RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 MYH3P11055 1940 aa17.23■□□□□ 0.35
HIF3A-212ENST00000529205 SPEF2Q9C093 1822 aa17.22■□□□□ 0.35
HIF3A-212ENST00000529205 F8W031 263 aaPredicted RBP17.22■□□□□ 0.35
HIF3A-212ENST00000529205 FKBP1AP62942 108 aaKnown RBP17.22■□□□□ 0.35
HIF3A-212ENST00000529205 TWISTNBQ3B726 338 aaPredicted RBP17.22■□□□□ 0.35
HIF3A-212ENST00000529205 CFAP100Q494V2 611 aa17.22■□□□□ 0.35
HIF3A-212ENST00000529205 ANKRD13AQ8IZ07 590 aa17.22■□□□□ 0.35
HIF3A-212ENST00000529205 EFCC1Q9HA90 598 aa17.22■□□□□ 0.35
HIF3A-212ENST00000529205 VEZTQ9HBM0 779 aa17.22■□□□□ 0.35
HIF3A-212ENST00000529205 PTPN22Q9Y2R2 807 aa17.22■□□□□ 0.35
HIF3A-212ENST00000529205 IGF2BP3O00425 579 aaKnown RBP eCLIP17.21■□□□□ 0.35
HIF3A-212ENST00000529205 IFIT5Q13325 482 aaKnown RBP17.21■□□□□ 0.35
HIF3A-212ENST00000529205 TNFAIP1Q13829 316 aa17.21■□□□□ 0.35
HIF3A-212ENST00000529205 C15orf52Q6ZUT6 534 aaKnown RBP17.21■□□□□ 0.35
HIF3A-212ENST00000529205 LINS1Q8NG48 757 aa17.21■□□□□ 0.35
HIF3A-212ENST00000529205 CLMNQ96JQ2 1002 aa17.21■□□□□ 0.35
HIF3A-212ENST00000529205 TMEM106CQ9BVX2 250 aa17.21■□□□□ 0.35
HIF3A-212ENST00000529205 PRKRIP1Q9H875 184 aaPredicted RBP17.21■□□□□ 0.35
HIF3A-212ENST00000529205 CLRN2A0PK11 232 aa17.2■□□□□ 0.34
HIF3A-212ENST00000529205 SPDYE2BA6NHP3 402 aa17.2■□□□□ 0.34
HIF3A-212ENST00000529205 SPDYE6P0CI01 402 aa17.2■□□□□ 0.34
HIF3A-212ENST00000529205 SP3Q02447 781 aa17.2■□□□□ 0.34
HIF3A-212ENST00000529205 FKBP5Q13451 457 aaPredicted RBP17.2■□□□□ 0.34
HIF3A-212ENST00000529205 HABP4Q5JVS0 413 aaKnown RBP17.2■□□□□ 0.34
HIF3A-212ENST00000529205 CD99L2Q8TCZ2 262 aa17.2■□□□□ 0.34
HIF3A-212ENST00000529205 DNAAF4Q8WXU2 420 aa17.2■□□□□ 0.34
HIF3A-212ENST00000529205 TSR2Q969E8 191 aaKnown RBP17.2■□□□□ 0.34
HIF3A-212ENST00000529205 CHMP3Q9Y3E7 222 aa17.2■□□□□ 0.34
HIF3A-212ENST00000529205 POTEFA5A3E0 1075 aa17.19■□□□□ 0.34
HIF3A-212ENST00000529205 TAF5LO75529 589 aa17.19■□□□□ 0.34
HIF3A-212ENST00000529205 WDHD1O75717 1129 aaPredicted RBP17.19■□□□□ 0.34
HIF3A-212ENST00000529205 IL1R1P14778 569 aa17.19■□□□□ 0.34
HIF3A-212ENST00000529205 FLIIQ13045 1269 aa17.19■□□□□ 0.34
HIF3A-212ENST00000529205 CRHR2Q13324 411 aa17.19■□□□□ 0.34
HIF3A-212ENST00000529205 NBPF12Q5TAG4 269 aaPredicted RBP17.19■□□□□ 0.34
HIF3A-212ENST00000529205 G2E3Q7L622 706 aa17.19■□□□□ 0.34
HIF3A-212ENST00000529205 CERS5Q8N5B7 392 aa17.19■□□□□ 0.34
HIF3A-212ENST00000529205 PRMT6Q96LA8 375 aaPredicted RBP17.19■□□□□ 0.34
HIF3A-212ENST00000529205 ZNF646O15015 1829 aaPredicted RBP17.19■□□□□ 0.34
HIF3A-212ENST00000529205 USP2O75604 605 aaPredicted RBP17.18■□□□□ 0.34
HIF3A-212ENST00000529205 RASA3Q14644 834 aa17.18■□□□□ 0.34
HIF3A-212ENST00000529205 TAF7LQ5H9L4 462 aa17.18■□□□□ 0.34
HIF3A-212ENST00000529205 NBPF11Q86T75 865 aa17.18■□□□□ 0.34
HIF3A-212ENST00000529205 HELBQ8NG08 1087 aaPredicted RBP17.18■□□□□ 0.34
HIF3A-212ENST00000529205 CASP7P55210 303 aa17.17■□□□□ 0.34
HIF3A-212ENST00000529205 CCDC57Q2TAC2 916 aa17.17■□□□□ 0.34
HIF3A-212ENST00000529205 ARMC5Q96C12 935 aa17.17■□□□□ 0.34
HIF3A-212ENST00000529205 TESPA1A2RU30 521 aaPredicted RBP17.16■□□□□ 0.34
HIF3A-212ENST00000529205 TNNI2P48788 182 aa17.16■□□□□ 0.34
HIF3A-212ENST00000529205 CCDC27Q2M243 656 aa17.16■□□□□ 0.34
HIF3A-212ENST00000529205 OPTNQ96CV9 577 aa17.16■□□□□ 0.34
HIF3A-212ENST00000529205 ZFYVE28Q9HCC9 887 aa17.16■□□□□ 0.34
HIF3A-212ENST00000529205 SSC5DA1L4H1 1573 aa17.15■□□□□ 0.34
HIF3A-212ENST00000529205 SNAP23O00161 211 aa17.15■□□□□ 0.34
HIF3A-212ENST00000529205 PLIN1O60240 522 aa17.15■□□□□ 0.34
HIF3A-212ENST00000529205 LDHAL6AQ6ZMR3 332 aa17.15■□□□□ 0.34
HIF3A-212ENST00000529205 ELP3Q9H9T3 547 aa17.15■□□□□ 0.34
HIF3A-212ENST00000529205 CNNM1Q9NRU3 951 aa17.15■□□□□ 0.34
HIF3A-212ENST00000529205 PCDHAC2Q9Y5I4 1007 aa17.15■□□□□ 0.34
HIF3A-212ENST00000529205 EN2P19622 333 aaPredicted RBP17.14■□□□□ 0.33
HIF3A-212ENST00000529205 GTF2A2P52657 109 aa17.14■□□□□ 0.33
HIF3A-212ENST00000529205 SERPINA10Q9UK55 444 aa17.14■□□□□ 0.33
HIF3A-212ENST00000529205 JAG2Q9Y219 1238 aa17.14■□□□□ 0.33
HIF3A-212ENST00000529205 CSADQ9Y600 493 aa17.14■□□□□ 0.33
HIF3A-212ENST00000529205 IRS2Q9Y4H2 1338 aa17.14■□□□□ 0.33
HIF3A-212ENST00000529205 ECM29Q5VYK3 1845 aa17.13■□□□□ 0.33
HIF3A-212ENST00000529205 GJA5P36382 358 aa17.13■□□□□ 0.33
HIF3A-212ENST00000529205 FOXO4P98177 505 aa17.13■□□□□ 0.33
HIF3A-212ENST00000529205 TAF1CQ15572 869 aaPredicted RBP17.13■□□□□ 0.33
HIF3A-212ENST00000529205 SLC4A8Q2Y0W8 1093 aa17.13■□□□□ 0.33
HIF3A-212ENST00000529205 SLC9C1Q4G0N8 1177 aa17.13■□□□□ 0.33
HIF3A-212ENST00000529205 MFSD14BQ5SR56 506 aa17.13■□□□□ 0.33
HIF3A-212ENST00000529205 WWC1Q8IX03 1113 aa17.13■□□□□ 0.33
HIF3A-212ENST00000529205 PTPN18Q99952 460 aa17.13■□□□□ 0.33
HIF3A-212ENST00000529205 ZNF70Q9UC06 446 aaPredicted RBP17.13■□□□□ 0.33
HIF3A-212ENST00000529205 TTF2Q9UNY4 1162 aaKnown RBP17.13■□□□□ 0.33
HIF3A-212ENST00000529205 IL16Q14005 1332 aa17.13■□□□□ 0.33
HIF3A-212ENST00000529205 CCL15-CCL14A0A0B4J2E2 113 aa17.12■□□□□ 0.33
HIF3A-212ENST00000529205 MAP3K9P80192 1104 aa17.12■□□□□ 0.33
HIF3A-212ENST00000529205 KIF22Q14807 665 aa17.12■□□□□ 0.33
HIF3A-212ENST00000529205 CCL15Q16663 113 aa17.12■□□□□ 0.33
HIF3A-212ENST00000529205 SPDYE2Q495Y8 402 aa17.12■□□□□ 0.33
HIF3A-212ENST00000529205 LMBR1LQ6UX01 489 aa17.12■□□□□ 0.33
HIF3A-212ENST00000529205 TDRD3Q9H7E2 651 aaKnown RBP17.12■□□□□ 0.33
HIF3A-212ENST00000529205 FAM205AQ6ZU69 1335 aa17.12■□□□□ 0.33
HIF3A-212ENST00000529205 HIBADHP31937 336 aaKnown RBP17.11■□□□□ 0.33
HIF3A-212ENST00000529205 ZNF333Q96JL9 665 aa17.11■□□□□ 0.33
HIF3A-212ENST00000529205 TCP10L2B9ZVM9 353 aa17.1■□□□□ 0.33
HIF3A-212ENST00000529205 UBE4AQ14139 1066 aa17.1■□□□□ 0.33
HIF3A-212ENST00000529205 DZIP1LQ8IYY4 767 aaKnown RBP17.1■□□□□ 0.33
HIF3A-212ENST00000529205 TDRD7Q8NHU6 1098 aaKnown RBP17.1■□□□□ 0.33
HIF3A-212ENST00000529205 MS4A4AQ96JQ5 239 aa17.1■□□□□ 0.33
HIF3A-212ENST00000529205 C9orf78Q9NZ63 289 aaPredicted RBP17.1■□□□□ 0.33
HIF3A-212ENST00000529205 LAMB1P07942 1786 aa17.1■□□□□ 0.33
HIF3A-212ENST00000529205 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.09■□□□□ 0.33
HIF3A-212ENST00000529205 VPS37DQ86XT2 251 aa17.09■□□□□ 0.33
HIF3A-212ENST00000529205 HOOK2Q96ED9 719 aa17.09■□□□□ 0.33
HIF3A-212ENST00000529205 OTUD5Q96G74 571 aa17.09■□□□□ 0.33
HIF3A-212ENST00000529205 ZNF594Q96JF6 807 aaPredicted RBP17.09■□□□□ 0.33
HIF3A-212ENST00000529205 PTCH2Q9Y6C5 1203 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms