RNA–Protein interactions for RNA: ENST00000531558.1

PICALM-215, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-215	ENST00000531558	CNTROB	Q8N137	903 aa		31.95	■■■□□ 2.71
PICALM-215	ENST00000531558	PGAP2	Q9UHJ9	254 aa		31.94	■■■□□ 2.7
PICALM-215	ENST00000531558	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	31.94	■■■□□ 2.7
PICALM-215	ENST00000531558	AKAP2	Q9Y2D5	859 aa		31.94	■■■□□ 2.7
PICALM-215	ENST00000531558	NOP58	Q9Y2X3	529 aa	Known RBP	31.94	■■■□□ 2.7
PICALM-215	ENST00000531558	SURF6	O75683	361 aa	Known RBP	31.93	■■■□□ 2.7
PICALM-215	ENST00000531558	ITGBL1	O95965	494 aa	Predicted RBP	31.93	■■■□□ 2.7
PICALM-215	ENST00000531558	KIAA0825	Q8IV33	1275 aa		31.93	■■■□□ 2.7
PICALM-215	ENST00000531558	OGFOD1	Q8N543	542 aa		31.93	■■■□□ 2.7
PICALM-215	ENST00000531558	MYOZ2	Q9NPC6	264 aa		31.93	■■■□□ 2.7
PICALM-215	ENST00000531558	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	31.93	■■■□□ 2.7
PICALM-215	ENST00000531558	MMP14	P50281	582 aa		31.92	■■■□□ 2.7
PICALM-215	ENST00000531558	OS9	Q13438	667 aa	Predicted RBP	31.92	■■■□□ 2.7
PICALM-215	ENST00000531558	RPAP2	Q8IXW5	612 aa	Predicted RBP	31.92	■■■□□ 2.7
PICALM-215	ENST00000531558	PASK	Q96RG2	1323 aa		31.92	■■■□□ 2.7
PICALM-215	ENST00000531558		A0A1B0GUL7	405 aa		31.91	■■■□□ 2.7
PICALM-215	ENST00000531558	FRAT2	O75474	233 aa	Predicted RBP	31.91	■■■□□ 2.7
PICALM-215	ENST00000531558	APLP1	P51693	650 aa		31.91	■■■□□ 2.7
PICALM-215	ENST00000531558	ARAP2	Q8WZ64	1704 aa		31.9	■■■□□ 2.7
PICALM-215	ENST00000531558	ADORA1	P30542	326 aa		31.9	■■■□□ 2.7
PICALM-215	ENST00000531558	MFSD14B	Q5SR56	506 aa		31.9	■■■□□ 2.7
PICALM-215	ENST00000531558	HDAC9	Q9UKV0	1011 aa		31.9	■■■□□ 2.7
PICALM-215	ENST00000531558	TIMM10	P62072	90 aa		31.89	■■■□□ 2.7
PICALM-215	ENST00000531558	CHAF1A	Q13111	956 aa	Predicted RBP	31.89	■■■□□ 2.7
PICALM-215	ENST00000531558	SIRT2	Q8IXJ6	389 aa		31.88	■■■□□ 2.69
PICALM-215	ENST00000531558	CEP350	Q5VT06	3117 aa		31.88	■■■□□ 2.69
PICALM-215	ENST00000531558	HMMR	O75330	724 aa		31.87	■■■□□ 2.69
PICALM-215	ENST00000531558	GNL3L	Q9NVN8	582 aa	Known RBP	31.87	■■■□□ 2.69
PICALM-215	ENST00000531558	PHKA1	P46020	1223 aa		31.86	■■■□□ 2.69
PICALM-215	ENST00000531558	TBC1D22A	Q8WUA7	517 aa		31.86	■■■□□ 2.69
PICALM-215	ENST00000531558	XAGE2	Q96GT9	111 aa		31.86	■■■□□ 2.69
PICALM-215	ENST00000531558	COL1A1	P02452	1464 aa	Predicted RBP	31.85	■■■□□ 2.69
PICALM-215	ENST00000531558		F8W031	263 aa	Predicted RBP	31.85	■■■□□ 2.69
PICALM-215	ENST00000531558	SCARF1	Q14162	830 aa		31.85	■■■□□ 2.69
PICALM-215	ENST00000531558	CCDC102B	Q68D86	513 aa		31.85	■■■□□ 2.69
PICALM-215	ENST00000531558	NEUROD6	Q96NK8	337 aa		31.85	■■■□□ 2.69
PICALM-215	ENST00000531558	GPR108	Q9NPR9	543 aa		31.85	■■■□□ 2.69
PICALM-215	ENST00000531558	GGA3	Q9NZ52	723 aa		31.85	■■■□□ 2.69
PICALM-215	ENST00000531558	ASTN2	O75129	1339 aa	Predicted RBP	31.84	■■■□□ 2.69
PICALM-215	ENST00000531558	GLIS2	Q9BZE0	524 aa	Predicted RBP	31.84	■■■□□ 2.69
PICALM-215	ENST00000531558	EXOC6B	Q9Y2D4	811 aa		31.84	■■■□□ 2.69
PICALM-215	ENST00000531558	SEMA3E	O15041	775 aa		31.83	■■■□□ 2.69
PICALM-215	ENST00000531558	ZBTB22	O15209	634 aa		31.83	■■■□□ 2.69
PICALM-215	ENST00000531558	CDC37L1	Q7L3B6	337 aa		31.83	■■■□□ 2.69
PICALM-215	ENST00000531558	TRAF5	O00463	557 aa		31.82	■■■□□ 2.68
PICALM-215	ENST00000531558	TNNI3K	Q59H18	835 aa		31.82	■■■□□ 2.68
PICALM-215	ENST00000531558	DCPS	Q96C86	337 aa	Known RBP	31.82	■■■□□ 2.68
PICALM-215	ENST00000531558	FPGT-TNNI3K	V9GXZ4	949 aa		31.82	■■■□□ 2.68
PICALM-215	ENST00000531558	WNT10B	O00744	389 aa		31.81	■■■□□ 2.68
PICALM-215	ENST00000531558	NBPF9	Q3BBW0	867 aa		31.81	■■■□□ 2.68
PICALM-215	ENST00000531558	HSP90AB4P	Q58FF6	505 aa		31.81	■■■□□ 2.68
PICALM-215	ENST00000531558	ANGEL2	Q5VTE6	544 aa	Known RBP	31.81	■■■□□ 2.68
PICALM-215	ENST00000531558	ERC1	Q8IUD2	1116 aa		31.81	■■■□□ 2.68
PICALM-215	ENST00000531558	WDR66	Q8TBY9	1149 aa		31.81	■■■□□ 2.68
PICALM-215	ENST00000531558	ZBED3	Q96IU2	234 aa	Predicted RBP	31.81	■■■□□ 2.68
PICALM-215	ENST00000531558	HTRA3	P83110	453 aa		31.8	■■■□□ 2.68
PICALM-215	ENST00000531558	KRT26	Q7Z3Y9	468 aa		31.8	■■■□□ 2.68
PICALM-215	ENST00000531558	MTMR14	Q8NCE2	650 aa		31.8	■■■□□ 2.68
PICALM-215	ENST00000531558	DENND2A	Q9ULE3	1009 aa		31.8	■■■□□ 2.68
PICALM-215	ENST00000531558	TTF2	Q9UNY4	1162 aa	Known RBP	31.8	■■■□□ 2.68
PICALM-215	ENST00000531558	FMR1	Q06787	632 aa	Known RBP eCLIP	31.79	■■■□□ 2.68	4e-8	■■■■■ 53.1
PICALM-215	ENST00000531558	DLGAP5	Q15398	846 aa		31.79	■■■□□ 2.68
PICALM-215	ENST00000531558	GRIK5	Q16478	980 aa		31.79	■■■□□ 2.68
PICALM-215	ENST00000531558	USP48	Q86UV5	1035 aa		31.79	■■■□□ 2.68
PICALM-215	ENST00000531558	PITPNM2	Q9BZ72	1349 aa		31.78	■■■□□ 2.68
PICALM-215	ENST00000531558	RASGRF1	Q13972	1273 aa		31.78	■■■□□ 2.68
PICALM-215	ENST00000531558	CFAP100	Q494V2	611 aa		31.78	■■■□□ 2.68
PICALM-215	ENST00000531558	GORAB	Q5T7V8	394 aa		31.78	■■■□□ 2.68
PICALM-215	ENST00000531558	CREBZF	Q9NS37	354 aa		31.78	■■■□□ 2.68
PICALM-215	ENST00000531558	SUGT1	Q9Y2Z0	365 aa		31.78	■■■□□ 2.68
PICALM-215	ENST00000531558	MYH13	Q9UKX3	1938 aa		31.77	■■■□□ 2.68
PICALM-215	ENST00000531558	SULF1	Q8IWU6	871 aa		31.77	■■■□□ 2.68
PICALM-215	ENST00000531558	CRBN	Q96SW2	442 aa		31.77	■■■□□ 2.68
PICALM-215	ENST00000531558	PDS5A	Q29RF7	1337 aa	Known RBP	31.76	■■■□□ 2.68
PICALM-215	ENST00000531558	TMEM88B	A6NKF7	163 aa		31.76	■■■□□ 2.67
PICALM-215	ENST00000531558	ADM5	C9JUS6	153 aa		31.76	■■■□□ 2.67
PICALM-215	ENST00000531558	SERPINA10	Q9UK55	444 aa		31.76	■■■□□ 2.67
PICALM-215	ENST00000531558	PCDHAC2	Q9Y5I4	1007 aa		31.76	■■■□□ 2.67
PICALM-215	ENST00000531558	SPDYE2B	A6NHP3	402 aa		31.75	■■■□□ 2.67
PICALM-215	ENST00000531558	SPDYE6	P0CI01	402 aa		31.75	■■■□□ 2.67
PICALM-215	ENST00000531558	DBNDD2	Q9BQY9	259 aa		31.75	■■■□□ 2.67
PICALM-215	ENST00000531558	SALL1	Q9NSC2	1324 aa		31.75	■■■□□ 2.67
PICALM-215	ENST00000531558	ARID4A	P29374	1257 aa	Predicted RBP	31.73	■■■□□ 2.67
PICALM-215	ENST00000531558	RBM5	P52756	815 aa	Known RBP eCLIP	31.73	■■■□□ 2.67
PICALM-215	ENST00000531558	DLK2	Q6UY11	383 aa		31.73	■■■□□ 2.67
PICALM-215	ENST00000531558	RHPN1	Q8TCX5	695 aa		31.73	■■■□□ 2.67
PICALM-215	ENST00000531558	EAF2	Q96CJ1	260 aa	Predicted RBP	31.73	■■■□□ 2.67
PICALM-215	ENST00000531558	MAST3	O60307	1309 aa		31.73	■■■□□ 2.67
PICALM-215	ENST00000531558	CRK	P46108	304 aa		31.72	■■■□□ 2.67
PICALM-215	ENST00000531558	HDLBP	Q00341	1268 aa	Known RBP	31.72	■■■□□ 2.67
PICALM-215	ENST00000531558	KIF1BP	Q96EK5	621 aa		31.72	■■■□□ 2.67
PICALM-215	ENST00000531558	DBNL	Q9UJU6	430 aa	Known RBP	31.72	■■■□□ 2.67
PICALM-215	ENST00000531558	RAB11FIP3	O75154	756 aa		31.71	■■■□□ 2.67
PICALM-215	ENST00000531558	CELF2	O95319	508 aa	Known RBP	31.71	■■■□□ 2.67
PICALM-215	ENST00000531558	UQCRFS1P1	P0C7P4	283 aa		31.71	■■■□□ 2.67
PICALM-215	ENST00000531558	CST9	Q5W186	159 aa		31.71	■■■□□ 2.67
PICALM-215	ENST00000531558	PRMT6	Q96LA8	375 aa	Predicted RBP	31.71	■■■□□ 2.67
PICALM-215	ENST00000531558	TLR7	Q9NYK1	1049 aa	Known RBP	31.71	■■■□□ 2.67
PICALM-215	ENST00000531558	APBB1	O00213	710 aa		31.7	■■■□□ 2.67
PICALM-215	ENST00000531558	CCDC158	Q5M9N0	1113 aa		31.7	■■■□□ 2.67

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