RNA–Protein interactions for RNA: ENST00000531546.1

CASP4-210, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 921 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-210ENST00000531546 MFSD14AQ96MC6 490 aa9.47□□□□□ -0.89
CASP4-210ENST00000531546 ATG3Q9NT62 314 aa9.47□□□□□ -0.89
CASP4-210ENST00000531546 SALL4Q9UJQ4 1053 aa9.47□□□□□ -0.89
CASP4-210ENST00000531546 ZNF777Q9ULD5 760 aaPredicted RBP9.47□□□□□ -0.89
CASP4-210ENST00000531546 MEGF11A6BM72 1044 aa9.46□□□□□ -0.9
CASP4-210ENST00000531546 ZBTB39O15060 712 aa9.46□□□□□ -0.9
CASP4-210ENST00000531546 MAP4P27816 1152 aaKnown RBP9.46□□□□□ -0.9
CASP4-210ENST00000531546 PDE2AO00408 941 aaPredicted RBP9.45□□□□□ -0.9
CASP4-210ENST00000531546 CES1P23141 567 aa9.45□□□□□ -0.9
CASP4-210ENST00000531546 C19orf57Q0VDD7 668 aa9.45□□□□□ -0.9
CASP4-210ENST00000531546 LEMD3Q9Y2U8 911 aa9.45□□□□□ -0.9
CASP4-210ENST00000531546 NCAPD3P42695 1498 aa9.45□□□□□ -0.9
CASP4-210ENST00000531546 PCSK2P16519 638 aa9.44□□□□□ -0.9
CASP4-210ENST00000531546 CLP1Q92989 425 aaKnown RBP9.44□□□□□ -0.9
CASP4-210ENST00000531546 DZANK1Q9NVP4 752 aa9.44□□□□□ -0.9
CASP4-210ENST00000531546 SOX13Q9UN79 622 aa9.44□□□□□ -0.9
CASP4-210ENST00000531546 NFKBIEO00221 500 aa9.43□□□□□ -0.9
CASP4-210ENST00000531546 ATG7O95352 703 aa9.43□□□□□ -0.9
CASP4-210ENST00000531546 RXRBP28702 533 aa9.43□□□□□ -0.9
CASP4-210ENST00000531546 HOXA10P31260 410 aaPredicted RBP9.43□□□□□ -0.9
CASP4-210ENST00000531546 SGO2Q562F6 1265 aa9.43□□□□□ -0.9
CASP4-210ENST00000531546 TMEM164Q5U3C3 297 aa9.43□□□□□ -0.9
CASP4-210ENST00000531546 NUTM2GQ5VZR2 741 aa9.43□□□□□ -0.9
CASP4-210ENST00000531546 XKR5Q6UX68 686 aa9.43□□□□□ -0.9
CASP4-210ENST00000531546 TTC16Q8NEE8 873 aa9.43□□□□□ -0.9
CASP4-210ENST00000531546 PMEPA1Q969W9 287 aa9.43□□□□□ -0.9
CASP4-210ENST00000531546 OSBPL1AQ9BXW6 950 aa9.43□□□□□ -0.9
CASP4-210ENST00000531546 CYP4F12Q9HCS2 524 aa9.43□□□□□ -0.9
CASP4-210ENST00000531546 CNTN3Q9P232 1028 aa9.43□□□□□ -0.9
CASP4-210ENST00000531546 FOSL1P15407 271 aa9.42□□□□□ -0.9
CASP4-210ENST00000531546 FZD5Q13467 585 aa9.42□□□□□ -0.9
CASP4-210ENST00000531546 ABI1Q8IZP0 508 aa9.42□□□□□ -0.9
CASP4-210ENST00000531546 TMEM102Q8N9M5 508 aaPredicted RBP9.42□□□□□ -0.9
CASP4-210ENST00000531546 METTL22Q9BUU2 404 aaPredicted RBP9.42□□□□□ -0.9
CASP4-210ENST00000531546 ACPPP15309 386 aa9.41□□□□□ -0.9
CASP4-210ENST00000531546 MSMPQ1L6U9 139 aa9.41□□□□□ -0.9
CASP4-210ENST00000531546 VSIG10LQ86VR7 867 aa9.41□□□□□ -0.9
CASP4-210ENST00000531546 C1orf127Q8N9H9 656 aa9.41□□□□□ -0.9
CASP4-210ENST00000531546 SMG8Q8ND04 991 aaKnown RBP9.41□□□□□ -0.9
CASP4-210ENST00000531546 SUGCTQ9HAC7 445 aa9.41□□□□□ -0.9
CASP4-210ENST00000531546 LAMC3Q9Y6N6 1575 aa9.41□□□□□ -0.9
CASP4-210ENST00000531546 FBXL6Q8N531 539 aa9.4□□□□□ -0.9
CASP4-210ENST00000531546 C12orf50Q8NA57 414 aaPredicted RBP9.4□□□□□ -0.9
CASP4-210ENST00000531546 BSNDQ8WZ55 320 aa9.4□□□□□ -0.9
CASP4-210ENST00000531546 FBXL18Q96ME1 805 aa9.4□□□□□ -0.9
CASP4-210ENST00000531546 TMPRSS13Q9BYE2 586 aa9.4□□□□□ -0.9
CASP4-210ENST00000531546 PDS5BQ9NTI5 1447 aa9.39□□□□□ -0.91
CASP4-210ENST00000531546 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.39□□□□□ -0.91
CASP4-210ENST00000531546 TIAF1O95411 115 aa9.39□□□□□ -0.91
CASP4-210ENST00000531546 PRNPP04156 253 aa9.39□□□□□ -0.91
CASP4-210ENST00000531546 F13BP05160 661 aa9.39□□□□□ -0.91
CASP4-210ENST00000531546 IKBKEQ14164 716 aa9.39□□□□□ -0.91
CASP4-210ENST00000531546 CYB5RLQ6IPT4 315 aa9.39□□□□□ -0.91
CASP4-210ENST00000531546 PAOXQ6QHF9 649 aa9.39□□□□□ -0.91
CASP4-210ENST00000531546 ATCAYQ86WG3 371 aa9.39□□□□□ -0.91
CASP4-210ENST00000531546 EDEM1Q92611 657 aa9.39□□□□□ -0.91
CASP4-210ENST00000531546 USP26Q9BXU7 913 aa9.39□□□□□ -0.91
CASP4-210ENST00000531546 CCDC39Q9UFE4 941 aa9.39□□□□□ -0.91
CASP4-210ENST00000531546 FAM95CA0A1B0GW59 222 aa9.38□□□□□ -0.91
CASP4-210ENST00000531546 YIPF2Q9BWQ6 316 aa9.38□□□□□ -0.91
CASP4-210ENST00000531546 SOX17Q9H6I2 414 aaPredicted RBP9.38□□□□□ -0.91
CASP4-210ENST00000531546 ATAD2BQ9ULI0 1458 aa9.38□□□□□ -0.91
CASP4-210ENST00000531546 ARHGEF11O15085 1522 aa9.37□□□□□ -0.91
CASP4-210ENST00000531546 EIF4EBP3O60516 100 aaPredicted RBP9.37□□□□□ -0.91
CASP4-210ENST00000531546 DNM1Q05193 864 aaKnown RBP9.37□□□□□ -0.91
CASP4-210ENST00000531546 HHIPQ96QV1 700 aa9.37□□□□□ -0.91
CASP4-210ENST00000531546 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.37□□□□□ -0.91
CASP4-210ENST00000531546 HMGXB3Q12766 1538 aa9.36□□□□□ -0.91
CASP4-210ENST00000531546 MRC2Q9UBG0 1479 aa9.36□□□□□ -0.91
CASP4-210ENST00000531546 LOC100289279A0A1B0GTE1 492 aa9.36□□□□□ -0.91
CASP4-210ENST00000531546 ATP2B4P23634 1241 aa9.36□□□□□ -0.91
CASP4-210ENST00000531546 USP11P51784 963 aa9.36□□□□□ -0.91
CASP4-210ENST00000531546 SRPK2P78362 688 aaKnown RBP9.36□□□□□ -0.91
CASP4-210ENST00000531546 NFKBIBQ15653 356 aa9.36□□□□□ -0.91
CASP4-210ENST00000531546 C8orf34Q49A92 452 aa9.36□□□□□ -0.91
CASP4-210ENST00000531546 HELQQ8TDG4 1101 aa9.36□□□□□ -0.91
CASP4-210ENST00000531546 ASIC4Q96FT7 647 aa9.36□□□□□ -0.91
CASP4-210ENST00000531546 OSMRQ99650 979 aa9.36□□□□□ -0.91
CASP4-210ENST00000531546 SOX1O00570 391 aaPredicted RBP9.35□□□□□ -0.91
CASP4-210ENST00000531546 TRPA1O75762 1119 aa9.35□□□□□ -0.91
CASP4-210ENST00000531546 PDGFAP04085 211 aa9.35□□□□□ -0.91
CASP4-210ENST00000531546 EDN3P14138 238 aa9.35□□□□□ -0.91
CASP4-210ENST00000531546 MZF1P28698 734 aaPredicted RBP9.35□□□□□ -0.91
CASP4-210ENST00000531546 HGSNATQ68CP4 663 aa9.35□□□□□ -0.91
CASP4-210ENST00000531546 TP53INP2Q8IXH6 220 aa9.35□□□□□ -0.91
CASP4-210ENST00000531546 NXPE3Q969Y0 559 aa9.35□□□□□ -0.91
CASP4-210ENST00000531546 CHRDQ9H2X0 955 aa9.35□□□□□ -0.91
CASP4-210ENST00000531546 SEPT3Q9UH03 358 aa9.35□□□□□ -0.91
CASP4-210ENST00000531546 NOM1Q5C9Z4 860 aaKnown RBP9.34□□□□□ -0.91
CASP4-210ENST00000531546 EXOSC6Q5RKV6 272 aaKnown RBP9.34□□□□□ -0.91
CASP4-210ENST00000531546 LCE1DQ5T752 114 aa9.34□□□□□ -0.91
CASP4-210ENST00000531546 CBLL1Q75N03 491 aa9.34□□□□□ -0.91
CASP4-210ENST00000531546 VN1R5Q7Z5H4 357 aa9.34□□□□□ -0.91
CASP4-210ENST00000531546 ZKSCAN3Q9BRR0 538 aa9.34□□□□□ -0.91
CASP4-210ENST00000531546 BSDC1Q9NW68 430 aaPredicted RBP9.34□□□□□ -0.91
CASP4-210ENST00000531546 CYP26A1O43174 497 aa9.33□□□□□ -0.92
CASP4-210ENST00000531546 OGFOD2Q6N063 350 aa9.33□□□□□ -0.92
CASP4-210ENST00000531546 AGBL5Q8NDL9 886 aa9.33□□□□□ -0.92
CASP4-210ENST00000531546 TBC1D32Q96NH3 1257 aa9.33□□□□□ -0.92
CASP4-210ENST00000531546 GGNBP2Q9H3C7 697 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms