ENST00000533001 H7C1W4 665 aa2.47□□□□□ -2.01
KNL1-211ENST00000533001 SPDYE6P0CI01 402 aa2.47□□□□□ -2.01
KNL1-211ENST00000533001 PTPN12Q05209 780 aaKnown RBP2.47□□□□□ -2.01
KNL1-211ENST00000533001 TCIRG1Q13488 830 aa2.47□□□□□ -2.01
KNL1-211ENST00000533001 LRIT3Q3SXY7 679 aa2.47□□□□□ -2.01
KNL1-211ENST00000533001 SPDYE2Q495Y8 402 aa2.47□□□□□ -2.01
KNL1-211ENST00000533001 CCDC93Q567U6 631 aa2.47□□□□□ -2.01
KNL1-211ENST00000533001 RGMBQ6NW40 437 aa2.47□□□□□ -2.01
KNL1-211ENST00000533001 C16orf59Q7L2K0 433 aa2.47□□□□□ -2.01
KNL1-211ENST00000533001 CNKSR1Q969H4 720 aa2.47□□□□□ -2.01
KNL1-211ENST00000533001 PDZRN3Q9UPQ7 1066 aa2.47□□□□□ -2.01
KNL1-211ENST00000533001 SMIM22K7EJ46 135 aa2.47□□□□□ -2.01
KNL1-211ENST00000533001 CTAGE5O15320 804 aa2.47□□□□□ -2.01
KNL1-211ENST00000533001 EPHB4P54760 987 aa2.47□□□□□ -2.01
KNL1-211ENST00000533001 MAP2K1Q02750 393 aaPredicted RBP2.47□□□□□ -2.01
KNL1-211ENST00000533001 DZIP3Q86Y13 1208 aaKnown RBP2.47□□□□□ -2.01
KNL1-211ENST00000533001 CNOT7Q9UIV1 285 aaKnown RBP2.47□□□□□ -2.01
KNL1-211ENST00000533001 MED23Q9ULK4 1368 aa2.47□□□□□ -2.01
KNL1-211ENST00000533001 COL4A2P08572 1712 aa2.47□□□□□ -2.01
KNL1-211ENST00000533001 AHCTF1Q8WYP5 2266 aa2.47□□□□□ -2.01
KNL1-211ENST00000533001 H0YGN5 161 aa2.47□□□□□ -2.01
KNL1-211ENST00000533001 PRKAR2BP31323 418 aa2.47□□□□□ -2.01
KNL1-211ENST00000533001 NOGQ13253 232 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms