RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 TTLL5Q6EMB2 1281 aa19.69■□□□□ 0.74
BRK1-201ENST00000530758 PSMD14O00487 310 aa19.68■□□□□ 0.74
BRK1-201ENST00000530758 SMARCA5O60264 1052 aaPredicted RBP19.68■□□□□ 0.74
BRK1-201ENST00000530758 RAD17O75943 681 aa19.68■□□□□ 0.74
BRK1-201ENST00000530758 UQCRFS1P1P0C7P4 283 aa19.68■□□□□ 0.74
BRK1-201ENST00000530758 CCDC158Q5M9N0 1113 aa19.68■□□□□ 0.74
BRK1-201ENST00000530758 ANKRD45Q5TZF3 282 aa19.68■□□□□ 0.74
BRK1-201ENST00000530758 RBM46Q8TBY0 533 aaKnown RBP19.68■□□□□ 0.74
BRK1-201ENST00000530758 DPF2Q92785 391 aa19.68■□□□□ 0.74
BRK1-201ENST00000530758 L3MBTL3Q96JM7 780 aaPredicted RBP19.68■□□□□ 0.74
BRK1-201ENST00000530758 TLR7Q9NYK1 1049 aaKnown RBP19.68■□□□□ 0.74
BRK1-201ENST00000530758 DENND2AQ9ULE3 1009 aa19.68■□□□□ 0.74
BRK1-201ENST00000530758 SCN4AP35499 1836 aa19.67■□□□□ 0.74
BRK1-201ENST00000530758 DDNO94850 711 aaPredicted RBP19.67■□□□□ 0.74
BRK1-201ENST00000530758 IFIT2P09913 472 aaKnown RBP19.67■□□□□ 0.74
BRK1-201ENST00000530758 RPS12P25398 132 aaKnown RBP19.67■□□□□ 0.74
BRK1-201ENST00000530758 GTF2IP78347 998 aa19.67■□□□□ 0.74
BRK1-201ENST00000530758 NUCB1Q02818 461 aa19.67■□□□□ 0.74
BRK1-201ENST00000530758 GORABQ5T7V8 394 aa19.67■□□□□ 0.74
BRK1-201ENST00000530758 RSBN1LQ6PCB5 846 aaPredicted RBP19.67■□□□□ 0.74
BRK1-201ENST00000530758 AGBL3Q8NEM8 1001 aa19.67■□□□□ 0.74
BRK1-201ENST00000530758 GMLQ99445 158 aa19.67■□□□□ 0.74
BRK1-201ENST00000530758 MMP14P50281 582 aa19.66■□□□□ 0.74
BRK1-201ENST00000530758 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.66■□□□□ 0.74
BRK1-201ENST00000530758 MYO3BQ8WXR4 1341 aa19.66■□□□□ 0.74
BRK1-201ENST00000530758 TBC1D22AQ8WUA7 517 aa19.65■□□□□ 0.74
BRK1-201ENST00000530758 SALL3Q9BXA9 1300 aa19.65■□□□□ 0.74
BRK1-201ENST00000530758 SALL1Q9NSC2 1324 aa19.65■□□□□ 0.74
BRK1-201ENST00000530758 VEGFAP15692 232 aaPredicted RBP19.64■□□□□ 0.73
BRK1-201ENST00000530758 RASGRF1Q13972 1273 aa19.64■□□□□ 0.73
BRK1-201ENST00000530758 CHD1LQ86WJ1 897 aa19.64■□□□□ 0.73
BRK1-201ENST00000530758 C16orf71Q8IYS4 520 aaPredicted RBP19.64■□□□□ 0.73
BRK1-201ENST00000530758 WDR66Q8TBY9 1149 aa19.64■□□□□ 0.73
BRK1-201ENST00000530758 PPP4R2Q9NY27 417 aa19.64■□□□□ 0.73
BRK1-201ENST00000530758 HMG20BQ9P0W2 317 aa19.64■□□□□ 0.73
BRK1-201ENST00000530758 IQSEC3Q9UPP2 1182 aaPredicted RBP19.64■□□□□ 0.73
BRK1-201ENST00000530758 SUGT1Q9Y2Z0 365 aa19.64■□□□□ 0.73
BRK1-201ENST00000530758 COL1A1P02452 1464 aaPredicted RBP19.64■□□□□ 0.73
BRK1-201ENST00000530758 FRAT2O75474 233 aaPredicted RBP19.63■□□□□ 0.73
BRK1-201ENST00000530758 ATP5JP18859 108 aa19.63■□□□□ 0.73
BRK1-201ENST00000530758 MCAMP43121 646 aa19.63■□□□□ 0.73
BRK1-201ENST00000530758 SCNN1DP51172 638 aa19.63■□□□□ 0.73
BRK1-201ENST00000530758 TTC39AQ5SRH9 613 aa19.63■□□□□ 0.73
BRK1-201ENST00000530758 CENPQQ7L2Z9 268 aaPredicted RBP19.63■□□□□ 0.73
BRK1-201ENST00000530758 CERS5Q8N5B7 392 aa19.63■□□□□ 0.73
BRK1-201ENST00000530758 GJA3Q9Y6H8 435 aa19.63■□□□□ 0.73
BRK1-201ENST00000530758 TTC41PQ6P2S7 1318 aa19.62■□□□□ 0.73
BRK1-201ENST00000530758 IGSF3O75054 1194 aa19.62■□□□□ 0.73
BRK1-201ENST00000530758 SCARF1Q14162 830 aa19.62■□□□□ 0.73
BRK1-201ENST00000530758 B4GALNT3Q6L9W6 998 aa19.62■□□□□ 0.73
BRK1-201ENST00000530758 SPATA5Q8NB90 893 aa19.62■□□□□ 0.73
BRK1-201ENST00000530758 GPRC5DQ9NZD1 345 aa19.62■□□□□ 0.73
BRK1-201ENST00000530758 ZBTB47Q9UFB7 747 aaPredicted RBP19.62■□□□□ 0.73
BRK1-201ENST00000530758 ZBTB12Q9Y330 459 aaPredicted RBP19.62■□□□□ 0.73
BRK1-201ENST00000530758 GMPSP49915 693 aaPredicted RBP19.61■□□□□ 0.73
BRK1-201ENST00000530758 MFSD14BQ5SR56 506 aa19.61■□□□□ 0.73
BRK1-201ENST00000530758 CCDC136Q96JN2 1154 aa19.61■□□□□ 0.73
BRK1-201ENST00000530758 MRIQ9BWK5 157 aa19.61■□□□□ 0.73
BRK1-201ENST00000530758 ECHDC1Q9NTX5 307 aa19.61■□□□□ 0.73
BRK1-201ENST00000530758 STAP2Q9UGK3 403 aa19.61■□□□□ 0.73
BRK1-201ENST00000530758 ZNF280AP59817 542 aaPredicted RBP19.6■□□□□ 0.73
BRK1-201ENST00000530758 FSTL1Q12841 308 aa19.6■□□□□ 0.73
BRK1-201ENST00000530758 MXD3Q9BW11 206 aa19.6■□□□□ 0.73
BRK1-201ENST00000530758 LNPKQ9C0E8 428 aa19.6■□□□□ 0.73
BRK1-201ENST00000530758 CNOT7Q9UIV1 285 aaKnown RBP19.6■□□□□ 0.73
BRK1-201ENST00000530758 IQCA1LA6NCM1 817 aa19.59■□□□□ 0.73
BRK1-201ENST00000530758 POTEIP0CG38 1075 aa19.59■□□□□ 0.73
BRK1-201ENST00000530758 POTEJP0CG39 1038 aa19.59■□□□□ 0.73
BRK1-201ENST00000530758 CHAF1AQ13111 956 aaPredicted RBP19.59■□□□□ 0.73
BRK1-201ENST00000530758 ZGPATQ8N5A5 531 aaKnown RBP19.59■□□□□ 0.73
BRK1-201ENST00000530758 OSBPL3Q9H4L5 887 aa19.59■□□□□ 0.73
BRK1-201ENST00000530758 ADAMTSL1Q8N6G6 1762 aa19.58■□□□□ 0.73
BRK1-201ENST00000530758 USP17L8P0C7I0 530 aa19.58■□□□□ 0.72
BRK1-201ENST00000530758 MX1P20591 662 aa19.58■□□□□ 0.72
BRK1-201ENST00000530758 PI16Q6UXB8 463 aa19.58■□□□□ 0.72
BRK1-201ENST00000530758 OTUD7AQ8TE49 926 aaPredicted RBP19.58■□□□□ 0.72
BRK1-201ENST00000530758 FBXW7Q969H0 707 aa19.58■□□□□ 0.72
BRK1-201ENST00000530758 GPATCH3Q96I76 525 aa19.58■□□□□ 0.72
BRK1-201ENST00000530758 HACL1Q9UJ83 578 aa19.58■□□□□ 0.72
BRK1-201ENST00000530758 JAG2Q9Y219 1238 aa19.58■□□□□ 0.72
BRK1-201ENST00000530758 MYO5AQ9Y4I1 1855 aaKnown RBP19.58■□□□□ 0.72
BRK1-201ENST00000530758 CYP2E1P05181 493 aaPredicted RBP19.57■□□□□ 0.72
BRK1-201ENST00000530758 EPS15P42566 896 aa19.57■□□□□ 0.72
BRK1-201ENST00000530758 ZAP70P43403 619 aa19.57■□□□□ 0.72
BRK1-201ENST00000530758 HDLBPQ00341 1268 aaKnown RBP19.57■□□□□ 0.72
BRK1-201ENST00000530758 SMC1BQ8NDV3 1235 aa19.57■□□□□ 0.72
BRK1-201ENST00000530758 PI4K2BQ8TCG2 481 aa19.57■□□□□ 0.72
BRK1-201ENST00000530758 HAUS7Q99871 368 aa19.57■□□□□ 0.72
BRK1-201ENST00000530758 DOCK2Q92608 1830 aa19.57■□□□□ 0.72
BRK1-201ENST00000530758 H7C1D1 291 aa19.56■□□□□ 0.72
BRK1-201ENST00000530758 LMOD1P29536 600 aaPredicted RBP19.56■□□□□ 0.72
BRK1-201ENST00000530758 PDE1AP54750 535 aa19.56■□□□□ 0.72
BRK1-201ENST00000530758 HTRA3P83110 453 aa19.56■□□□□ 0.72
BRK1-201ENST00000530758 GRIK5Q16478 980 aa19.56■□□□□ 0.72
BRK1-201ENST00000530758 SPTY2D1Q68D10 685 aaPredicted RBP19.56■□□□□ 0.72
BRK1-201ENST00000530758 PLEKHM2Q8IWE5 1019 aa19.56■□□□□ 0.72
BRK1-201ENST00000530758 MTMR14Q8NCE2 650 aa19.56■□□□□ 0.72
BRK1-201ENST00000530758 TAF1DQ9H5J8 278 aaPredicted RBP19.56■□□□□ 0.72
BRK1-201ENST00000530758 AOX1Q06278 1338 aa19.55■□□□□ 0.72
BRK1-201ENST00000530758 ERC2O15083 957 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms