RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 RGS12O14924 1447 aa14.26□□□□□ -0.13
SCN3B-206ENST00000530277 RIOK3O14730 519 aaKnown RBP14.26□□□□□ -0.13
SCN3B-206ENST00000530277 CTAGE5O15320 804 aa14.26□□□□□ -0.13
SCN3B-206ENST00000530277 FGAP02671 866 aa14.26□□□□□ -0.13
SCN3B-206ENST00000530277 SNW1Q13573 536 aaKnown RBP14.26□□□□□ -0.13
SCN3B-206ENST00000530277 RTN1Q16799 776 aa14.26□□□□□ -0.13
SCN3B-206ENST00000530277 INCENPQ9NQS7 918 aa14.26□□□□□ -0.13
SCN3B-206ENST00000530277 BABAM1Q9NWV8 329 aa14.26□□□□□ -0.13
SCN3B-206ENST00000530277 PLEKHG1Q9ULL1 1385 aa14.26□□□□□ -0.13
SCN3B-206ENST00000530277 POLA2Q14181 598 aa14.25□□□□□ -0.13
SCN3B-206ENST00000530277 CCDC47Q96A33 483 aaKnown RBP14.25□□□□□ -0.13
SCN3B-206ENST00000530277 CDK5RAP3Q96JB5 506 aa14.25□□□□□ -0.13
SCN3B-206ENST00000530277 ZPR1O75312 459 aa14.25□□□□□ -0.13
SCN3B-206ENST00000530277 FAM193AP78312 1265 aa14.25□□□□□ -0.13
SCN3B-206ENST00000530277 FAM182BQ5T319 152 aa14.25□□□□□ -0.13
SCN3B-206ENST00000530277 PLCD3Q8N3E9 789 aa14.25□□□□□ -0.13
SCN3B-206ENST00000530277 KIDINS220Q9ULH0 1771 aa14.25□□□□□ -0.13
SCN3B-206ENST00000530277 ARHGAP31Q2M1Z3 1444 aa14.25□□□□□ -0.13
SCN3B-206ENST00000530277 IQGAP1P46940 1657 aa14.25□□□□□ -0.13
SCN3B-206ENST00000530277 DYNC1I1O14576 645 aa14.25□□□□□ -0.13
SCN3B-206ENST00000530277 GREM2Q9H772 168 aa14.25□□□□□ -0.13
SCN3B-206ENST00000530277 ADGRB1O14514 1584 aa14.25□□□□□ -0.13
SCN3B-206ENST00000530277 GNG11P61952 73 aa14.24□□□□□ -0.13
SCN3B-206ENST00000530277 ARHGAP29Q52LW3 1261 aa14.24□□□□□ -0.13
SCN3B-206ENST00000530277 BBXQ8WY36 941 aaPredicted RBP14.24□□□□□ -0.13
SCN3B-206ENST00000530277 EEF2KMTQ96G04 330 aa14.24□□□□□ -0.13
SCN3B-206ENST00000530277 CAMSAP1Q5T5Y3 1602 aa14.24□□□□□ -0.13
SCN3B-206ENST00000530277 ZNF532Q9HCE3 1301 aa14.24□□□□□ -0.13
SCN3B-206ENST00000530277 MYO3AQ8NEV4 1616 aa14.24□□□□□ -0.13
SCN3B-206ENST00000530277 ZNF827Q17R98 1081 aa14.24□□□□□ -0.13
SCN3B-206ENST00000530277 CABP5Q9NP86 173 aa14.24□□□□□ -0.13
SCN3B-206ENST00000530277 TFCP2L1Q9NZI6 479 aa14.24□□□□□ -0.13
SCN3B-206ENST00000530277 MPHOSPH10O00566 681 aaKnown RBP14.24□□□□□ -0.13
SCN3B-206ENST00000530277 KARSQ15046 597 aaKnown RBP14.24□□□□□ -0.13
SCN3B-206ENST00000530277 CATIPQ7Z7H3 387 aa14.24□□□□□ -0.13
SCN3B-206ENST00000530277 TRMT44Q8IYL2 757 aaKnown RBP14.24□□□□□ -0.13
SCN3B-206ENST00000530277 CGNQ9P2M7 1197 aaKnown RBP14.24□□□□□ -0.13
SCN3B-206ENST00000530277 ZFYP08048 801 aaPredicted RBP14.24□□□□□ -0.13
SCN3B-206ENST00000530277 NECTIN1Q15223 517 aa14.24□□□□□ -0.13
SCN3B-206ENST00000530277 SYT10Q6XYQ8 523 aa14.24□□□□□ -0.13
SCN3B-206ENST00000530277 CCDC191Q8NCU4 936 aa14.24□□□□□ -0.13
SCN3B-206ENST00000530277 KCNG4Q8TDN1 519 aa14.24□□□□□ -0.13
SCN3B-206ENST00000530277 VGLL3A8MV65 326 aa14.23□□□□□ -0.13
SCN3B-206ENST00000530277 COBLO75128 1261 aa14.23□□□□□ -0.13
SCN3B-206ENST00000530277 CPSF1Q10570 1443 aaKnown RBP14.23□□□□□ -0.13
SCN3B-206ENST00000530277 TTF1Q15361 905 aaPredicted RBP14.23□□□□□ -0.13
SCN3B-206ENST00000530277 DDB1Q16531 1140 aa14.23□□□□□ -0.13
SCN3B-206ENST00000530277 NEXMIFQ5QGS0 1516 aa14.23□□□□□ -0.13
SCN3B-206ENST00000530277 SMARCE1Q969G3 411 aa14.23□□□□□ -0.13
SCN3B-206ENST00000530277 ATP10DQ9P241 1426 aa14.23□□□□□ -0.13
SCN3B-206ENST00000530277 C6orf229H3BNL8 230 aa14.23□□□□□ -0.13
SCN3B-206ENST00000530277 EIF5P55010 431 aaKnown RBP14.23□□□□□ -0.13
SCN3B-206ENST00000530277 SDR42E1Q8WUS8 393 aa14.23□□□□□ -0.13
SCN3B-206ENST00000530277 CLIC6Q96NY7 704 aa14.23□□□□□ -0.13
SCN3B-206ENST00000530277 CLSTN2Q9H4D0 955 aa14.23□□□□□ -0.13
SCN3B-206ENST00000530277 MAGEC2Q9UBF1 373 aaPredicted RBP14.23□□□□□ -0.13
SCN3B-206ENST00000530277 PCDH11XQ9BZA7 1347 aa14.23□□□□□ -0.13
SCN3B-206ENST00000530277 PCDH11YQ9BZA8 1340 aa14.23□□□□□ -0.13
SCN3B-206ENST00000530277 U2AF2P26368 475 aaKnown RBP eCLIP14.23□□□□□ -0.13
SCN3B-206ENST00000530277 PHKA1P46020 1223 aa14.23□□□□□ -0.13
SCN3B-206ENST00000530277 FAM160A1Q05DH4 1040 aa14.23□□□□□ -0.13
SCN3B-206ENST00000530277 WASF1Q92558 559 aa14.23□□□□□ -0.13
SCN3B-206ENST00000530277 OSBP2Q969R2 916 aa14.23□□□□□ -0.13
SCN3B-206ENST00000530277 TM6SF1Q9BZW5 370 aa14.23□□□□□ -0.13
SCN3B-206ENST00000530277 A0A0G2JLW4 131 aa14.22□□□□□ -0.13
SCN3B-206ENST00000530277 FAM170AA1A519 330 aa14.22□□□□□ -0.13
SCN3B-206ENST00000530277 KRT18P05783 430 aaKnown RBP14.22□□□□□ -0.13
SCN3B-206ENST00000530277 PDIA4P13667 645 aaKnown RBP14.22□□□□□ -0.13
SCN3B-206ENST00000530277 GOLGA8FQ08AF8 430 aa14.22□□□□□ -0.13
SCN3B-206ENST00000530277 GOLGA8DPQ0D2H9 430 aa14.22□□□□□ -0.13
SCN3B-206ENST00000530277 ARID5BQ14865 1188 aa14.22□□□□□ -0.13
SCN3B-206ENST00000530277 NBPF5PQ86XG9 351 aaPredicted RBP14.22□□□□□ -0.13
SCN3B-206ENST00000530277 APPBP2Q92624 585 aa14.22□□□□□ -0.13
SCN3B-206ENST00000530277 CCDC196A0A1B0GTZ2 297 aa14.22□□□□□ -0.13
SCN3B-206ENST00000530277 CBFA2T2O43439 604 aa14.22□□□□□ -0.13
SCN3B-206ENST00000530277 EPB41L2O43491 1005 aaKnown RBP14.22□□□□□ -0.13
SCN3B-206ENST00000530277 IDEP14735 1019 aa14.22□□□□□ -0.13
SCN3B-206ENST00000530277 CRB1P82279 1406 aa14.22□□□□□ -0.13
SCN3B-206ENST00000530277 KIF4BQ2VIQ3 1234 aa14.22□□□□□ -0.13
SCN3B-206ENST00000530277 IFIT1BQ5T764 474 aaKnown RBP14.22□□□□□ -0.13
SCN3B-206ENST00000530277 SOGA3Q5TF21 947 aa14.22□□□□□ -0.13
SCN3B-206ENST00000530277 NAA16Q6N069 864 aaPredicted RBP14.22□□□□□ -0.13
SCN3B-206ENST00000530277 SMIM5Q71RC9 77 aa14.22□□□□□ -0.13
SCN3B-206ENST00000530277 UTP14AQ9BVJ6 771 aaKnown RBP14.22□□□□□ -0.13
SCN3B-206ENST00000530277 ABCA9Q8IUA7 1624 aa14.21□□□□□ -0.13
SCN3B-206ENST00000530277 ADCY9O60503 1353 aa14.21□□□□□ -0.13
SCN3B-206ENST00000530277 ZNF174Q15697 407 aa14.21□□□□□ -0.13
SCN3B-206ENST00000530277 C8orf37Q96NL8 207 aa14.21□□□□□ -0.13
SCN3B-206ENST00000530277 HAUS7Q99871 368 aa14.21□□□□□ -0.13
SCN3B-206ENST00000530277 COPRSQ9NQ92 184 aa14.21□□□□□ -0.13
SCN3B-206ENST00000530277 HELLSQ9NRZ9 838 aa14.21□□□□□ -0.13
SCN3B-206ENST00000530277 PPP1R1BQ9UD71 204 aaPredicted RBP14.21□□□□□ -0.13
SCN3B-206ENST00000530277 CLIC4Q9Y696 253 aa14.21□□□□□ -0.13
SCN3B-206ENST00000530277 TMEM94Q12767 1356 aa14.21□□□□□ -0.13
SCN3B-206ENST00000530277 BCAMP50895 628 aa14.21□□□□□ -0.13
SCN3B-206ENST00000530277 ZNF75DP51815 510 aa14.21□□□□□ -0.13
SCN3B-206ENST00000530277 CCDC152Q4G0S7 254 aa14.21□□□□□ -0.13
SCN3B-206ENST00000530277 ANKRD18AQ8IVF6 992 aa14.21□□□□□ -0.13
SCN3B-206ENST00000530277 PUS7LQ9H0K6 701 aaKnown RBP14.21□□□□□ -0.13
SCN3B-206ENST00000530277 LZTFL1Q9NQ48 299 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms