RNA–Protein interactions for RNA: ENST00000530861.5

BDNF-215, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,918 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-215ENST00000530861 CCDC152Q4G0S7 254 aa14.69□□□□□ -0.06
BDNF-215ENST00000530861 TRIM22Q8IYM9 498 aa14.69□□□□□ -0.06
BDNF-215ENST00000530861 EEF2KMTQ96G04 330 aa14.69□□□□□ -0.06
BDNF-215ENST00000530861 TEX13AQ9BXU3 409 aaPredicted RBP14.69□□□□□ -0.06
BDNF-215ENST00000530861 MKNK2Q9HBH9 465 aa14.69□□□□□ -0.06
BDNF-215ENST00000530861 KIAA1210Q9ULL0 1709 aa14.69□□□□□ -0.06
BDNF-215ENST00000530861 DIP2AQ14689 1571 aa14.69□□□□□ -0.06
BDNF-215ENST00000530861 RGS12O14924 1447 aa14.69□□□□□ -0.06
BDNF-215ENST00000530861 ERVV-2B6SEH9 535 aa14.69□□□□□ -0.06
BDNF-215ENST00000530861 USPL1Q5W0Q7 1092 aa14.69□□□□□ -0.06
BDNF-215ENST00000530861 CCDC186Q7Z3E2 898 aa14.69□□□□□ -0.06
BDNF-215ENST00000530861 NLRP10Q86W26 655 aa14.69□□□□□ -0.06
BDNF-215ENST00000530861 MAST3O60307 1309 aa14.69□□□□□ -0.06
BDNF-215ENST00000530861 COBLO75128 1261 aa14.68□□□□□ -0.06
BDNF-215ENST00000530861 SERPINC1P01008 464 aa14.68□□□□□ -0.06
BDNF-215ENST00000530861 ERCC3P19447 782 aa14.68□□□□□ -0.06
BDNF-215ENST00000530861 AFMP43652 599 aa14.68□□□□□ -0.06
BDNF-215ENST00000530861 LMOD1P29536 600 aaPredicted RBP14.68□□□□□ -0.06
BDNF-215ENST00000530861 CTSWP56202 376 aa14.68□□□□□ -0.06
BDNF-215ENST00000530861 MSL1Q68DK7 614 aa14.68□□□□□ -0.06
BDNF-215ENST00000530861 INTS4Q96HW7 963 aaKnown RBP14.68□□□□□ -0.06
BDNF-215ENST00000530861 HAUS7Q99871 368 aa14.68□□□□□ -0.06
BDNF-215ENST00000530861 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.68□□□□□ -0.06
BDNF-215ENST00000530861 V9GYY5 206 aaPredicted RBP14.68□□□□□ -0.06
BDNF-215ENST00000530861 HEG1Q9ULI3 1381 aa14.68□□□□□ -0.06
BDNF-215ENST00000530861 UBE2Q2LH0YL09 131 aa14.68□□□□□ -0.06
BDNF-215ENST00000530861 ZBTB43O43298 467 aa14.68□□□□□ -0.06
BDNF-215ENST00000530861 PTF1AQ7RTS3 328 aa14.68□□□□□ -0.06
BDNF-215ENST00000530861 USP28Q96RU2 1077 aa14.68□□□□□ -0.06
BDNF-215ENST00000530861 SHPRHQ149N8 1683 aa14.68□□□□□ -0.06
BDNF-215ENST00000530861 ZSCAN25Q6NSZ9 544 aa14.67□□□□□ -0.06
BDNF-215ENST00000530861 TTLL11Q8NHH1 800 aa14.67□□□□□ -0.06
BDNF-215ENST00000530861 NLRP3Q96P20 1036 aa14.67□□□□□ -0.06
BDNF-215ENST00000530861 CCDC87Q9NVE4 849 aa14.67□□□□□ -0.06
BDNF-215ENST00000530861 TSPY2A6NKD2 308 aa14.67□□□□□ -0.06
BDNF-215ENST00000530861 GIGYF2Q6Y7W6 1299 aaKnown RBP14.67□□□□□ -0.06
BDNF-215ENST00000530861 STOX1Q6ZVD7 989 aa14.67□□□□□ -0.06
BDNF-215ENST00000530861 AK7Q96M32 723 aa14.67□□□□□ -0.06
BDNF-215ENST00000530861 UQCRHLA0A096LP55 91 aa14.67□□□□□ -0.06
BDNF-215ENST00000530861 MPHOSPH10O00566 681 aaKnown RBP14.67□□□□□ -0.06
BDNF-215ENST00000530861 UQCRHP07919 91 aa14.67□□□□□ -0.06
BDNF-215ENST00000530861 ZBTB38Q8NAP3 1195 aaPredicted RBP14.67□□□□□ -0.06
BDNF-215ENST00000530861 HMG20BQ9P0W2 317 aa14.67□□□□□ -0.06
BDNF-215ENST00000530861 ZNF652Q9Y2D9 606 aa14.67□□□□□ -0.06
BDNF-215ENST00000530861 PTGS1P23219 599 aa14.66□□□□□ -0.06
BDNF-215ENST00000530861 MCAMP43121 646 aa14.66□□□□□ -0.06
BDNF-215ENST00000530861 FOXO4P98177 505 aa14.66□□□□□ -0.06
BDNF-215ENST00000530861 TYRO3Q06418 890 aa14.66□□□□□ -0.06
BDNF-215ENST00000530861 CCNL1Q9UK58 526 aaPredicted RBP14.66□□□□□ -0.06
BDNF-215ENST00000530861 SPATA31D1Q6ZQQ2 1576 aa14.66□□□□□ -0.06
BDNF-215ENST00000530861 KIF24Q5T7B8 1368 aa14.66□□□□□ -0.06
BDNF-215ENST00000530861 PDE8AO60658 829 aa14.66□□□□□ -0.06
BDNF-215ENST00000530861 DYNLL1P63167 89 aaKnown RBP14.66□□□□□ -0.06
BDNF-215ENST00000530861 NAA16Q6N069 864 aaPredicted RBP14.66□□□□□ -0.06
BDNF-215ENST00000530861 LEO1Q8WVC0 666 aaPredicted RBP14.66□□□□□ -0.06
BDNF-215ENST00000530861 PIH1D3Q9NQM4 214 aaKnown RBP14.66□□□□□ -0.06
BDNF-215ENST00000530861 NRKQ7Z2Y5 1582 aa14.66□□□□□ -0.06
BDNF-215ENST00000530861 H7C1W4 665 aa14.65□□□□□ -0.06
BDNF-215ENST00000530861 PCMTD1Q96MG8 357 aaPredicted RBP14.65□□□□□ -0.06
BDNF-215ENST00000530861 MCM9Q9NXL9 1143 aa14.65□□□□□ -0.06
BDNF-215ENST00000530861 STX17P56962 302 aa14.65□□□□□ -0.06
BDNF-215ENST00000530861 ATG9AQ7Z3C6 839 aa14.65□□□□□ -0.06
BDNF-215ENST00000530861 TOB2Q14106 344 aaPredicted RBP14.65□□□□□ -0.06
BDNF-215ENST00000530861 WTAPQ15007 396 aa14.65□□□□□ -0.06
BDNF-215ENST00000530861 ERFEQ4G0M1 354 aa14.65□□□□□ -0.06
BDNF-215ENST00000530861 SPATA5Q8NB90 893 aa14.65□□□□□ -0.06
BDNF-215ENST00000530861 CDC5LQ99459 802 aaKnown RBP14.65□□□□□ -0.06
BDNF-215ENST00000530861 MAPK8IP1Q9UQF2 711 aa14.65□□□□□ -0.06
BDNF-215ENST00000530861 TOM1O60784 492 aa14.64□□□□□ -0.07
BDNF-215ENST00000530861 SSBP05455 408 aaKnown RBP eCLIP14.64□□□□□ -0.07
BDNF-215ENST00000530861 PDE6AP16499 860 aa14.64□□□□□ -0.07
BDNF-215ENST00000530861 AOPEPQ8N6M6 819 aa14.64□□□□□ -0.07
BDNF-215ENST00000530861 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.64□□□□□ -0.07
BDNF-215ENST00000530861 MAP3K15Q6ZN16 1313 aa14.64□□□□□ -0.07
BDNF-215ENST00000530861 LRMPQ12912 555 aa14.64□□□□□ -0.07
BDNF-215ENST00000530861 CFAP100Q494V2 611 aa14.64□□□□□ -0.07
BDNF-215ENST00000530861 APPBP2Q92624 585 aa14.64□□□□□ -0.07
BDNF-215ENST00000530861 BAZ2BQ9UIF8 2168 aaKnown RBP14.64□□□□□ -0.07
BDNF-215ENST00000530861 NRDCO43847 1150 aa14.64□□□□□ -0.07
BDNF-215ENST00000530861 PDE8BO95263 885 aa14.64□□□□□ -0.07
BDNF-215ENST00000530861 TPM4P67936 248 aa14.64□□□□□ -0.07
BDNF-215ENST00000530861 CLIC6Q96NY7 704 aa14.64□□□□□ -0.07
BDNF-215ENST00000530861 ZHX3Q9H4I2 956 aa14.64□□□□□ -0.07
BDNF-215ENST00000530861 CLIP2Q9UDT6 1046 aa14.64□□□□□ -0.07
BDNF-215ENST00000530861 AGLP35573 1532 aa14.64□□□□□ -0.07
BDNF-215ENST00000530861 SMIM22K7EJ46 135 aa14.63□□□□□ -0.07
BDNF-215ENST00000530861 NOC3LQ8WTT2 800 aaKnown RBP14.63□□□□□ -0.07
BDNF-215ENST00000530861 SENP2Q9HC62 589 aa14.63□□□□□ -0.07
BDNF-215ENST00000530861 CEMIPQ8WUJ3 1361 aa14.63□□□□□ -0.07
BDNF-215ENST00000530861 TECPR2O15040 1411 aa14.63□□□□□ -0.07
BDNF-215ENST00000530861 RPGRQ92834 1020 aaKnown RBP14.63□□□□□ -0.07
BDNF-215ENST00000530861 NRBP1Q9UHY1 535 aa14.63□□□□□ -0.07
BDNF-215ENST00000530861 HMGB1P09429 215 aaKnown RBP14.63□□□□□ -0.07
BDNF-215ENST00000530861 CHRNDQ07001 517 aa14.63□□□□□ -0.07
BDNF-215ENST00000530861 SSRP1Q08945 709 aaKnown RBP14.63□□□□□ -0.07
BDNF-215ENST00000530861 CUL4AQ13619 759 aa14.63□□□□□ -0.07
BDNF-215ENST00000530861 FSD2A1L4K1 749 aa14.62□□□□□ -0.07
BDNF-215ENST00000530861 AMOTL1Q8IY63 956 aa14.62□□□□□ -0.07
BDNF-215ENST00000530861 DNAJC5Q9H3Z4 198 aa14.62□□□□□ -0.07
BDNF-215ENST00000530861 RTCBQ9Y3I0 505 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms