RNA–Protein interactions for RNA: ENST00000530402.1

VPS26B-205, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-205ENST00000530402 FBXO24O75426 580 aa9.74□□□□□ -0.85
VPS26B-205ENST00000530402 TCF3P15923 654 aa9.74□□□□□ -0.85
VPS26B-205ENST00000530402 GRIK5Q16478 980 aa9.74□□□□□ -0.85
VPS26B-205ENST00000530402 FAM117BQ6P1L5 589 aa9.74□□□□□ -0.85
VPS26B-205ENST00000530402 ADAMTSL4Q6UY14 1074 aa9.74□□□□□ -0.85
VPS26B-205ENST00000530402 TPTE2Q6XPS3 522 aa9.74□□□□□ -0.85
VPS26B-205ENST00000530402 ZNF576Q9H609 170 aa9.74□□□□□ -0.85
VPS26B-205ENST00000530402 GPN3Q9UHW5 284 aaPredicted RBP9.74□□□□□ -0.85
VPS26B-205ENST00000530402 PPM1HQ9ULR3 514 aa9.74□□□□□ -0.85
VPS26B-205ENST00000530402 SOX13Q9UN79 622 aa9.74□□□□□ -0.85
VPS26B-205ENST00000530402 EPHA1P21709 976 aa9.73□□□□□ -0.85
VPS26B-205ENST00000530402 PCDH1Q08174 1060 aa9.73□□□□□ -0.85
VPS26B-205ENST00000530402 IKBKEQ14164 716 aa9.73□□□□□ -0.85
VPS26B-205ENST00000530402 LINC01387J3KSC0 135 aa9.72□□□□□ -0.85
VPS26B-205ENST00000530402 WIPF1O43516 503 aa9.72□□□□□ -0.85
VPS26B-205ENST00000530402 ZNF76P36508 570 aa9.72□□□□□ -0.85
VPS26B-205ENST00000530402 ZNF157P51786 506 aaPredicted RBP9.72□□□□□ -0.85
VPS26B-205ENST00000530402 CCDC85BQ15834 202 aaPredicted RBP9.72□□□□□ -0.85
VPS26B-205ENST00000530402 RPS26P11Q5JNZ5 115 aaPredicted RBP9.72□□□□□ -0.85
VPS26B-205ENST00000530402 MSL1Q68DK7 614 aa9.72□□□□□ -0.85
VPS26B-205ENST00000530402 TXNDC11Q6PKC3 985 aa9.72□□□□□ -0.85
VPS26B-205ENST00000530402 VN1R5Q7Z5H4 357 aa9.72□□□□□ -0.85
VPS26B-205ENST00000530402 SLC7A3Q8WY07 619 aa9.72□□□□□ -0.85
VPS26B-205ENST00000530402 CEP44Q9C0F1 390 aa9.72□□□□□ -0.85
VPS26B-205ENST00000530402 PRDM6Q9NQX0 595 aa9.72□□□□□ -0.85
VPS26B-205ENST00000530402 USP31Q70CQ4 1352 aa9.72□□□□□ -0.85
VPS26B-205ENST00000530402 H3BRJ5 948 aa9.71□□□□□ -0.86
VPS26B-205ENST00000530402 ST13P50502 369 aaKnown RBP9.71□□□□□ -0.86
VPS26B-205ENST00000530402 TRAPPC3LQ5T215 181 aa9.71□□□□□ -0.86
VPS26B-205ENST00000530402 LDLRAD1Q5T700 205 aa9.71□□□□□ -0.86
VPS26B-205ENST00000530402 DMRTC2Q8IXT2 367 aaPredicted RBP9.71□□□□□ -0.86
VPS26B-205ENST00000530402 RNF34Q969K3 372 aa9.71□□□□□ -0.86
VPS26B-205ENST00000530402 DGKGP49619 791 aa9.7□□□□□ -0.86
VPS26B-205ENST00000530402 ARL4DP49703 201 aa9.7□□□□□ -0.86
VPS26B-205ENST00000530402 PPP2R3AQ06190 1150 aa9.7□□□□□ -0.86
VPS26B-205ENST00000530402 C9orf131Q5VYM1 1079 aa9.7□□□□□ -0.86
VPS26B-205ENST00000530402 ZSCAN1Q8NBB4 408 aa9.7□□□□□ -0.86
VPS26B-205ENST00000530402 DDX54Q8TDD1 881 aaKnown RBP9.7□□□□□ -0.86
VPS26B-205ENST00000530402 SEC31BQ9NQW1 1179 aa9.7□□□□□ -0.86
VPS26B-205ENST00000530402 METTL5Q9NRN9 209 aaKnown RBP9.7□□□□□ -0.86
VPS26B-205ENST00000530402 ESRRAP11474 423 aaPredicted RBP9.69□□□□□ -0.86
VPS26B-205ENST00000530402 BAG6P46379 1132 aa9.69□□□□□ -0.86
VPS26B-205ENST00000530402 HS2ST1Q7LGA3 356 aa9.69□□□□□ -0.86
VPS26B-205ENST00000530402 TMEM39AQ9NV64 488 aa9.69□□□□□ -0.86
VPS26B-205ENST00000530402 ARHGEF15O94989 841 aa9.68□□□□□ -0.86
VPS26B-205ENST00000530402 NID1P14543 1247 aa9.68□□□□□ -0.86
VPS26B-205ENST00000530402 FANCCQ00597 558 aa9.68□□□□□ -0.86
VPS26B-205ENST00000530402 FAAP100Q0VG06 881 aa9.68□□□□□ -0.86
VPS26B-205ENST00000530402 ZNF423Q2M1K9 1284 aa9.68□□□□□ -0.86
VPS26B-205ENST00000530402 SV2BQ7L1I2 683 aa9.68□□□□□ -0.86
VPS26B-205ENST00000530402 GGT7Q9UJ14 662 aa9.68□□□□□ -0.86
VPS26B-205ENST00000530402 PIK3R2O00459 728 aa9.67□□□□□ -0.86
VPS26B-205ENST00000530402 SOX1O00570 391 aaPredicted RBP9.67□□□□□ -0.86
VPS26B-205ENST00000530402 SNRPNP63162 240 aaKnown RBP9.67□□□□□ -0.86
VPS26B-205ENST00000530402 PIP4K2BP78356 416 aa9.67□□□□□ -0.86
VPS26B-205ENST00000530402 HDLBPQ00341 1268 aaKnown RBP9.67□□□□□ -0.86
VPS26B-205ENST00000530402 GSTM4Q03013 218 aa9.67□□□□□ -0.86
VPS26B-205ENST00000530402 MAP3K11Q16584 847 aa9.67□□□□□ -0.86
VPS26B-205ENST00000530402 PODNQ7Z5L7 613 aa9.67□□□□□ -0.86
VPS26B-205ENST00000530402 CARD10Q9BWT7 1032 aa9.67□□□□□ -0.86
VPS26B-205ENST00000530402 MKL2Q9ULH7 1088 aa9.67□□□□□ -0.86
VPS26B-205ENST00000530402 FSCN2O14926 492 aa9.66□□□□□ -0.86
VPS26B-205ENST00000530402 B3GALT4O96024 378 aa9.66□□□□□ -0.86
VPS26B-205ENST00000530402 INSM1Q01101 510 aaPredicted RBP9.66□□□□□ -0.86
VPS26B-205ENST00000530402 C19orf57Q0VDD7 668 aa9.66□□□□□ -0.86
VPS26B-205ENST00000530402 NECAB3Q96P71 396 aaPredicted RBP9.66□□□□□ -0.86
VPS26B-205ENST00000530402 NOC4LQ9BVI4 516 aaKnown RBP9.66□□□□□ -0.86
VPS26B-205ENST00000530402 CELA3AP09093 270 aa9.65□□□□□ -0.86
VPS26B-205ENST00000530402 HOXB4P17483 251 aaPredicted RBP9.65□□□□□ -0.86
VPS26B-205ENST00000530402 ANKRD24Q8TF21 1146 aa9.65□□□□□ -0.86
VPS26B-205ENST00000530402 WNT8BQ93098 351 aa9.65□□□□□ -0.86
VPS26B-205ENST00000530402 SAMM50Q9Y512 469 aa9.65□□□□□ -0.86
VPS26B-205ENST00000530402 SPDYE3A6NKU9 549 aa9.64□□□□□ -0.87
VPS26B-205ENST00000530402 ENC1O14682 589 aa9.64□□□□□ -0.87
VPS26B-205ENST00000530402 GNB5O14775 395 aa9.64□□□□□ -0.87
VPS26B-205ENST00000530402 RLBP1P12271 317 aa9.64□□□□□ -0.87
VPS26B-205ENST00000530402 LMNB1P20700 586 aa9.64□□□□□ -0.87
VPS26B-205ENST00000530402 ERCC5P28715 1186 aaPredicted RBP9.64□□□□□ -0.87
VPS26B-205ENST00000530402 RAC1P63000 192 aa9.64□□□□□ -0.87
VPS26B-205ENST00000530402 COL9A3Q14050 684 aaPredicted RBP9.64□□□□□ -0.87
VPS26B-205ENST00000530402 HGSNATQ68CP4 663 aa9.64□□□□□ -0.87
VPS26B-205ENST00000530402 NT5DC4Q86YG4 428 aa9.64□□□□□ -0.87
VPS26B-205ENST00000530402 RELL1Q8IUW5 271 aa9.64□□□□□ -0.87
VPS26B-205ENST00000530402 MAP4K3Q8IVH8 894 aa9.64□□□□□ -0.87
VPS26B-205ENST00000530402 TRIM56Q9BRZ2 755 aaKnown RBP9.64□□□□□ -0.87
VPS26B-205ENST00000530402 PLVAPQ9BX97 442 aa9.64□□□□□ -0.87
VPS26B-205ENST00000530402 OSGEPQ9NPF4 335 aa9.64□□□□□ -0.87
VPS26B-205ENST00000530402 F6X3S4 739 aa9.63□□□□□ -0.87
VPS26B-205ENST00000530402 EIF4EBP3O60516 100 aaPredicted RBP9.63□□□□□ -0.87
VPS26B-205ENST00000530402 CBX8Q9HC52 389 aa9.63□□□□□ -0.87
VPS26B-205ENST00000530402 SRA1Q9HD15 236 aaKnown RBP9.63□□□□□ -0.87
VPS26B-205ENST00000530402 IGSF5Q9NSI5 407 aa9.63□□□□□ -0.87
VPS26B-205ENST00000530402 PAGE1O75459 146 aa9.62□□□□□ -0.87
VPS26B-205ENST00000530402 GBP2P32456 591 aaPredicted RBP9.62□□□□□ -0.87
VPS26B-205ENST00000530402 PWP1Q13610 501 aa9.62□□□□□ -0.87
VPS26B-205ENST00000530402 SETDB1Q15047 1291 aa9.62□□□□□ -0.87
VPS26B-205ENST00000530402 TTBK2Q6IQ55 1244 aa9.62□□□□□ -0.87
VPS26B-205ENST00000530402 LINC00114Q6XXX2 140 aa9.62□□□□□ -0.87
VPS26B-205ENST00000530402 USP48Q86UV5 1035 aa9.62□□□□□ -0.87
VPS26B-205ENST00000530402 DTWD1Q8N5C7 304 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms