RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 IFIT1P09914 478 aaKnown RBP19.12■□□□□ 0.65
CPSF1-210ENST00000532935 FKBP1AP62942 108 aaKnown RBP19.12■□□□□ 0.65
CPSF1-210ENST00000532935 SCARF1Q14162 830 aa19.12■□□□□ 0.65
CPSF1-210ENST00000532935 CAVIN4Q5BKX8 364 aa19.12■□□□□ 0.65
CPSF1-210ENST00000532935 CST9Q5W186 159 aa19.12■□□□□ 0.65
CPSF1-210ENST00000532935 CEP126Q9P2H0 1117 aa19.12■□□□□ 0.65
CPSF1-210ENST00000532935 HDAC9Q9UKV0 1011 aa19.12■□□□□ 0.65
CPSF1-210ENST00000532935 SLC5A1P13866 664 aa19.11■□□□□ 0.65
CPSF1-210ENST00000532935 KRT26Q7Z3Y9 468 aa19.11■□□□□ 0.65
CPSF1-210ENST00000532935 PANK1Q8TE04 598 aa19.11■□□□□ 0.65
CPSF1-210ENST00000532935 LPIN2Q92539 896 aa19.11■□□□□ 0.65
CPSF1-210ENST00000532935 MKRN1Q9UHC7 482 aaKnown RBP19.11■□□□□ 0.65
CPSF1-210ENST00000532935 CNTNAP1P78357 1384 aa19.1■□□□□ 0.65
CPSF1-210ENST00000532935 PNMA6EA0A0J9YXQ4 647 aa19.1■□□□□ 0.65
CPSF1-210ENST00000532935 ZBTB7BO15156 539 aaPredicted RBP19.1■□□□□ 0.65
CPSF1-210ENST00000532935 ANGEL2Q5VTE6 544 aaKnown RBP19.1■□□□□ 0.65
CPSF1-210ENST00000532935 JMYQ8N9B5 988 aa19.1■□□□□ 0.65
CPSF1-210ENST00000532935 ABT1Q9ULW3 272 aaKnown RBP19.1■□□□□ 0.65
CPSF1-210ENST00000532935 ADM5C9JUS6 153 aa19.09■□□□□ 0.65
CPSF1-210ENST00000532935 CELF2O95319 508 aaKnown RBP19.09■□□□□ 0.65
CPSF1-210ENST00000532935 MS4A1P11836 297 aa19.09■□□□□ 0.65
CPSF1-210ENST00000532935 BCAMP50895 628 aa19.09■□□□□ 0.65
CPSF1-210ENST00000532935 ATP2B3Q16720 1220 aa19.09■□□□□ 0.65
CPSF1-210ENST00000532935 NBPF9Q3BBW0 867 aa19.09■□□□□ 0.65
CPSF1-210ENST00000532935 DLK2Q6UY11 383 aa19.09■□□□□ 0.65
CPSF1-210ENST00000532935 SULF1Q8IWU6 871 aa19.09■□□□□ 0.65
CPSF1-210ENST00000532935 IQSEC3Q9UPP2 1182 aaPredicted RBP19.09■□□□□ 0.65
CPSF1-210ENST00000532935 PITPNM2Q9BZ72 1349 aa19.08■□□□□ 0.65
CPSF1-210ENST00000532935 F8W031 263 aaPredicted RBP19.08■□□□□ 0.64
CPSF1-210ENST00000532935 WNT10BO00744 389 aa19.08■□□□□ 0.64
CPSF1-210ENST00000532935 FRAT2O75474 233 aaPredicted RBP19.08■□□□□ 0.64
CPSF1-210ENST00000532935 MFSD14BQ5SR56 506 aa19.08■□□□□ 0.64
CPSF1-210ENST00000532935 C1orf115Q9H7X2 142 aa19.08■□□□□ 0.64
CPSF1-210ENST00000532935 ZNF408Q9H9D4 720 aa19.08■□□□□ 0.64
CPSF1-210ENST00000532935 RASSF10A6NK89 507 aa19.07■□□□□ 0.64
CPSF1-210ENST00000532935 CHAF1AQ13111 956 aaPredicted RBP19.07■□□□□ 0.64
CPSF1-210ENST00000532935 ZBED3Q96IU2 234 aaPredicted RBP19.07■□□□□ 0.64
CPSF1-210ENST00000532935 ATP8B2P98198 1209 aa19.06■□□□□ 0.64
CPSF1-210ENST00000532935 DLGAP5Q15398 846 aa19.06■□□□□ 0.64
CPSF1-210ENST00000532935 DEFB115Q30KQ5 88 aa19.06■□□□□ 0.64
CPSF1-210ENST00000532935 TLL2Q9Y6L7 1015 aa19.06■□□□□ 0.64
CPSF1-210ENST00000532935 TFCP2Q12800 502 aa19.05■□□□□ 0.64
CPSF1-210ENST00000532935 POLA2Q14181 598 aa19.05■□□□□ 0.64
CPSF1-210ENST00000532935 MTMR14Q8NCE2 650 aa19.05■□□□□ 0.64
CPSF1-210ENST00000532935 SSH3Q8TE77 659 aa19.05■□□□□ 0.64
CPSF1-210ENST00000532935 TBC1D22AQ8WUA7 517 aa19.05■□□□□ 0.64
CPSF1-210ENST00000532935 VEGFBP49765 207 aa19.04■□□□□ 0.64
CPSF1-210ENST00000532935 G3BP1Q13283 466 aaKnown RBP eCLIP19.04■□□□□ 0.64
CPSF1-210ENST00000532935 MVPQ14764 893 aaKnown RBP19.04■□□□□ 0.64
CPSF1-210ENST00000532935 CFAP100Q494V2 611 aa19.04■□□□□ 0.64
CPSF1-210ENST00000532935 CDCA5Q96FF9 252 aa19.04■□□□□ 0.64
CPSF1-210ENST00000532935 TTF2Q9UNY4 1162 aaKnown RBP19.04■□□□□ 0.64
CPSF1-210ENST00000532935 SCAF8Q9UPN6 1271 aaKnown RBP19.04■□□□□ 0.64
CPSF1-210ENST00000532935 AKAP2Q9Y2D5 859 aa19.04■□□□□ 0.64
CPSF1-210ENST00000532935 SAPCD2Q86UD0 394 aa19.03■□□□□ 0.64
CPSF1-210ENST00000532935 PCDHAC2Q9Y5I4 1007 aa19.03■□□□□ 0.64
CPSF1-210ENST00000532935 COL1A1P02452 1464 aaPredicted RBP19.03■□□□□ 0.64
CPSF1-210ENST00000532935 SPDYE2BA6NHP3 402 aa19.02■□□□□ 0.64
CPSF1-210ENST00000532935 SPDYE6P0CI01 402 aa19.02■□□□□ 0.64
CPSF1-210ENST00000532935 ADORA1P30542 326 aa19.02■□□□□ 0.64
CPSF1-210ENST00000532935 TIMM10P62072 90 aa19.02■□□□□ 0.64
CPSF1-210ENST00000532935 GRIK5Q16478 980 aa19.02■□□□□ 0.64
CPSF1-210ENST00000532935 YTHDC1Q96MU7 727 aaKnown RBP19.02■□□□□ 0.64
CPSF1-210ENST00000532935 GNL3LQ9NVN8 582 aaKnown RBP19.02■□□□□ 0.64
CPSF1-210ENST00000532935 COG6Q9Y2V7 657 aa19.02■□□□□ 0.64
CPSF1-210ENST00000532935 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.02■□□□□ 0.64
CPSF1-210ENST00000532935 THSD7BQ9C0I4 1608 aa19.01■□□□□ 0.63
CPSF1-210ENST00000532935 A0A1B0GUL7 405 aa19.01■□□□□ 0.63
CPSF1-210ENST00000532935 PHKA1P46020 1223 aa19.01■□□□□ 0.63
CPSF1-210ENST00000532935 RBM5P52756 815 aaKnown RBP eCLIP19.01■□□□□ 0.63
CPSF1-210ENST00000532935 CEP85Q6P2H3 762 aa19.01■□□□□ 0.63
CPSF1-210ENST00000532935 APOBEC3FQ8IUX4 373 aaKnown RBP19.01■□□□□ 0.63
CPSF1-210ENST00000532935 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.01■□□□□ 0.63
CPSF1-210ENST00000532935 PRMT6Q96LA8 375 aaPredicted RBP19.01■□□□□ 0.63
CPSF1-210ENST00000532935 GBA2Q9HCG7 927 aaPredicted RBP19.01■□□□□ 0.63
CPSF1-210ENST00000532935 SERPINA10Q9UK55 444 aa19.01■□□□□ 0.63
CPSF1-210ENST00000532935 DDX19BQ9UMR2 479 aa19.01■□□□□ 0.63
CPSF1-210ENST00000532935 PAPPA2Q9BXP8 1791 aa19.01■□□□□ 0.63
CPSF1-210ENST00000532935 WDR33Q9C0J8 1336 aaKnown RBP19■□□□□ 0.63
CPSF1-210ENST00000532935 MYO1BO43795 1136 aa19■□□□□ 0.63
CPSF1-210ENST00000532935 CCDC102BQ68D86 513 aa19■□□□□ 0.63
CPSF1-210ENST00000532935 CYP4F22Q6NT55 531 aa19■□□□□ 0.63
CPSF1-210ENST00000532935 PAXIP1Q6ZW49 1069 aaPredicted RBP19■□□□□ 0.63
CPSF1-210ENST00000532935 C2orf69Q8N8R5 385 aa19■□□□□ 0.63
CPSF1-210ENST00000532935 WDR66Q8TBY9 1149 aa19■□□□□ 0.63
CPSF1-210ENST00000532935 XAGE2Q96GT9 111 aa19■□□□□ 0.63
CPSF1-210ENST00000532935 HHIPL1Q96JK4 782 aa19■□□□□ 0.63
CPSF1-210ENST00000532935 SEMA3EO15041 775 aa18.99■□□□□ 0.63
CPSF1-210ENST00000532935 SURF6O75683 361 aaKnown RBP18.99■□□□□ 0.63
CPSF1-210ENST00000532935 ECE1P42892 770 aa18.99■□□□□ 0.63
CPSF1-210ENST00000532935 CRKP46108 304 aa18.99■□□□□ 0.63
CPSF1-210ENST00000532935 OS9Q13438 667 aaPredicted RBP18.99■□□□□ 0.63
CPSF1-210ENST00000532935 PDE3AQ14432 1141 aa18.99■□□□□ 0.63
CPSF1-210ENST00000532935 CAPNS2Q96L46 248 aa18.99■□□□□ 0.63
CPSF1-210ENST00000532935 NEUROD6Q96NK8 337 aa18.99■□□□□ 0.63
CPSF1-210ENST00000532935 DENND2AQ9ULE3 1009 aa18.99■□□□□ 0.63
CPSF1-210ENST00000532935 SUGT1Q9Y2Z0 365 aa18.99■□□□□ 0.63
CPSF1-210ENST00000532935 AOX1Q06278 1338 aa18.99■□□□□ 0.63
CPSF1-210ENST00000532935 CLRN2A0PK11 232 aa18.98■□□□□ 0.63
CPSF1-210ENST00000532935 ZBTB22O15209 634 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms