RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 PITPNM2Q9BZ72 1349 aa22.4■■□□□ 1.18
SMG1-203ENST00000532700 CT47B1P0C2W7 299 aaPredicted RBP22.4■■□□□ 1.18
SMG1-203ENST00000532700 GRIK5Q16478 980 aa22.4■■□□□ 1.18
SMG1-203ENST00000532700 TNS4Q8IZW8 715 aa22.4■■□□□ 1.18
SMG1-203ENST00000532700 UBE4AQ14139 1066 aa22.39■■□□□ 1.17
SMG1-203ENST00000532700 TDRD7Q8NHU6 1098 aaKnown RBP22.39■■□□□ 1.17
SMG1-203ENST00000532700 IQSEC3Q9UPP2 1182 aaPredicted RBP22.39■■□□□ 1.17
SMG1-203ENST00000532700 BCAR3O75815 825 aa22.38■■□□□ 1.17
SMG1-203ENST00000532700 CTCFP49711 727 aaPredicted RBP22.38■■□□□ 1.17
SMG1-203ENST00000532700 OGFOD1Q8N543 542 aa22.38■■□□□ 1.17
SMG1-203ENST00000532700 AIDAQ96BJ3 306 aa22.38■■□□□ 1.17
SMG1-203ENST00000532700 MEIS3Q99687 375 aa22.38■■□□□ 1.17
SMG1-203ENST00000532700 SSC5DA1L4H1 1573 aa22.38■■□□□ 1.17
SMG1-203ENST00000532700 MROH5Q6ZUA9 1318 aa22.37■■□□□ 1.17
SMG1-203ENST00000532700 MAP2K1Q02750 393 aaPredicted RBP22.37■■□□□ 1.17
SMG1-203ENST00000532700 C2orf69Q8N8R5 385 aa22.37■■□□□ 1.17
SMG1-203ENST00000532700 FZD1Q9UP38 647 aa22.37■■□□□ 1.17
SMG1-203ENST00000532700 MYH13Q9UKX3 1938 aa22.37■■□□□ 1.17
SMG1-203ENST00000532700 FAM205AQ6ZU69 1335 aa22.36■■□□□ 1.17
SMG1-203ENST00000532700 PTPN12Q05209 780 aaKnown RBP22.36■■□□□ 1.17
SMG1-203ENST00000532700 METTL24Q5JXM2 366 aa22.36■■□□□ 1.17
SMG1-203ENST00000532700 RGMBQ6NW40 437 aa22.36■■□□□ 1.17
SMG1-203ENST00000532700 ATG9AQ7Z3C6 839 aa22.36■■□□□ 1.17
SMG1-203ENST00000532700 LRRFIP2Q9Y608 721 aaKnown RBP22.36■■□□□ 1.17
SMG1-203ENST00000532700 COL1A1P02452 1464 aaPredicted RBP22.35■■□□□ 1.17
SMG1-203ENST00000532700 HIBADHP31937 336 aaKnown RBP22.35■■□□□ 1.17
SMG1-203ENST00000532700 MAP2K2P36507 400 aa22.35■■□□□ 1.17
SMG1-203ENST00000532700 HNRNPUQ00839 825 aaKnown RBP eCLIP22.35■■□□□ 1.17
SMG1-203ENST00000532700 FBXO33Q7Z6M2 555 aa22.35■■□□□ 1.17
SMG1-203ENST00000532700 PRDM10Q9NQV6 1147 aa22.35■■□□□ 1.17
SMG1-203ENST00000532700 CAPN15O75808 1086 aa22.34■■□□□ 1.17
SMG1-203ENST00000532700 PDE8BO95263 885 aa22.34■■□□□ 1.17
SMG1-203ENST00000532700 UBTFL1P0CB47 393 aaPredicted RBP22.34■■□□□ 1.17
SMG1-203ENST00000532700 FGFR2P21802 821 aa22.34■■□□□ 1.17
SMG1-203ENST00000532700 PRMT6Q96LA8 375 aaPredicted RBP22.34■■□□□ 1.17
SMG1-203ENST00000532700 API5Q9BZZ5 524 aaKnown RBP22.34■■□□□ 1.17
SMG1-203ENST00000532700 CLRN2A0PK11 232 aa22.33■■□□□ 1.17
SMG1-203ENST00000532700 TRIM27P14373 513 aa22.33■■□□□ 1.17
SMG1-203ENST00000532700 BCAMP50895 628 aa22.33■■□□□ 1.17
SMG1-203ENST00000532700 CFAP100Q494V2 611 aa22.33■■□□□ 1.17
SMG1-203ENST00000532700 SIL1Q9H173 461 aa22.33■■□□□ 1.17
SMG1-203ENST00000532700 PA2G4Q9UQ80 394 aaKnown RBP22.33■■□□□ 1.17
SMG1-203ENST00000532700 UBE2Q2LH0YL09 131 aa22.32■■□□□ 1.16
SMG1-203ENST00000532700 EYA2O00167 538 aa22.32■■□□□ 1.16
SMG1-203ENST00000532700 SLC10A3P09131 477 aa22.32■■□□□ 1.16
SMG1-203ENST00000532700 ZNF157P51786 506 aaPredicted RBP22.32■■□□□ 1.16
SMG1-203ENST00000532700 FKBP1AP62942 108 aaKnown RBP22.32■■□□□ 1.16
SMG1-203ENST00000532700 MFSD14BQ5SR56 506 aa22.32■■□□□ 1.16
SMG1-203ENST00000532700 RASAL3Q86YV0 1011 aa22.32■■□□□ 1.16
SMG1-203ENST00000532700 MTMR14Q8NCE2 650 aa22.32■■□□□ 1.16
SMG1-203ENST00000532700 HDAC9Q9UKV0 1011 aa22.32■■□□□ 1.16
SMG1-203ENST00000532700 OTOFQ9HC10 1997 aa22.31■■□□□ 1.16
SMG1-203ENST00000532700 SPDYE2BA6NHP3 402 aa22.31■■□□□ 1.16
SMG1-203ENST00000532700 SPDYE6P0CI01 402 aa22.31■■□□□ 1.16
SMG1-203ENST00000532700 KIF23Q02241 960 aaPredicted RBP22.31■■□□□ 1.16
SMG1-203ENST00000532700 DLGAP5Q15398 846 aa22.31■■□□□ 1.16
SMG1-203ENST00000532700 INTS3Q68E01 1043 aaKnown RBP22.31■■□□□ 1.16
SMG1-203ENST00000532700 KIF16BQ96L93 1317 aa22.31■■□□□ 1.16
SMG1-203ENST00000532700 CASP8AP2Q9UKL3 1982 aa22.3■■□□□ 1.16
SMG1-203ENST00000532700 CHAF1AQ13111 956 aaPredicted RBP22.3■■□□□ 1.16
SMG1-203ENST00000532700 NOGQ13253 232 aa22.3■■□□□ 1.16
SMG1-203ENST00000532700 PRKG1Q13976 671 aa22.3■■□□□ 1.16
SMG1-203ENST00000532700 CDAN1Q8IWY9 1227 aa22.29■■□□□ 1.16
SMG1-203ENST00000532700 ARHGAP45Q92619 1136 aa22.29■■□□□ 1.16
SMG1-203ENST00000532700 CLUAP1Q96AJ1 413 aa22.29■■□□□ 1.16
SMG1-203ENST00000532700 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.29■■□□□ 1.16
SMG1-203ENST00000532700 AKAP11Q9UKA4 1901 aa22.28■■□□□ 1.16
SMG1-203ENST00000532700 APOBEC3FQ8IUX4 373 aaKnown RBP22.28■■□□□ 1.16
SMG1-203ENST00000532700 FRAT1Q92837 279 aaPredicted RBP22.28■■□□□ 1.16
SMG1-203ENST00000532700 TTF2Q9UNY4 1162 aaKnown RBP22.28■■□□□ 1.16
SMG1-203ENST00000532700 PUM3Q15397 648 aaKnown RBP22.27■■□□□ 1.16
SMG1-203ENST00000532700 DEFB129Q9H1M3 183 aa22.27■■□□□ 1.16
SMG1-203ENST00000532700 MMP14P50281 582 aa22.26■■□□□ 1.15
SMG1-203ENST00000532700 FKBP1BP68106 108 aa22.26■■□□□ 1.15
SMG1-203ENST00000532700 CSRNP1Q96S65 589 aa22.26■■□□□ 1.15
SMG1-203ENST00000532700 RBM5P52756 815 aaKnown RBP eCLIP22.25■■□□□ 1.15
SMG1-203ENST00000532700 ATF7IPQ6VMQ6 1270 aa22.25■■□□□ 1.15
SMG1-203ENST00000532700 CCDC102AQ96A19 550 aa22.25■■□□□ 1.15
SMG1-203ENST00000532700 BEGAINQ9BUH8 593 aa22.25■■□□□ 1.15
SMG1-203ENST00000532700 TDRD3Q9H7E2 651 aaKnown RBP22.25■■□□□ 1.15
SMG1-203ENST00000532700 VEZTQ9HBM0 779 aa22.25■■□□□ 1.15
SMG1-203ENST00000532700 LAMB1P07942 1786 aa22.25■■□□□ 1.15
SMG1-203ENST00000532700 ADORA1P30542 326 aa22.24■■□□□ 1.15
SMG1-203ENST00000532700 MKRN3Q13064 507 aaKnown RBP22.24■■□□□ 1.15
SMG1-203ENST00000532700 TTLL12Q14166 644 aaPredicted RBP22.24■■□□□ 1.15
SMG1-203ENST00000532700 VPS37DQ86XT2 251 aa22.24■■□□□ 1.15
SMG1-203ENST00000532700 CIAO1O76071 339 aa22.23■■□□□ 1.15
SMG1-203ENST00000532700 CRKP46108 304 aa22.23■■□□□ 1.15
SMG1-203ENST00000532700 SPDYE2Q495Y8 402 aa22.23■■□□□ 1.15
SMG1-203ENST00000532700 CAVIN4Q5BKX8 364 aa22.23■■□□□ 1.15
SMG1-203ENST00000532700 NBPF12Q5TAG4 269 aaPredicted RBP22.23■■□□□ 1.15
SMG1-203ENST00000532700 DZIP1LQ8IYY4 767 aaKnown RBP22.23■■□□□ 1.15
SMG1-203ENST00000532700 TMEM57Q8N5G2 664 aa22.23■■□□□ 1.15
SMG1-203ENST00000532700 ZNF70Q9UC06 446 aaPredicted RBP22.23■■□□□ 1.15
SMG1-203ENST00000532700 IFIT1P09914 478 aaKnown RBP22.22■■□□□ 1.15
SMG1-203ENST00000532700 CACNB3P54284 484 aa22.22■■□□□ 1.15
SMG1-203ENST00000532700 ATP2B3Q16720 1220 aa22.22■■□□□ 1.15
SMG1-203ENST00000532700 LPIN2Q92539 896 aa22.22■■□□□ 1.15
SMG1-203ENST00000532700 CLMNQ96JQ2 1002 aa22.22■■□□□ 1.15
SMG1-203ENST00000532700 COPRSQ9NQ92 184 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms