RNA–Protein interactions for RNA: ENST00000529848.1

SVIP-203, Transcript of small VCP interacting protein, humanhuman

TSL 5

Gene SVIP, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-203ENST00000529848 CDC27P30260 824 aa6.28□□□□□ -1.4
SVIP-203ENST00000529848 PPP2R3AQ06190 1150 aa6.28□□□□□ -1.4
SVIP-203ENST00000529848 PCDH1Q08174 1060 aa6.28□□□□□ -1.4
SVIP-203ENST00000529848 PWP1Q13610 501 aa6.28□□□□□ -1.4
SVIP-203ENST00000529848 ZNF394Q53GI3 561 aa6.28□□□□□ -1.4
SVIP-203ENST00000529848 NAALADL2Q58DX5 795 aa6.28□□□□□ -1.4
SVIP-203ENST00000529848 RELL1Q8IUW5 271 aa6.28□□□□□ -1.4
SVIP-203ENST00000529848 ZNF654Q8IZM8 581 aa6.28□□□□□ -1.4
SVIP-203ENST00000529848 GALNT6Q8NCL4 622 aa6.28□□□□□ -1.4
SVIP-203ENST00000529848 ADAM19Q9H013 955 aa6.28□□□□□ -1.4
SVIP-203ENST00000529848 SEC31BQ9NQW1 1179 aa6.28□□□□□ -1.4
SVIP-203ENST00000529848 SOX13Q9UN79 622 aa6.28□□□□□ -1.4
SVIP-203ENST00000529848 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.28□□□□□ -1.4
SVIP-203ENST00000529848 PCDHGB7Q9Y5F8 929 aa6.28□□□□□ -1.4
SVIP-203ENST00000529848 LILRB5O75023 590 aa6.27□□□□□ -1.41
SVIP-203ENST00000529848 CELA3AP09093 270 aa6.27□□□□□ -1.41
SVIP-203ENST00000529848 AMPD1P23109 780 aa6.27□□□□□ -1.41
SVIP-203ENST00000529848 MAP3K11Q16584 847 aa6.27□□□□□ -1.41
SVIP-203ENST00000529848 CHSY3Q70JA7 882 aa6.27□□□□□ -1.41
SVIP-203ENST00000529848 ERMP1Q7Z2K6 904 aa6.27□□□□□ -1.41
SVIP-203ENST00000529848 RSRP1Q9BUV0 290 aa6.27□□□□□ -1.41
SVIP-203ENST00000529848 DDX41Q9UJV9 622 aaKnown RBP6.27□□□□□ -1.41
SVIP-203ENST00000529848 STARD13Q9Y3M8 1113 aa6.27□□□□□ -1.41
SVIP-203ENST00000529848 OIP5O43482 229 aa6.26□□□□□ -1.41
SVIP-203ENST00000529848 ALBP02768 609 aa6.26□□□□□ -1.41
SVIP-203ENST00000529848 BCRP11274 1271 aa6.26□□□□□ -1.41
SVIP-203ENST00000529848 GBP2P32456 591 aaPredicted RBP6.26□□□□□ -1.41
SVIP-203ENST00000529848 ZNF157P51786 506 aaPredicted RBP6.26□□□□□ -1.41
SVIP-203ENST00000529848 FAAP100Q0VG06 881 aa6.26□□□□□ -1.41
SVIP-203ENST00000529848 GNL2Q13823 731 aaKnown RBP6.26□□□□□ -1.41
SVIP-203ENST00000529848 IKBKEQ14164 716 aa6.26□□□□□ -1.41
SVIP-203ENST00000529848 FAM117BQ6P1L5 589 aa6.26□□□□□ -1.41
SVIP-203ENST00000529848 C1orf229Q6ZS94 237 aaPredicted RBP6.26□□□□□ -1.41
SVIP-203ENST00000529848 IL22RA1Q8N6P7 574 aa6.26□□□□□ -1.41
SVIP-203ENST00000529848 DDX54Q8TDD1 881 aaKnown RBP6.26□□□□□ -1.41
SVIP-203ENST00000529848 NECAB3Q96P71 396 aaPredicted RBP6.26□□□□□ -1.41
SVIP-203ENST00000529848 TRIM56Q9BRZ2 755 aaKnown RBP6.26□□□□□ -1.41
SVIP-203ENST00000529848 ACBD3Q9H3P7 528 aa6.26□□□□□ -1.41
SVIP-203ENST00000529848 CAPN10Q9HC96 672 aa6.26□□□□□ -1.41
SVIP-203ENST00000529848 SH2B1Q9NRF2 756 aaPredicted RBP6.26□□□□□ -1.41
SVIP-203ENST00000529848 TMEM39AQ9NV64 488 aa6.26□□□□□ -1.41
SVIP-203ENST00000529848 KBTBD4Q9NVX7 518 aa6.26□□□□□ -1.41
SVIP-203ENST00000529848 SAMM50Q9Y512 469 aa6.26□□□□□ -1.41
SVIP-203ENST00000529848 H3BRJ5 948 aa6.25□□□□□ -1.41
SVIP-203ENST00000529848 M0R082 166 aa6.25□□□□□ -1.41
SVIP-203ENST00000529848 ENC1O14682 589 aa6.25□□□□□ -1.41
SVIP-203ENST00000529848 SLURP2P0DP57 97 aa6.25□□□□□ -1.41
SVIP-203ENST00000529848 ESRRAP11474 423 aaPredicted RBP6.25□□□□□ -1.41
SVIP-203ENST00000529848 LMNB1P20700 586 aa6.25□□□□□ -1.41
SVIP-203ENST00000529848 EPHA1P21709 976 aa6.25□□□□□ -1.41
SVIP-203ENST00000529848 CDC25BP30305 580 aa6.25□□□□□ -1.41
SVIP-203ENST00000529848 ARL4DP49703 201 aa6.25□□□□□ -1.41
SVIP-203ENST00000529848 LIG3P49916 1009 aa6.25□□□□□ -1.41
SVIP-203ENST00000529848 ADAMTSL4Q6UY14 1074 aa6.25□□□□□ -1.41
SVIP-203ENST00000529848 C20orf204Q6ZNR8 217 aa6.25□□□□□ -1.41
SVIP-203ENST00000529848 VN1R5Q7Z5H4 357 aa6.25□□□□□ -1.41
SVIP-203ENST00000529848 ZNF417Q8TAU3 575 aa6.25□□□□□ -1.41
SVIP-203ENST00000529848 ZNF587Q96SQ5 575 aaPredicted RBP6.25□□□□□ -1.41
SVIP-203ENST00000529848 COPRSQ9NQ92 184 aa6.25□□□□□ -1.41
SVIP-203ENST00000529848 LRRC4BQ9NT99 713 aa6.25□□□□□ -1.41
SVIP-203ENST00000529848 USP35Q9P2H5 1018 aa6.25□□□□□ -1.41
SVIP-203ENST00000529848 INPP5FQ9Y2H2 1132 aa6.25□□□□□ -1.41
SVIP-203ENST00000529848 PPME1Q9Y570 386 aa6.25□□□□□ -1.41
SVIP-203ENST00000529848 MINDY4BA8MYZ0 360 aa6.24□□□□□ -1.41
SVIP-203ENST00000529848 F6X3S4 739 aa6.24□□□□□ -1.41
SVIP-203ENST00000529848 B3GALT4O96024 378 aa6.24□□□□□ -1.41
SVIP-203ENST00000529848 AFF1P51825 1210 aaKnown RBP6.24□□□□□ -1.41
SVIP-203ENST00000529848 RACK1P63244 317 aaKnown RBP6.24□□□□□ -1.41
SVIP-203ENST00000529848 MAP3K10Q02779 954 aa6.24□□□□□ -1.41
SVIP-203ENST00000529848 GRIK5Q16478 980 aa6.24□□□□□ -1.41
SVIP-203ENST00000529848 TTBK2Q6IQ55 1244 aa6.24□□□□□ -1.41
SVIP-203ENST00000529848 WFDC8Q8IUA0 241 aa6.24□□□□□ -1.41
SVIP-203ENST00000529848 BTBD6Q96KE9 485 aa6.24□□□□□ -1.41
SVIP-203ENST00000529848 TMEM74Q96NL1 305 aa6.24□□□□□ -1.41
SVIP-203ENST00000529848 SRA1Q9HD15 236 aaKnown RBP6.24□□□□□ -1.41
SVIP-203ENST00000529848 SHISA8B8ZZ34 492 aa6.23□□□□□ -1.41
SVIP-203ENST00000529848 CELA2BP08218 269 aaPredicted RBP6.23□□□□□ -1.41
SVIP-203ENST00000529848 SF3A1Q15459 793 aaKnown RBP6.23□□□□□ -1.41
SVIP-203ENST00000529848 ZNF423Q2M1K9 1284 aa6.23□□□□□ -1.41
SVIP-203ENST00000529848 PCNX4Q63HM2 1172 aa6.23□□□□□ -1.41
SVIP-203ENST00000529848 MSL1Q68DK7 614 aa6.23□□□□□ -1.41
SVIP-203ENST00000529848 LYPD4Q6UWN0 246 aa6.23□□□□□ -1.41
SVIP-203ENST00000529848 C8orf86Q6ZUL3 223 aa6.23□□□□□ -1.41
SVIP-203ENST00000529848 SREK1Q8WXA9 508 aaKnown RBP6.23□□□□□ -1.41
SVIP-203ENST00000529848 SLC7A3Q8WY07 619 aa6.23□□□□□ -1.41
SVIP-203ENST00000529848 LINC01387J3KSC0 135 aa6.22□□□□□ -1.41
SVIP-203ENST00000529848 SOX1O00570 391 aaPredicted RBP6.22□□□□□ -1.41
SVIP-203ENST00000529848 EIF4EBP3O60516 100 aaPredicted RBP6.22□□□□□ -1.41
SVIP-203ENST00000529848 PAGE1O75459 146 aa6.22□□□□□ -1.41
SVIP-203ENST00000529848 NME2P22392 152 aa6.22□□□□□ -1.41
SVIP-203ENST00000529848 TNNI2P48788 182 aa6.22□□□□□ -1.41
SVIP-203ENST00000529848 RPS26P62854 115 aaKnown RBP6.22□□□□□ -1.41
SVIP-203ENST00000529848 PIP4K2BP78356 416 aa6.22□□□□□ -1.41
SVIP-203ENST00000529848 GSTM4Q03013 218 aa6.22□□□□□ -1.41
SVIP-203ENST00000529848 LRRC14Q15048 493 aa6.22□□□□□ -1.41
SVIP-203ENST00000529848 DIEXFQ68CQ4 756 aaKnown RBP6.22□□□□□ -1.41
SVIP-203ENST00000529848 TXNDC11Q6PKC3 985 aa6.22□□□□□ -1.41
SVIP-203ENST00000529848 KIAA0825Q8IV33 1275 aa6.22□□□□□ -1.41
SVIP-203ENST00000529848 SULF2Q8IWU5 870 aa6.22□□□□□ -1.41
SVIP-203ENST00000529848 PHC3Q8NDX5 983 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms