RNA–Protein interactions for RNA: ENST00000528748.5

CDC27-206, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-206ENST00000528748 PTPN5P54829 565 aa13.69□□□□□ -0.22
CDC27-206ENST00000528748 ATP8B2P98198 1209 aa13.69□□□□□ -0.22
CDC27-206ENST00000528748 IFIT5Q13325 482 aaKnown RBP13.69□□□□□ -0.22
CDC27-206ENST00000528748 FAM161AQ3B820 660 aa13.69□□□□□ -0.22
CDC27-206ENST00000528748 PRPF40BQ6NWY9 871 aaKnown RBP13.69□□□□□ -0.22
CDC27-206ENST00000528748 C7orf43Q8WVR3 580 aa13.69□□□□□ -0.22
CDC27-206ENST00000528748 CDC5LQ99459 802 aaKnown RBP13.69□□□□□ -0.22
CDC27-206ENST00000528748 C1orf115Q9H7X2 142 aa13.69□□□□□ -0.22
CDC27-206ENST00000528748 WWC3Q9ULE0 1092 aa13.69□□□□□ -0.22
CDC27-206ENST00000528748 BCS1LQ9Y276 419 aa13.69□□□□□ -0.22
CDC27-206ENST00000528748 BRCA1P38398 1863 aaKnown RBP13.68□□□□□ -0.22
CDC27-206ENST00000528748 MTX1Q13505 466 aa13.68□□□□□ -0.22
CDC27-206ENST00000528748 ANKRD18AQ8IVF6 992 aa13.68□□□□□ -0.22
CDC27-206ENST00000528748 SLX4Q8IY92 1834 aa13.68□□□□□ -0.22
CDC27-206ENST00000528748 RFX5P48382 616 aaPredicted RBP13.67□□□□□ -0.22
CDC27-206ENST00000528748 TMC4Q7Z404 712 aa13.67□□□□□ -0.22
CDC27-206ENST00000528748 SP8Q8IXZ3 490 aa13.67□□□□□ -0.22
CDC27-206ENST00000528748 ATP6V0A2Q9Y487 856 aa13.67□□□□□ -0.22
CDC27-206ENST00000528748 PNMA6EA0A0J9YXQ4 647 aa13.66□□□□□ -0.22
CDC27-206ENST00000528748 PPEF1O14829 653 aaPredicted RBP13.66□□□□□ -0.22
CDC27-206ENST00000528748 SRGAP3O43295 1099 aa13.66□□□□□ -0.22
CDC27-206ENST00000528748 C21orf2O43822 256 aa13.66□□□□□ -0.22
CDC27-206ENST00000528748 IGHMBP2P38935 993 aaKnown RBP13.66□□□□□ -0.22
CDC27-206ENST00000528748 CEP85Q6P2H3 762 aa13.66□□□□□ -0.22
CDC27-206ENST00000528748 RPAP2Q8IXW5 612 aaPredicted RBP13.66□□□□□ -0.22
CDC27-206ENST00000528748 EXOC6Q8TAG9 804 aa13.66□□□□□ -0.22
CDC27-206ENST00000528748 ZNF594Q96JF6 807 aaPredicted RBP13.66□□□□□ -0.22
CDC27-206ENST00000528748 BSDC1Q9NW68 430 aaPredicted RBP13.66□□□□□ -0.22
CDC27-206ENST00000528748 FAM198AQ9UFP1 575 aa13.66□□□□□ -0.22
CDC27-206ENST00000528748 YBX3P16989 372 aaKnown RBP eCLIP13.65□□□□□ -0.22
CDC27-206ENST00000528748 IRX6P78412 446 aaPredicted RBP13.65□□□□□ -0.22
CDC27-206ENST00000528748 PTPN12Q05209 780 aaKnown RBP13.65□□□□□ -0.22
CDC27-206ENST00000528748 PTGDRQ13258 359 aa13.65□□□□□ -0.22
CDC27-206ENST00000528748 AAMPQ13685 434 aa13.65□□□□□ -0.22
CDC27-206ENST00000528748 GPR162Q16538 588 aa13.65□□□□□ -0.22
CDC27-206ENST00000528748 TAF7LQ5H9L4 462 aa13.65□□□□□ -0.22
CDC27-206ENST00000528748 CC2D2BQ6DHV5 1058 aa13.65□□□□□ -0.22
CDC27-206ENST00000528748 PADI6Q6TGC4 694 aa13.65□□□□□ -0.22
CDC27-206ENST00000528748 SSH3Q8TE77 659 aa13.65□□□□□ -0.22
CDC27-206ENST00000528748 TATDN2Q93075 761 aa13.65□□□□□ -0.22
CDC27-206ENST00000528748 MPHOSPH8Q99549 860 aa13.65□□□□□ -0.22
CDC27-206ENST00000528748 PNMA3Q9UL41 463 aa13.65□□□□□ -0.22
CDC27-206ENST00000528748 COL4A1P02462 1669 aa13.65□□□□□ -0.22
CDC27-206ENST00000528748 CACNA1SQ13698 1873 aa13.65□□□□□ -0.22
CDC27-206ENST00000528748 OLFM4Q6UX06 510 aa13.64□□□□□ -0.23
CDC27-206ENST00000528748 LDHAL6AQ6ZMR3 332 aa13.64□□□□□ -0.23
CDC27-206ENST00000528748 TMX4Q9H1E5 349 aaPredicted RBP13.64□□□□□ -0.23
CDC27-206ENST00000528748 MINPP1Q9UNW1 487 aa13.64□□□□□ -0.23
CDC27-206ENST00000528748 ARFGEF1Q9Y6D6 1849 aa13.63□□□□□ -0.23
CDC27-206ENST00000528748 SOWAHBA6NEL2 793 aa13.63□□□□□ -0.23
CDC27-206ENST00000528748 GRIPAP1Q4V328 841 aa13.63□□□□□ -0.23
CDC27-206ENST00000528748 SOGA3Q5TF21 947 aa13.63□□□□□ -0.23
CDC27-206ENST00000528748 SIRT2Q8IXJ6 389 aa13.63□□□□□ -0.23
CDC27-206ENST00000528748 TTC13Q8NBP0 860 aa13.63□□□□□ -0.23
CDC27-206ENST00000528748 KLHDC4Q8TBB5 520 aa13.63□□□□□ -0.23
CDC27-206ENST00000528748 PUS3Q9BZE2 481 aaKnown RBP13.63□□□□□ -0.23
CDC27-206ENST00000528748 COPRSQ9NQ92 184 aa13.63□□□□□ -0.23
CDC27-206ENST00000528748 RIPOR2Q9Y4F9 1068 aa13.63□□□□□ -0.23
CDC27-206ENST00000528748 PCDHB15Q9Y5E8 787 aa13.63□□□□□ -0.23
CDC27-206ENST00000528748 GRIN3BO60391 1043 aa13.62□□□□□ -0.23
CDC27-206ENST00000528748 LRRC24Q50LG9 513 aa13.62□□□□□ -0.23
CDC27-206ENST00000528748 CCDC93Q567U6 631 aa13.62□□□□□ -0.23
CDC27-206ENST00000528748 SLC51AQ86UW1 340 aa13.62□□□□□ -0.23
CDC27-206ENST00000528748 RTKN2Q8IZC4 609 aa13.62□□□□□ -0.23
CDC27-206ENST00000528748 CNNM1Q9NRU3 951 aa13.62□□□□□ -0.23
CDC27-206ENST00000528748 PA2G4Q9UQ80 394 aaKnown RBP13.62□□□□□ -0.23
CDC27-206ENST00000528748 SRCAPQ6ZRS2 3230 aa13.62□□□□□ -0.23
CDC27-206ENST00000528748 EYA2O00167 538 aa13.61□□□□□ -0.23
CDC27-206ENST00000528748 SMAPO00193 183 aa13.61□□□□□ -0.23
CDC27-206ENST00000528748 GPSM2P81274 684 aa13.61□□□□□ -0.23
CDC27-206ENST00000528748 ARHGAP27Q6ZUM4 889 aa13.61□□□□□ -0.23
CDC27-206ENST00000528748 NUDT18Q6ZVK8 323 aa13.61□□□□□ -0.23
CDC27-206ENST00000528748 MPNDQ8N594 471 aa13.61□□□□□ -0.23
CDC27-206ENST00000528748 LRCH3Q96II8 777 aa13.61□□□□□ -0.23
CDC27-206ENST00000528748 PODXL2Q9NZ53 605 aa13.61□□□□□ -0.23
CDC27-206ENST00000528748 NSFL1CQ9UNZ2 370 aaKnown RBP13.61□□□□□ -0.23
CDC27-206ENST00000528748 HMMRO75330 724 aa13.6□□□□□ -0.23
CDC27-206ENST00000528748 CIAO1O76071 339 aa13.6□□□□□ -0.23
CDC27-206ENST00000528748 BCAMP50895 628 aa13.6□□□□□ -0.23
CDC27-206ENST00000528748 CHRNDQ07001 517 aa13.6□□□□□ -0.23
CDC27-206ENST00000528748 ATG9AQ7Z3C6 839 aa13.6□□□□□ -0.23
CDC27-206ENST00000528748 ANKRD2Q9GZV1 360 aa13.6□□□□□ -0.23
CDC27-206ENST00000528748 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.6□□□□□ -0.23
CDC27-206ENST00000528748 NOP58Q9Y2X3 529 aaKnown RBP13.6□□□□□ -0.23
CDC27-206ENST00000528748 SURF6O75683 361 aaKnown RBP13.59□□□□□ -0.23
CDC27-206ENST00000528748 G3BP1Q13283 466 aaKnown RBP eCLIP13.59□□□□□ -0.23
CDC27-206ENST00000528748 DPP8Q6V1X1 898 aaPredicted RBP13.59□□□□□ -0.23
CDC27-206ENST00000528748 HELBQ8NG08 1087 aaPredicted RBP13.59□□□□□ -0.23
CDC27-206ENST00000528748 RTFDC1Q9BY42 306 aaPredicted RBP13.59□□□□□ -0.23
CDC27-206ENST00000528748 SIL1Q9H173 461 aa13.59□□□□□ -0.23
CDC27-206ENST00000528748 ANKIB1Q9P2G1 1089 aa13.59□□□□□ -0.23
CDC27-206ENST00000528748 SPEF2Q9C093 1822 aa13.59□□□□□ -0.23
CDC27-206ENST00000528748 MROH5Q6ZUA9 1318 aa13.59□□□□□ -0.23
CDC27-206ENST00000528748 SNED1Q8TER0 1413 aa13.58□□□□□ -0.24
CDC27-206ENST00000528748 NFKBIEO00221 500 aa13.58□□□□□ -0.24
CDC27-206ENST00000528748 ATP2B4P23634 1241 aa13.58□□□□□ -0.24
CDC27-206ENST00000528748 IL15P40933 162 aaPredicted RBP13.58□□□□□ -0.24
CDC27-206ENST00000528748 FKBP4Q02790 459 aaKnown RBP eCLIP13.58□□□□□ -0.24
CDC27-206ENST00000528748 PSMD1Q99460 953 aa13.58□□□□□ -0.24
CDC27-206ENST00000528748 POLLQ9UGP5 575 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms