RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 DGKGP49619 791 aa6.38□□□□□ -1.39
ECHDC1-222ENST00000531967 PDXDC2PQ6P474 469 aa6.38□□□□□ -1.39
ECHDC1-222ENST00000531967 PI16Q6UXB8 463 aa6.38□□□□□ -1.39
ECHDC1-222ENST00000531967 FAM169BQ8N8A8 192 aa6.38□□□□□ -1.39
ECHDC1-222ENST00000531967 ABTB2Q8N961 1025 aa6.38□□□□□ -1.39
ECHDC1-222ENST00000531967 ADAM32Q8TC27 787 aa6.38□□□□□ -1.39
ECHDC1-222ENST00000531967 JPH3Q8WXH2 748 aaPredicted RBP6.38□□□□□ -1.39
ECHDC1-222ENST00000531967 CAMKK2Q96RR4 588 aa6.38□□□□□ -1.39
ECHDC1-222ENST00000531967 MYCBPQ99417 103 aaPredicted RBP6.38□□□□□ -1.39
ECHDC1-222ENST00000531967 FAM13BQ9NYF5 915 aa6.38□□□□□ -1.39
ECHDC1-222ENST00000531967 PFDN2Q9UHV9 154 aa6.38□□□□□ -1.39
ECHDC1-222ENST00000531967 FAM133BQ5BKY9 247 aaKnown RBP6.37□□□□□ -1.39
ECHDC1-222ENST00000531967 C1orf53Q5VUE5 145 aa6.37□□□□□ -1.39
ECHDC1-222ENST00000531967 PCNX4Q63HM2 1172 aa6.37□□□□□ -1.39
ECHDC1-222ENST00000531967 CFAP161Q6P656 301 aa6.37□□□□□ -1.39
ECHDC1-222ENST00000531967 PASD1Q8IV76 773 aa6.37□□□□□ -1.39
ECHDC1-222ENST00000531967 CHCHD4Q8N4Q1 142 aa6.37□□□□□ -1.39
ECHDC1-222ENST00000531967 ZNF454Q8N9F8 522 aa6.37□□□□□ -1.39
ECHDC1-222ENST00000531967 MTMR8Q96EF0 704 aa6.37□□□□□ -1.39
ECHDC1-222ENST00000531967 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.37□□□□□ -1.39
ECHDC1-222ENST00000531967 EIF4A3P38919 411 aaKnown RBP6.37□□□□□ -1.39
ECHDC1-222ENST00000531967 MSL1Q68DK7 614 aa6.37□□□□□ -1.39
ECHDC1-222ENST00000531967 LVRNQ6Q4G3 990 aa6.37□□□□□ -1.39
ECHDC1-222ENST00000531967 SKAP1Q86WV1 359 aa6.37□□□□□ -1.39
ECHDC1-222ENST00000531967 CHMP4CQ96CF2 233 aa6.37□□□□□ -1.39
ECHDC1-222ENST00000531967 ELAC2Q9BQ52 826 aaKnown RBP6.37□□□□□ -1.39
ECHDC1-222ENST00000531967 RSRP1Q9BUV0 290 aa6.37□□□□□ -1.39
ECHDC1-222ENST00000531967 PLCB1Q9NQ66 1216 aa6.37□□□□□ -1.39
ECHDC1-222ENST00000531967 CHMP3Q9Y3E7 222 aa6.37□□□□□ -1.39
ECHDC1-222ENST00000531967 MORC2Q9Y6X9 1032 aaPredicted RBP6.37□□□□□ -1.39
ECHDC1-222ENST00000531967 MTA2O94776 668 aa6.36□□□□□ -1.39
ECHDC1-222ENST00000531967 RHOBTB3O94955 611 aa6.36□□□□□ -1.39
ECHDC1-222ENST00000531967 DNM1Q05193 864 aaKnown RBP6.36□□□□□ -1.39
ECHDC1-222ENST00000531967 SEPT6Q14141 434 aa6.36□□□□□ -1.39
ECHDC1-222ENST00000531967 FAM26DQ5JW98 314 aa6.36□□□□□ -1.39
ECHDC1-222ENST00000531967 C16orf54Q6UWD8 224 aa6.36□□□□□ -1.39
ECHDC1-222ENST00000531967 RASSF3Q86WH2 238 aa6.36□□□□□ -1.39
ECHDC1-222ENST00000531967 SEZ6LQ9BYH1 1024 aa6.36□□□□□ -1.39
ECHDC1-222ENST00000531967 RIC8AQ9NPQ8 531 aa6.36□□□□□ -1.39
ECHDC1-222ENST00000531967 ZNF358Q9NW07 568 aa6.36□□□□□ -1.39
ECHDC1-222ENST00000531967 ATAD2Q6PL18 1390 aa6.36□□□□□ -1.39
ECHDC1-222ENST00000531967 F6X3S4 739 aa6.36□□□□□ -1.39
ECHDC1-222ENST00000531967 TNFRSF21O75509 655 aa6.36□□□□□ -1.39
ECHDC1-222ENST00000531967 DDIT3P35638 169 aa6.36□□□□□ -1.39
ECHDC1-222ENST00000531967 ITKQ08881 620 aa6.36□□□□□ -1.39
ECHDC1-222ENST00000531967 NEXNQ0ZGT2 675 aa6.36□□□□□ -1.39
ECHDC1-222ENST00000531967 USP4Q13107 963 aa6.36□□□□□ -1.39
ECHDC1-222ENST00000531967 TAF11Q15544 211 aa6.36□□□□□ -1.39
ECHDC1-222ENST00000531967 JAKMIP3Q5VZ66 844 aa6.36□□□□□ -1.39
ECHDC1-222ENST00000531967 SPATC1Q76KD6 591 aa6.36□□□□□ -1.39
ECHDC1-222ENST00000531967 ZBTB46Q86UZ6 589 aa6.36□□□□□ -1.39
ECHDC1-222ENST00000531967 RELL1Q8IUW5 271 aa6.36□□□□□ -1.39
ECHDC1-222ENST00000531967 RIN3Q8TB24 985 aa6.36□□□□□ -1.39
ECHDC1-222ENST00000531967 CHMP7Q8WUX9 453 aaPredicted RBP6.36□□□□□ -1.39
ECHDC1-222ENST00000531967 PGBD4Q96DM1 585 aa6.36□□□□□ -1.39
ECHDC1-222ENST00000531967 NUDT12Q9BQG2 462 aa6.36□□□□□ -1.39
ECHDC1-222ENST00000531967 YIPF4Q9BSR8 244 aa6.36□□□□□ -1.39
ECHDC1-222ENST00000531967 ACAD8Q9UKU7 415 aa6.36□□□□□ -1.39
ECHDC1-222ENST00000531967 KDM4FA0A1W2PPD8 638 aa6.35□□□□□ -1.39
ECHDC1-222ENST00000531967 MINDY4BA8MYZ0 360 aa6.35□□□□□ -1.39
ECHDC1-222ENST00000531967 RFPL1O75677 317 aa6.35□□□□□ -1.39
ECHDC1-222ENST00000531967 PGRP06401 933 aa6.35□□□□□ -1.39
ECHDC1-222ENST00000531967 TYRP1P17643 537 aa6.35□□□□□ -1.39
ECHDC1-222ENST00000531967 COL9A1P20849 921 aa6.35□□□□□ -1.39
ECHDC1-222ENST00000531967 ZBED6P86452 979 aa6.35□□□□□ -1.39
ECHDC1-222ENST00000531967 NUCB1Q02818 461 aa6.35□□□□□ -1.39
ECHDC1-222ENST00000531967 DDX10Q13206 875 aaKnown RBP6.35□□□□□ -1.39
ECHDC1-222ENST00000531967 BIRC3Q13489 604 aa6.35□□□□□ -1.39
ECHDC1-222ENST00000531967 CCDC81Q6ZN84 652 aa6.35□□□□□ -1.39
ECHDC1-222ENST00000531967 TOGARAM2Q6ZUX3 1019 aa6.35□□□□□ -1.39
ECHDC1-222ENST00000531967 ZNF296Q8WUU4 475 aaPredicted RBP6.35□□□□□ -1.39
ECHDC1-222ENST00000531967 TRIM52Q96A61 297 aa6.35□□□□□ -1.39
ECHDC1-222ENST00000531967 NOC4LQ9BVI4 516 aaKnown RBP6.35□□□□□ -1.39
ECHDC1-222ENST00000531967 NT5C1AQ9BXI3 368 aa6.35□□□□□ -1.39
ECHDC1-222ENST00000531967 CCDC8Q9H0W5 538 aaPredicted RBP6.35□□□□□ -1.39
ECHDC1-222ENST00000531967 CSRNP2Q9H175 543 aa6.35□□□□□ -1.39
ECHDC1-222ENST00000531967 CNNM2Q9H8M5 875 aa6.35□□□□□ -1.39
ECHDC1-222ENST00000531967 STRN4Q9NRL3 753 aa6.35□□□□□ -1.39
ECHDC1-222ENST00000531967 ACTR10Q9NZ32 417 aa6.35□□□□□ -1.39
ECHDC1-222ENST00000531967 GTF2IRD1Q9UHL9 959 aa6.35□□□□□ -1.39
ECHDC1-222ENST00000531967 GSG1L2A8MUP6 293 aa6.35□□□□□ -1.39
ECHDC1-222ENST00000531967 SNX2O60749 519 aa6.35□□□□□ -1.39
ECHDC1-222ENST00000531967 EYA4O95677 639 aa6.35□□□□□ -1.39
ECHDC1-222ENST00000531967 PDGFAP04085 211 aa6.35□□□□□ -1.39
ECHDC1-222ENST00000531967 ATICP31939 592 aa6.35□□□□□ -1.39
ECHDC1-222ENST00000531967 RENBPP51606 427 aa6.35□□□□□ -1.39
ECHDC1-222ENST00000531967 POTEEQ6S8J3 1075 aa6.35□□□□□ -1.39
ECHDC1-222ENST00000531967 MAATS1Q7Z4T9 603 aa6.35□□□□□ -1.39
ECHDC1-222ENST00000531967 NECAB2Q7Z6G3 386 aa6.35□□□□□ -1.39
ECHDC1-222ENST00000531967 PI4K2BQ8TCG2 481 aa6.35□□□□□ -1.39
ECHDC1-222ENST00000531967 GOLGA1Q92805 767 aa6.35□□□□□ -1.39
ECHDC1-222ENST00000531967 RHOBTB2Q9BYZ6 727 aa6.35□□□□□ -1.39
ECHDC1-222ENST00000531967 PRDM11Q9NQV5 511 aa6.35□□□□□ -1.39
ECHDC1-222ENST00000531967 IGF1RP08069 1367 aa6.35□□□□□ -1.39
ECHDC1-222ENST00000531967 ANO9A1A5B4 782 aa6.34□□□□□ -1.39
ECHDC1-222ENST00000531967 SMAPO00193 183 aa6.34□□□□□ -1.39
ECHDC1-222ENST00000531967 TNFAIP3P21580 790 aa6.34□□□□□ -1.39
ECHDC1-222ENST00000531967 CLK1P49759 484 aaKnown RBP6.34□□□□□ -1.39
ECHDC1-222ENST00000531967 CASP7P55210 303 aa6.34□□□□□ -1.39
ECHDC1-222ENST00000531967 SSRP1Q08945 709 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms