RNA–Protein interactions for RNA: ENST00000531872.5

NXF1-212, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 390 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-212ENST00000531872 MBIPQ9NS73 344 aa10.08□□□□□ -0.8
NXF1-212ENST00000531872 PTCH2Q9Y6C5 1203 aa10.08□□□□□ -0.8
NXF1-212ENST00000531872 SPEF2Q9C093 1822 aa10.07□□□□□ -0.8
NXF1-212ENST00000531872 MYH3P11055 1940 aa10.07□□□□□ -0.8
NXF1-212ENST00000531872 IGKV5-2P06315 115 aa10.07□□□□□ -0.8
NXF1-212ENST00000531872 ARHGEF6Q15052 776 aa10.07□□□□□ -0.8
NXF1-212ENST00000531872 SLC4A8Q2Y0W8 1093 aa10.07□□□□□ -0.8
NXF1-212ENST00000531872 RUNDC1Q96C34 613 aa10.07□□□□□ -0.8
NXF1-212ENST00000531872 MS4A4AQ96JQ5 239 aa10.07□□□□□ -0.8
NXF1-212ENST00000531872 ANKRD2Q9GZV1 360 aa10.07□□□□□ -0.8
NXF1-212ENST00000531872 CD209Q9NNX6 404 aa10.07□□□□□ -0.8
NXF1-212ENST00000531872 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.07□□□□□ -0.8
NXF1-212ENST00000531872 PCDHAC2Q9Y5I4 1007 aa10.07□□□□□ -0.8
NXF1-212ENST00000531872 IRS2Q9Y4H2 1338 aa10.07□□□□□ -0.8
NXF1-212ENST00000531872 COL6A3P12111 3177 aa10.06□□□□□ -0.8
NXF1-212ENST00000531872 CLRN2A0PK11 232 aa10.06□□□□□ -0.8
NXF1-212ENST00000531872 SPDYE2BA6NHP3 402 aa10.06□□□□□ -0.8
NXF1-212ENST00000531872 DDX58O95786 925 aaKnown RBP10.06□□□□□ -0.8
NXF1-212ENST00000531872 SPDYE6P0CI01 402 aa10.06□□□□□ -0.8
NXF1-212ENST00000531872 IGHMBP2P38935 993 aaKnown RBP10.06□□□□□ -0.8
NXF1-212ENST00000531872 CFAP100Q494V2 611 aa10.06□□□□□ -0.8
NXF1-212ENST00000531872 OPTNQ96CV9 577 aa10.06□□□□□ -0.8
NXF1-212ENST00000531872 PRMT6Q96LA8 375 aaPredicted RBP10.06□□□□□ -0.8
NXF1-212ENST00000531872 MAP3K2Q9Y2U5 619 aa10.06□□□□□ -0.8
NXF1-212ENST00000531872 A0A0C4DFX4 3053 aa10.06□□□□□ -0.8
NXF1-212ENST00000531872 LAMA3Q16787 3333 aa10.06□□□□□ -0.8
NXF1-212ENST00000531872 AOX1Q06278 1338 aa10.06□□□□□ -0.8
NXF1-212ENST00000531872 OTOFQ9HC10 1997 aa10.05□□□□□ -0.8
NXF1-212ENST00000531872 MYO1BO43795 1136 aa10.05□□□□□ -0.8
NXF1-212ENST00000531872 FKBP1AP62942 108 aaKnown RBP10.05□□□□□ -0.8
NXF1-212ENST00000531872 RASA3Q14644 834 aa10.05□□□□□ -0.8
NXF1-212ENST00000531872 RALBP1Q15311 655 aa10.05□□□□□ -0.8
NXF1-212ENST00000531872 KSR2Q6VAB6 950 aa10.05□□□□□ -0.8
NXF1-212ENST00000531872 CHRDL2Q6WN34 429 aa10.05□□□□□ -0.8
NXF1-212ENST00000531872 C15orf52Q6ZUT6 534 aaKnown RBP10.05□□□□□ -0.8
NXF1-212ENST00000531872 BRI3BPQ8WY22 251 aa10.05□□□□□ -0.8
NXF1-212ENST00000531872 PLA2G12BQ9BX93 195 aa10.05□□□□□ -0.8
NXF1-212ENST00000531872 ELP3Q9H9T3 547 aa10.05□□□□□ -0.8
NXF1-212ENST00000531872 ZFYVE28Q9HCC9 887 aa10.05□□□□□ -0.8
NXF1-212ENST00000531872 PI4KAP2A4QPH2 592 aa10.04□□□□□ -0.8
NXF1-212ENST00000531872 H7C1W4 665 aa10.04□□□□□ -0.8
NXF1-212ENST00000531872 ELL2O00472 640 aaPredicted RBP10.04□□□□□ -0.8
NXF1-212ENST00000531872 DLL1O00548 723 aa10.04□□□□□ -0.8
NXF1-212ENST00000531872 CSF1RP07333 972 aa10.04□□□□□ -0.8
NXF1-212ENST00000531872 IL1R1P14778 569 aa10.04□□□□□ -0.8
NXF1-212ENST00000531872 ITGA6P23229 1130 aa10.04□□□□□ -0.8
NXF1-212ENST00000531872 CHRNDQ07001 517 aa10.04□□□□□ -0.8
NXF1-212ENST00000531872 TAF1CQ15572 869 aaPredicted RBP10.04□□□□□ -0.8
NXF1-212ENST00000531872 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.04□□□□□ -0.8
NXF1-212ENST00000531872 PI4KAP1Q8N8J0 262 aa10.04□□□□□ -0.8
NXF1-212ENST00000531872 PRO3102Q9H379 93 aa10.04□□□□□ -0.8
NXF1-212ENST00000531872 VEZTQ9HBM0 779 aa10.04□□□□□ -0.8
NXF1-212ENST00000531872 IFT57Q9NWB7 429 aa10.04□□□□□ -0.8
NXF1-212ENST00000531872 RBM27Q9P2N5 1060 aaKnown RBP10.04□□□□□ -0.8
NXF1-212ENST00000531872 CCL15-CCL14A0A0B4J2E2 113 aa10.03□□□□□ -0.8
NXF1-212ENST00000531872 NEURL1BA8MQ27 555 aa10.03□□□□□ -0.8
NXF1-212ENST00000531872 F8W031 263 aaPredicted RBP10.03□□□□□ -0.8
NXF1-212ENST00000531872 SNAP23O00161 211 aa10.03□□□□□ -0.8
NXF1-212ENST00000531872 GTF2A2P52657 109 aa10.03□□□□□ -0.8
NXF1-212ENST00000531872 GNAI1P63096 354 aa10.03□□□□□ -0.8
NXF1-212ENST00000531872 CCL15Q16663 113 aa10.03□□□□□ -0.8
NXF1-212ENST00000531872 CWF19L2Q2TBE0 894 aaKnown RBP10.03□□□□□ -0.8
NXF1-212ENST00000531872 CCDC30Q5VVM6 783 aa10.03□□□□□ -0.8
NXF1-212ENST00000531872 FAM43AQ8N2R8 423 aa10.03□□□□□ -0.8
NXF1-212ENST00000531872 C8orf58Q8NAV2 365 aa10.03□□□□□ -0.8
NXF1-212ENST00000531872 SH3TC2Q8TF17 1288 aa10.03□□□□□ -0.8
NXF1-212ENST00000531872 SHISA4Q96DD7 197 aa10.03□□□□□ -0.8
NXF1-212ENST00000531872 TEPSINQ96N21 525 aa10.03□□□□□ -0.8
NXF1-212ENST00000531872 MPHOSPH8Q99549 860 aa10.03□□□□□ -0.8
NXF1-212ENST00000531872 CHMP4AQ9BY43 222 aa10.03□□□□□ -0.8
NXF1-212ENST00000531872 TLR2O60603 784 aa10.02□□□□□ -0.81
NXF1-212ENST00000531872 MYCP01106 439 aaPredicted RBP10.02□□□□□ -0.81
NXF1-212ENST00000531872 GNRH1P01148 92 aa10.02□□□□□ -0.81
NXF1-212ENST00000531872 KCNJ4P48050 445 aa10.02□□□□□ -0.81
NXF1-212ENST00000531872 CASP7P55210 303 aa10.02□□□□□ -0.81
NXF1-212ENST00000531872 PRMT2P55345 433 aa10.02□□□□□ -0.81
NXF1-212ENST00000531872 LACTBP83111 547 aaPredicted RBP10.02□□□□□ -0.81
NXF1-212ENST00000531872 NEXNQ0ZGT2 675 aa10.02□□□□□ -0.81
NXF1-212ENST00000531872 TNFAIP1Q13829 316 aa10.02□□□□□ -0.81
NXF1-212ENST00000531872 SPDYE2Q495Y8 402 aa10.02□□□□□ -0.81
NXF1-212ENST00000531872 UBE3BQ7Z3V4 1068 aa10.02□□□□□ -0.81
NXF1-212ENST00000531872 UBE2Q1Q7Z7E8 422 aa10.02□□□□□ -0.81
NXF1-212ENST00000531872 SLC17A8Q8NDX2 589 aa10.02□□□□□ -0.81
NXF1-212ENST00000531872 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.02□□□□□ -0.81
NXF1-212ENST00000531872 ARHGAP39Q9C0H5 1083 aa10.02□□□□□ -0.81
NXF1-212ENST00000531872 ZCCHC17Q9NP64 241 aaKnown RBP10.02□□□□□ -0.81
NXF1-212ENST00000531872 ZSWIM8A7E2V4 1837 aa10.01□□□□□ -0.81
NXF1-212ENST00000531872 TAF5LO75529 589 aa10.01□□□□□ -0.81
NXF1-212ENST00000531872 MAP3K9P80192 1104 aa10.01□□□□□ -0.81
NXF1-212ENST00000531872 MAPK8IP2Q13387 824 aaPredicted RBP10.01□□□□□ -0.81
NXF1-212ENST00000531872 VGLL4Q14135 290 aa10.01□□□□□ -0.81
NXF1-212ENST00000531872 MTFR1Q15390 333 aa10.01□□□□□ -0.81
NXF1-212ENST00000531872 ZNF804AQ7Z570 1209 aa10.01□□□□□ -0.81
NXF1-212ENST00000531872 CDAN1Q8IWY9 1227 aa10.01□□□□□ -0.81
NXF1-212ENST00000531872 ZNF70Q9UC06 446 aaPredicted RBP10.01□□□□□ -0.81
NXF1-212ENST00000531872 ADAMTS8Q9UP79 889 aa10.01□□□□□ -0.81
NXF1-212ENST00000531872 SPDYE5A6NIY4 337 aa10□□□□□ -0.81
NXF1-212ENST00000531872 RBM5P52756 815 aaKnown RBP eCLIP10□□□□□ -0.81
NXF1-212ENST00000531872 GCKRQ14397 625 aa10□□□□□ -0.81
NXF1-212ENST00000531872 KIF22Q14807 665 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms