RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 TSPYL6Q8N831 410 aa24.44■■□□□ 1.5
SSRP1-204ENST00000529002 CD209Q9NNX6 404 aa24.44■■□□□ 1.5
SSRP1-204ENST00000529002 A0A1B0GUL6 1792 aa24.44■■□□□ 1.5
SSRP1-204ENST00000529002 PPP1R12BO60237 982 aaPredicted RBP24.43■■□□□ 1.5
SSRP1-204ENST00000529002 USP2O75604 605 aaPredicted RBP24.43■■□□□ 1.5
SSRP1-204ENST00000529002 KSR2Q6VAB6 950 aa24.43■■□□□ 1.5
SSRP1-204ENST00000529002 VEZTQ9HBM0 779 aa24.43■■□□□ 1.5
SSRP1-204ENST00000529002 JAG2Q9Y219 1238 aa24.43■■□□□ 1.5
SSRP1-204ENST00000529002 MYBBP1AQ9BQG0 1328 aaKnown RBP24.42■■□□□ 1.5
SSRP1-204ENST00000529002 MYCP01106 439 aaPredicted RBP24.42■■□□□ 1.5
SSRP1-204ENST00000529002 ITGA6P23229 1130 aa24.42■■□□□ 1.5
SSRP1-204ENST00000529002 MMP14P50281 582 aa24.42■■□□□ 1.5
SSRP1-204ENST00000529002 SP3Q02447 781 aa24.42■■□□□ 1.5
SSRP1-204ENST00000529002 CFAP100Q494V2 611 aa24.42■■□□□ 1.5
SSRP1-204ENST00000529002 PRMT6Q96LA8 375 aaPredicted RBP24.42■■□□□ 1.5
SSRP1-204ENST00000529002 IFT57Q9NWB7 429 aa24.42■■□□□ 1.5
SSRP1-204ENST00000529002 NEURL1BA8MQ27 555 aa24.41■■□□□ 1.5
SSRP1-204ENST00000529002 CHRNDQ07001 517 aa24.41■■□□□ 1.5
SSRP1-204ENST00000529002 HELBQ8NG08 1087 aaPredicted RBP24.41■■□□□ 1.5
SSRP1-204ENST00000529002 H7C1W4 665 aa24.4■■□□□ 1.5
SSRP1-204ENST00000529002 TAF5LO75529 589 aa24.4■■□□□ 1.5
SSRP1-204ENST00000529002 KCNJ4P48050 445 aa24.4■■□□□ 1.5
SSRP1-204ENST00000529002 GNAI1P63096 354 aa24.4■■□□□ 1.5
SSRP1-204ENST00000529002 CCDC30Q5VVM6 783 aa24.4■■□□□ 1.5
SSRP1-204ENST00000529002 ZNF333Q96JL9 665 aa24.4■■□□□ 1.5
SSRP1-204ENST00000529002 ANKRD2Q9GZV1 360 aa24.4■■□□□ 1.5
SSRP1-204ENST00000529002 ELP3Q9H9T3 547 aa24.4■■□□□ 1.5
SSRP1-204ENST00000529002 PTCH2Q9Y6C5 1203 aa24.4■■□□□ 1.5
SSRP1-204ENST00000529002 IRS2Q9Y4H2 1338 aa24.39■■□□□ 1.5
SSRP1-204ENST00000529002 APAF1O14727 1248 aa24.39■■□□□ 1.49
SSRP1-204ENST00000529002 G2E3Q7L622 706 aa24.39■■□□□ 1.49
SSRP1-204ENST00000529002 MTMR14Q8NCE2 650 aa24.39■■□□□ 1.49
SSRP1-204ENST00000529002 CNKSR2Q8WXI2 1034 aa24.39■■□□□ 1.49
SSRP1-204ENST00000529002 MPHOSPH8Q99549 860 aa24.39■■□□□ 1.49
SSRP1-204ENST00000529002 TMEM106CQ9BVX2 250 aa24.39■■□□□ 1.49
SSRP1-204ENST00000529002 SPDYE2BA6NHP3 402 aa24.38■■□□□ 1.49
SSRP1-204ENST00000529002 SPDYE6P0CI01 402 aa24.38■■□□□ 1.49
SSRP1-204ENST00000529002 IREB2P48200 963 aaKnown RBP24.38■■□□□ 1.49
SSRP1-204ENST00000529002 SUPT20HL1Q3ZLR7 823 aa24.38■■□□□ 1.49
SSRP1-204ENST00000529002 OTUD7BQ6GQQ9 843 aa24.38■■□□□ 1.49
SSRP1-204ENST00000529002 CDAN1Q8IWY9 1227 aa24.38■■□□□ 1.49
SSRP1-204ENST00000529002 PPP2R3BQ9Y5P8 575 aa24.38■■□□□ 1.49
SSRP1-204ENST00000529002 TESPA1A2RU30 521 aaPredicted RBP24.37■■□□□ 1.49
SSRP1-204ENST00000529002 NEXNQ0ZGT2 675 aa24.37■■□□□ 1.49
SSRP1-204ENST00000529002 RASA3Q14644 834 aa24.37■■□□□ 1.49
SSRP1-204ENST00000529002 ANKRD13AQ8IZ07 590 aa24.36■■□□□ 1.49
SSRP1-204ENST00000529002 OPTNQ96CV9 577 aa24.36■■□□□ 1.49
SSRP1-204ENST00000529002 MS4A4AQ96JQ5 239 aa24.36■■□□□ 1.49
SSRP1-204ENST00000529002 H0YGN5 161 aa24.35■■□□□ 1.49
SSRP1-204ENST00000529002 RBM5P52756 815 aaKnown RBP eCLIP24.35■■□□□ 1.49
SSRP1-204ENST00000529002 CASP7P55210 303 aa24.35■■□□□ 1.49
SSRP1-204ENST00000529002 BRI3BPQ8WY22 251 aa24.35■■□□□ 1.49
SSRP1-204ENST00000529002 MYO1BO43795 1136 aa24.34■■□□□ 1.49
SSRP1-204ENST00000529002 SLC4A8Q2Y0W8 1093 aa24.34■■□□□ 1.49
SSRP1-204ENST00000529002 SLC9C1Q4G0N8 1177 aa24.34■■□□□ 1.49
SSRP1-204ENST00000529002 PLA2G12BQ9BX93 195 aa24.34■■□□□ 1.49
SSRP1-204ENST00000529002 CSF1RP07333 972 aa24.33■■□□□ 1.49
SSRP1-204ENST00000529002 GCKRQ14397 625 aa24.33■■□□□ 1.49
SSRP1-204ENST00000529002 TAF1CQ15572 869 aaPredicted RBP24.33■■□□□ 1.49
SSRP1-204ENST00000529002 ARHGAP39Q9C0H5 1083 aa24.33■■□□□ 1.49
SSRP1-204ENST00000529002 UNCXA6NJT0 531 aa24.32■■□□□ 1.48
SSRP1-204ENST00000529002 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.32■■□□□ 1.48
SSRP1-204ENST00000529002 FAM43AQ8N2R8 423 aa24.32■■□□□ 1.48
SSRP1-204ENST00000529002 SH3TC2Q8TF17 1288 aa24.32■■□□□ 1.48
SSRP1-204ENST00000529002 TSR2Q969E8 191 aaKnown RBP24.32■■□□□ 1.48
SSRP1-204ENST00000529002 SZT2Q5T011 3432 aa24.32■■□□□ 1.48
SSRP1-204ENST00000529002 ECM2O94769 699 aaPredicted RBP24.31■■□□□ 1.48
SSRP1-204ENST00000529002 IL1R1P14778 569 aa24.31■■□□□ 1.48
SSRP1-204ENST00000529002 DDX10Q13206 875 aaKnown RBP24.31■■□□□ 1.48
SSRP1-204ENST00000529002 OTUD5Q96G74 571 aa24.31■■□□□ 1.48
SSRP1-204ENST00000529002 CCL15-CCL14A0A0B4J2E2 113 aa24.3■■□□□ 1.48
SSRP1-204ENST00000529002 CCL15Q16663 113 aa24.3■■□□□ 1.48
SSRP1-204ENST00000529002 TDRD3Q9H7E2 651 aaKnown RBP24.3■■□□□ 1.48
SSRP1-204ENST00000529002 ZNF70Q9UC06 446 aaPredicted RBP24.3■■□□□ 1.48
SSRP1-204ENST00000529002 C15orf52Q6ZUT6 534 aaKnown RBP24.29■■□□□ 1.48
SSRP1-204ENST00000529002 NBPF11Q86T75 865 aa24.29■■□□□ 1.48
SSRP1-204ENST00000529002 TEPSINQ96N21 525 aa24.29■■□□□ 1.48
SSRP1-204ENST00000529002 ARAP2Q8WZ64 1704 aa24.29■■□□□ 1.48
SSRP1-204ENST00000529002 ANKRD18BA2A2Z9 1011 aa24.28■■□□□ 1.48
SSRP1-204ENST00000529002 CALD1Q05682 793 aaKnown RBP24.28■■□□□ 1.48
SSRP1-204ENST00000529002 SPDYE2Q495Y8 402 aa24.28■■□□□ 1.48
SSRP1-204ENST00000529002 ZNF804AQ7Z570 1209 aa24.28■■□□□ 1.48
SSRP1-204ENST00000529002 STK31Q9BXU1 1019 aa24.28■■□□□ 1.48
SSRP1-204ENST00000529002 ZFYVE28Q9HCC9 887 aa24.28■■□□□ 1.48
SSRP1-204ENST00000529002 PLIN1O60240 522 aa24.27■■□□□ 1.48
SSRP1-204ENST00000529002 VGLL4Q14135 290 aa24.27■■□□□ 1.48
SSRP1-204ENST00000529002 CHRDL2Q6WN34 429 aa24.27■■□□□ 1.48
SSRP1-204ENST00000529002 ZNF594Q96JF6 807 aaPredicted RBP24.27■■□□□ 1.48
SSRP1-204ENST00000529002 TMEM39BQ9GZU3 492 aa24.27■■□□□ 1.48
SSRP1-204ENST00000529002 TCP10L2B9ZVM9 353 aa24.26■■□□□ 1.47
SSRP1-204ENST00000529002 SLC4A2P04920 1241 aa24.26■■□□□ 1.47
SSRP1-204ENST00000529002 FKBP1AP62942 108 aaKnown RBP24.26■■□□□ 1.47
SSRP1-204ENST00000529002 CHMP3Q9Y3E7 222 aa24.26■■□□□ 1.47
SSRP1-204ENST00000529002 GTF2A2P52657 109 aa24.24■■□□□ 1.47
SSRP1-204ENST00000529002 MAP3K9P80192 1104 aa24.24■■□□□ 1.47
SSRP1-204ENST00000529002 FOXO4P98177 505 aa24.24■■□□□ 1.47
SSRP1-204ENST00000529002 TTF2Q9UNY4 1162 aaKnown RBP24.24■■□□□ 1.47
SSRP1-204ENST00000529002 MTFR1Q15390 333 aa24.23■■□□□ 1.47
SSRP1-204ENST00000529002 MFSD14BQ5SR56 506 aa24.23■■□□□ 1.47
SSRP1-204ENST00000529002 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms