RNA–Protein interactions for RNA: ENST00000532787.5

CTNND1-233, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-233ENST00000532787 NKIRAS1Q9NYS0 192 aa8.57□□□□□ -1.04
CTNND1-233ENST00000532787 SLC4A4Q9Y6R1 1079 aa8.57□□□□□ -1.04
CTNND1-233ENST00000532787 NUTM2BA6NNL0 878 aaPredicted RBP8.57□□□□□ -1.04
CTNND1-233ENST00000532787 NUTM2EB1AL46 878 aaPredicted RBP8.57□□□□□ -1.04
CTNND1-233ENST00000532787 HAND2P61296 217 aa8.57□□□□□ -1.04
CTNND1-233ENST00000532787 GBP6Q6ZN66 633 aa8.57□□□□□ -1.04
CTNND1-233ENST00000532787 APBB1IPQ7Z5R6 666 aaPredicted RBP8.57□□□□□ -1.04
CTNND1-233ENST00000532787 RRP36Q96EU6 259 aaKnown RBP8.57□□□□□ -1.04
CTNND1-233ENST00000532787 NUP58Q9BVL2 599 aa8.57□□□□□ -1.04
CTNND1-233ENST00000532787 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.57□□□□□ -1.04
CTNND1-233ENST00000532787 EXOC5O00471 708 aa8.57□□□□□ -1.04
CTNND1-233ENST00000532787 ST5P78524 1137 aa8.57□□□□□ -1.04
CTNND1-233ENST00000532787 ATP11AP98196 1134 aa8.57□□□□□ -1.04
CTNND1-233ENST00000532787 DNM1Q05193 864 aaKnown RBP8.57□□□□□ -1.04
CTNND1-233ENST00000532787 ATP2B3Q16720 1220 aa8.57□□□□□ -1.04
CTNND1-233ENST00000532787 ZNF569Q5MCW4 686 aa8.57□□□□□ -1.04
CTNND1-233ENST00000532787 KSR2Q6VAB6 950 aa8.57□□□□□ -1.04
CTNND1-233ENST00000532787 RUFY3Q7L099 469 aa8.57□□□□□ -1.04
CTNND1-233ENST00000532787 UBE3BQ7Z3V4 1068 aa8.57□□□□□ -1.04
CTNND1-233ENST00000532787 CACNA2D3Q8IZS8 1091 aa8.57□□□□□ -1.04
CTNND1-233ENST00000532787 LLPHQ9BRT6 129 aaKnown RBP8.57□□□□□ -1.04
CTNND1-233ENST00000532787 HMGB1P1B2RPK0 211 aaPredicted RBP8.56□□□□□ -1.04
CTNND1-233ENST00000532787 RNF113AO15541 343 aaKnown RBP8.56□□□□□ -1.04
CTNND1-233ENST00000532787 FAM13AO94988 1023 aa8.56□□□□□ -1.04
CTNND1-233ENST00000532787 NAPAP54920 295 aa8.56□□□□□ -1.04
CTNND1-233ENST00000532787 ISM2Q6H9L7 571 aa8.56□□□□□ -1.04
CTNND1-233ENST00000532787 NECAB1Q8N987 351 aa8.56□□□□□ -1.04
CTNND1-233ENST00000532787 AFAP1L1Q8TED9 768 aa8.56□□□□□ -1.04
CTNND1-233ENST00000532787 TSKSQ9UJT2 592 aa8.56□□□□□ -1.04
CTNND1-233ENST00000532787 MRVI1Q9Y6F6 885 aa8.56□□□□□ -1.04
CTNND1-233ENST00000532787 GRM8O00222 908 aa8.56□□□□□ -1.04
CTNND1-233ENST00000532787 ATP2C2O75185 946 aa8.56□□□□□ -1.04
CTNND1-233ENST00000532787 PLCD1P51178 756 aa8.56□□□□□ -1.04
CTNND1-233ENST00000532787 INTS8Q75QN2 995 aaKnown RBP8.56□□□□□ -1.04
CTNND1-233ENST00000532787 LMNTD2Q8IXW0 634 aa8.56□□□□□ -1.04
CTNND1-233ENST00000532787 DCTPP1Q9H773 170 aa8.56□□□□□ -1.04
CTNND1-233ENST00000532787 CYP7A1P22680 504 aa8.56□□□□□ -1.04
CTNND1-233ENST00000532787 PRIM1P49642 420 aaKnown RBP8.56□□□□□ -1.04
CTNND1-233ENST00000532787 DHX32Q7L7V1 743 aaKnown RBP8.56□□□□□ -1.04
CTNND1-233ENST00000532787 BAG1Q99933 345 aaPredicted RBP8.56□□□□□ -1.04
CTNND1-233ENST00000532787 SUDS3Q9H7L9 328 aaPredicted RBP8.56□□□□□ -1.04
CTNND1-233ENST00000532787 HELLSQ9NRZ9 838 aa8.56□□□□□ -1.04
CTNND1-233ENST00000532787 TXNDC16Q9P2K2 825 aa8.56□□□□□ -1.04
CTNND1-233ENST00000532787 ACTN4O43707 911 aaKnown RBP8.56□□□□□ -1.04
CTNND1-233ENST00000532787 NOS1P29475 1434 aa8.56□□□□□ -1.04
CTNND1-233ENST00000532787 GBP1P32455 592 aa8.56□□□□□ -1.04
CTNND1-233ENST00000532787 SH3BGRP55822 239 aaPredicted RBP8.56□□□□□ -1.04
CTNND1-233ENST00000532787 FAM160A1Q05DH4 1040 aa8.56□□□□□ -1.04
CTNND1-233ENST00000532787 C8orf34Q49A92 452 aa8.56□□□□□ -1.04
CTNND1-233ENST00000532787 FYB2Q5VWT5 728 aa8.56□□□□□ -1.04
CTNND1-233ENST00000532787 HEATR3Q7Z4Q2 680 aa8.56□□□□□ -1.04
CTNND1-233ENST00000532787 DHX58Q96C10 678 aa8.56□□□□□ -1.04
CTNND1-233ENST00000532787 NAPGQ99747 312 aaPredicted RBP8.56□□□□□ -1.04
CTNND1-233ENST00000532787 VAT1LQ9HCJ6 419 aa8.56□□□□□ -1.04
CTNND1-233ENST00000532787 PAG1Q9NWQ8 432 aa8.56□□□□□ -1.04
CTNND1-233ENST00000532787 PPP1R1BQ9UD71 204 aaPredicted RBP8.56□□□□□ -1.04
CTNND1-233ENST00000532787 ARHGAP25P42331 645 aa8.56□□□□□ -1.04
CTNND1-233ENST00000532787 CYP26C1Q6V0L0 522 aa8.56□□□□□ -1.04
CTNND1-233ENST00000532787 WAPLQ7Z5K2 1190 aa8.56□□□□□ -1.04
CTNND1-233ENST00000532787 C10orf67Q8IYJ2 551 aa8.56□□□□□ -1.04
CTNND1-233ENST00000532787 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.56□□□□□ -1.046e-14■□□□□ 9.9
CTNND1-233ENST00000532787 GABPB2Q8TAK5 448 aaPredicted RBP8.56□□□□□ -1.04
CTNND1-233ENST00000532787 STMN2Q93045 179 aa8.56□□□□□ -1.04
CTNND1-233ENST00000532787 ZFP91Q96JP5 570 aaPredicted RBP8.56□□□□□ -1.04
CTNND1-233ENST00000532787 GLT8D2Q9H1C3 349 aa8.56□□□□□ -1.04
CTNND1-233ENST00000532787 FAM184BQ9ULE4 1060 aa8.56□□□□□ -1.04
CTNND1-233ENST00000532787 ATP6V0A2Q9Y487 856 aa8.56□□□□□ -1.04
CTNND1-233ENST00000532787 PIK3C2GO75747 1445 aa8.55□□□□□ -1.04
CTNND1-233ENST00000532787 PPP2R3AQ06190 1150 aa8.55□□□□□ -1.04
CTNND1-233ENST00000532787 CCDC63Q8NA47 563 aa8.55□□□□□ -1.04
CTNND1-233ENST00000532787 KIFAP3Q92845 792 aa8.55□□□□□ -1.04
CTNND1-233ENST00000532787 CD109Q6YHK3 1445 aa8.55□□□□□ -1.04
CTNND1-233ENST00000532787 GMNNO75496 209 aa8.55□□□□□ -1.04
CTNND1-233ENST00000532787 PPP1R7Q15435 360 aa8.55□□□□□ -1.04
CTNND1-233ENST00000532787 DTHD1Q6ZMT9 781 aa8.55□□□□□ -1.04
CTNND1-233ENST00000532787 CCDC65Q8IXS2 484 aa8.55□□□□□ -1.04
CTNND1-233ENST00000532787 ARHGAP24Q8N264 748 aa8.55□□□□□ -1.04
CTNND1-233ENST00000532787 SMARCC2Q8TAQ2 1214 aa8.55□□□□□ -1.04
CTNND1-233ENST00000532787 ZBTB3Q9H5J0 574 aa8.55□□□□□ -1.04
CTNND1-233ENST00000532787 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.55□□□□□ -1.045e-6■■■□□ 17.3
CTNND1-233ENST00000532787 DISP3Q9P2K9 1392 aa8.55□□□□□ -1.04
CTNND1-233ENST00000532787 CCDC160A6NGH7 325 aa8.55□□□□□ -1.04
CTNND1-233ENST00000532787 C6orf229H3BNL8 230 aa8.55□□□□□ -1.04
CTNND1-233ENST00000532787 KIF3CO14782 793 aa8.55□□□□□ -1.04
CTNND1-233ENST00000532787 NCBP1Q09161 790 aaKnown RBP8.55□□□□□ -1.04
CTNND1-233ENST00000532787 AKAP4Q5JQC9 854 aa8.55□□□□□ -1.04
CTNND1-233ENST00000532787 SYT10Q6XYQ8 523 aa8.55□□□□□ -1.04
CTNND1-233ENST00000532787 RUFY4Q6ZNE9 571 aa8.55□□□□□ -1.04
CTNND1-233ENST00000532787 SEC62Q99442 399 aaKnown RBP8.55□□□□□ -1.04
CTNND1-233ENST00000532787 IFNKQ9P0W0 207 aa8.55□□□□□ -1.04
CTNND1-233ENST00000532787 GUCA1BQ9UMX6 200 aa8.55□□□□□ -1.04
CTNND1-233ENST00000532787 DNAJC21Q5F1R6 531 aaKnown RBP8.55□□□□□ -1.04
CTNND1-233ENST00000532787 CREB3L3Q68CJ9 461 aa8.55□□□□□ -1.04
CTNND1-233ENST00000532787 NAA16Q6N069 864 aaPredicted RBP8.55□□□□□ -1.04
CTNND1-233ENST00000532787 ZNF830Q96NB3 372 aaPredicted RBP8.55□□□□□ -1.04
CTNND1-233ENST00000532787 LARP6Q9BRS8 491 aaKnown RBP8.55□□□□□ -1.04
CTNND1-233ENST00000532787 PARD3Q8TEW0 1356 aa8.55□□□□□ -1.04
CTNND1-233ENST00000532787 MAGEB6P1A0A0J9YX57 407 aa8.54□□□□□ -1.04
CTNND1-233ENST00000532787 GAS8O95995 478 aa8.54□□□□□ -1.04
CTNND1-233ENST00000532787 NMIQ13287 307 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms