RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 DPYSL4O14531 572 aa15.42■□□□□ 0.06
COPB1-208ENST00000532088 SASH1O94885 1247 aa15.42■□□□□ 0.06
COPB1-208ENST00000532088 ATP2B4P23634 1241 aa15.42■□□□□ 0.06
COPB1-208ENST00000532088 UBE4AQ14139 1066 aa15.42■□□□□ 0.06
COPB1-208ENST00000532088 DOK7Q18PE1 504 aa15.42■□□□□ 0.06
COPB1-208ENST00000532088 RTFDC1Q9BY42 306 aaPredicted RBP15.42■□□□□ 0.06
COPB1-208ENST00000532088 LRRCC1Q9C099 1032 aa15.42■□□□□ 0.06
COPB1-208ENST00000532088 FGFR2P21802 821 aa15.41■□□□□ 0.06
COPB1-208ENST00000532088 PUM3Q15397 648 aaKnown RBP15.41■□□□□ 0.06
COPB1-208ENST00000532088 C15orf52Q6ZUT6 534 aaKnown RBP15.41■□□□□ 0.06
COPB1-208ENST00000532088 MPNDQ8N594 471 aa15.41■□□□□ 0.06
COPB1-208ENST00000532088 VPS33BQ9H267 617 aa15.41■□□□□ 0.06
COPB1-208ENST00000532088 SNPHO15079 494 aa15.4■□□□□ 0.06
COPB1-208ENST00000532088 C21orf2O43822 256 aa15.4■□□□□ 0.06
COPB1-208ENST00000532088 MAP3K9P80192 1104 aa15.4■□□□□ 0.06
COPB1-208ENST00000532088 GPSM2P81274 684 aa15.4■□□□□ 0.06
COPB1-208ENST00000532088 TFCP2Q12800 502 aa15.4■□□□□ 0.06
COPB1-208ENST00000532088 NBR1Q14596 966 aa15.4■□□□□ 0.06
COPB1-208ENST00000532088 CLASRPQ8N2M8 674 aaKnown RBP15.4■□□□□ 0.06
COPB1-208ENST00000532088 SUPT20HQ8NEM7 779 aa15.4■□□□□ 0.06
COPB1-208ENST00000532088 PSMD1Q99460 953 aa15.4■□□□□ 0.06
COPB1-208ENST00000532088 GGA1Q9UJY5 639 aa15.4■□□□□ 0.06
COPB1-208ENST00000532088 BCS1LQ9Y276 419 aa15.4■□□□□ 0.06
COPB1-208ENST00000532088 LTBP3Q9NS15 1303 aa15.4■□□□□ 0.06
COPB1-208ENST00000532088 DPP8Q6V1X1 898 aaPredicted RBP15.39■□□□□ 0.05
COPB1-208ENST00000532088 LPIN2Q92539 896 aa15.39■□□□□ 0.05
COPB1-208ENST00000532088 ANKIB1Q9P2G1 1089 aa15.39■□□□□ 0.05
COPB1-208ENST00000532088 NSFL1CQ9UNZ2 370 aaKnown RBP15.39■□□□□ 0.05
COPB1-208ENST00000532088 ZNF609O15014 1411 aa15.39■□□□□ 0.05
COPB1-208ENST00000532088 DUOX1Q9NRD9 1551 aa15.39■□□□□ 0.05
COPB1-208ENST00000532088 ZNF804BA4D1E1 1349 aa15.39■□□□□ 0.05
COPB1-208ENST00000532088 TBC1D12O60347 775 aa15.38■□□□□ 0.05
COPB1-208ENST00000532088 FKBP4Q02790 459 aaKnown RBP eCLIP15.38■□□□□ 0.05
COPB1-208ENST00000532088 NUCB1Q02818 461 aa15.38■□□□□ 0.05
COPB1-208ENST00000532088 TNNI3KQ59H18 835 aa15.38■□□□□ 0.05
COPB1-208ENST00000532088 TBC1D16Q8TBP0 767 aa15.38■□□□□ 0.05
COPB1-208ENST00000532088 EYA3Q99504 573 aa15.38■□□□□ 0.05
COPB1-208ENST00000532088 FPGT-TNNI3KV9GXZ4 949 aa15.38■□□□□ 0.05
COPB1-208ENST00000532088 FER1L6Q2WGJ9 1857 aa15.37■□□□□ 0.05
COPB1-208ENST00000532088 MED23Q9ULK4 1368 aa15.37■□□□□ 0.05
COPB1-208ENST00000532088 ARAP2Q8WZ64 1704 aa15.37■□□□□ 0.05
COPB1-208ENST00000532088 SPDYE16A6NNV3 312 aaPredicted RBP15.37■□□□□ 0.05
COPB1-208ENST00000532088 IFIT1P09914 478 aaKnown RBP15.37■□□□□ 0.05
COPB1-208ENST00000532088 SLC5A1P13866 664 aa15.37■□□□□ 0.05
COPB1-208ENST00000532088 KCNJ4P48050 445 aa15.37■□□□□ 0.05
COPB1-208ENST00000532088 ATP2B3Q16720 1220 aa15.37■□□□□ 0.05
COPB1-208ENST00000532088 ANKRD45Q5TZF3 282 aa15.37■□□□□ 0.05
COPB1-208ENST00000532088 B4GALNT3Q6L9W6 998 aa15.37■□□□□ 0.05
COPB1-208ENST00000532088 PCDHGA4Q9Y5G9 962 aa15.37■□□□□ 0.05
COPB1-208ENST00000532088 GTF3C3Q9Y5Q9 886 aa15.37■□□□□ 0.05
COPB1-208ENST00000532088 A0A1B0GUL7 405 aa15.36■□□□□ 0.05
COPB1-208ENST00000532088 TAF5LO75529 589 aa15.36■□□□□ 0.05
COPB1-208ENST00000532088 UFL1O94874 794 aa15.36■□□□□ 0.05
COPB1-208ENST00000532088 CHD1LQ86WJ1 897 aa15.36■□□□□ 0.05
COPB1-208ENST00000532088 HELBQ8NG08 1087 aaPredicted RBP15.36■□□□□ 0.05
COPB1-208ENST00000532088 ZSWIM6Q9HCJ5 1215 aa15.36■□□□□ 0.05
COPB1-208ENST00000532088 POLLQ9UGP5 575 aa15.36■□□□□ 0.05
COPB1-208ENST00000532088 IRS2Q9Y4H2 1338 aa15.36■□□□□ 0.05
COPB1-208ENST00000532088 GRIN3BO60391 1043 aa15.35■□□□□ 0.05
COPB1-208ENST00000532088 OLFM4Q6UX06 510 aa15.35■□□□□ 0.05
COPB1-208ENST00000532088 EAF2Q96CJ1 260 aaPredicted RBP15.35■□□□□ 0.05
COPB1-208ENST00000532088 TAOK3Q9H2K8 898 aa15.35■□□□□ 0.05
COPB1-208ENST00000532088 APBB1O00213 710 aa15.34■□□□□ 0.05
COPB1-208ENST00000532088 RIMBP2O15034 1052 aa15.34■□□□□ 0.05
COPB1-208ENST00000532088 AACSQ86V21 672 aa15.34■□□□□ 0.05
COPB1-208ENST00000532088 IL1RAPL2Q9NP60 686 aa15.34■□□□□ 0.05
COPB1-208ENST00000532088 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.34■□□□□ 0.05
COPB1-208ENST00000532088 C6orf229H3BNL8 230 aa15.33■□□□□ 0.04
COPB1-208ENST00000532088 NFKBIEO00221 500 aa15.33■□□□□ 0.04
COPB1-208ENST00000532088 IFIT2P09913 472 aaKnown RBP15.33■□□□□ 0.04
COPB1-208ENST00000532088 YBX3P16989 372 aaKnown RBP eCLIP15.33■□□□□ 0.04
COPB1-208ENST00000532088 KIAA2012Q0VF49 1180 aa15.33■□□□□ 0.04
COPB1-208ENST00000532088 WASHC4Q2M389 1173 aa15.33■□□□□ 0.04
COPB1-208ENST00000532088 CAVIN4Q5BKX8 364 aa15.33■□□□□ 0.04
COPB1-208ENST00000532088 SLC51AQ86UW1 340 aa15.33■□□□□ 0.04
COPB1-208ENST00000532088 XAGE2Q96GT9 111 aa15.33■□□□□ 0.04
COPB1-208ENST00000532088 ZNF512BQ96KM6 892 aaPredicted RBP15.33■□□□□ 0.04
COPB1-208ENST00000532088 ZC3H12CQ9C0D7 883 aaKnown RBP15.33■□□□□ 0.04
COPB1-208ENST00000532088 SMARCA5O60264 1052 aaPredicted RBP15.32■□□□□ 0.04
COPB1-208ENST00000532088 TIMM10P62072 90 aa15.32■□□□□ 0.04
COPB1-208ENST00000532088 FBXO33Q7Z6M2 555 aa15.32■□□□□ 0.04
COPB1-208ENST00000532088 COA1Q9GZY4 146 aa15.32■□□□□ 0.04
COPB1-208ENST00000532088 DBNLQ9UJU6 430 aaKnown RBP15.32■□□□□ 0.04
COPB1-208ENST00000532088 TTC41PQ6P2S7 1318 aa15.32■□□□□ 0.04
COPB1-208ENST00000532088 SALL3Q9BXA9 1300 aa15.32■□□□□ 0.04
COPB1-208ENST00000532088 SEMA3EO15041 775 aa15.31■□□□□ 0.04
COPB1-208ENST00000532088 UQCRFS1P1P0C7P4 283 aa15.31■□□□□ 0.04
COPB1-208ENST00000532088 IARSP41252 1262 aaKnown RBP15.31■□□□□ 0.04
COPB1-208ENST00000532088 GPR162Q16538 588 aa15.31■□□□□ 0.04
COPB1-208ENST00000532088 CCDC158Q5M9N0 1113 aa15.31■□□□□ 0.04
COPB1-208ENST00000532088 GPR153Q6NV75 609 aa15.31■□□□□ 0.04
COPB1-208ENST00000532088 ZNF804AQ7Z570 1209 aa15.31■□□□□ 0.04
COPB1-208ENST00000532088 ZNF710Q8N1W2 664 aa15.31■□□□□ 0.04
COPB1-208ENST00000532088 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.31■□□□□ 0.04
COPB1-208ENST00000532088 GPATCH3Q96I76 525 aa15.31■□□□□ 0.04
COPB1-208ENST00000532088 FAM84BQ96KN1 310 aaPredicted RBP15.31■□□□□ 0.04
COPB1-208ENST00000532088 NEUROD6Q96NK8 337 aa15.31■□□□□ 0.04
COPB1-208ENST00000532088 DBNDD2Q9BQY9 259 aa15.31■□□□□ 0.04
COPB1-208ENST00000532088 LNPKQ9C0E8 428 aa15.31■□□□□ 0.04
COPB1-208ENST00000532088 STAP2Q9UGK3 403 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms